RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 CLIC4Q9Y696 253 aa19.3■□□□□ 0.68
PRKCSH-217ENST00000592741 ZBTB43O43298 467 aa19.29■□□□□ 0.68
PRKCSH-217ENST00000592741 KIF23Q02241 960 aaPredicted RBP19.29■□□□□ 0.68
PRKCSH-217ENST00000592741 SYNE3Q6ZMZ3 975 aa19.29■□□□□ 0.68
PRKCSH-217ENST00000592741 SGMS1Q86VZ5 419 aa19.29■□□□□ 0.68
PRKCSH-217ENST00000592741 IGDCC4Q8TDY8 1250 aa19.29■□□□□ 0.68
PRKCSH-217ENST00000592741 ALG1Q9BT22 464 aa19.29■□□□□ 0.68
PRKCSH-217ENST00000592741 KRT23Q9C075 422 aa19.29■□□□□ 0.68
PRKCSH-217ENST00000592741 PNPLA7Q6ZV29 1317 aa19.29■□□□□ 0.68
PRKCSH-217ENST00000592741 CLEC4GQ6UXB4 293 aa19.28■□□□□ 0.68
PRKCSH-217ENST00000592741 MICU3Q86XE3 530 aa19.28■□□□□ 0.68
PRKCSH-217ENST00000592741 LY9Q9HBG7 655 aa19.28■□□□□ 0.68
PRKCSH-217ENST00000592741 GOLGA8AA7E2F4 631 aa19.28■□□□□ 0.68
PRKCSH-217ENST00000592741 GSG1L2A8MUP6 293 aa19.28■□□□□ 0.68
PRKCSH-217ENST00000592741 SPTLC2O15270 562 aa19.28■□□□□ 0.68
PRKCSH-217ENST00000592741 CTDSPL2Q05D32 466 aa19.28■□□□□ 0.68
PRKCSH-217ENST00000592741 AKNAD1Q5T1N1 836 aa19.28■□□□□ 0.68
PRKCSH-217ENST00000592741 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.28■□□□□ 0.68
PRKCSH-217ENST00000592741 LTBP4Q8N2S1 1624 aa19.27■□□□□ 0.68
PRKCSH-217ENST00000592741 KIF28PB7ZC32 967 aa19.27■□□□□ 0.68
PRKCSH-217ENST00000592741 GOLGA6L19H0YKK7 550 aa19.27■□□□□ 0.68
PRKCSH-217ENST00000592741 RXRAP19793 462 aa19.27■□□□□ 0.68
PRKCSH-217ENST00000592741 LIFRP42702 1097 aa19.27■□□□□ 0.68
PRKCSH-217ENST00000592741 TDO2P48775 406 aa19.27■□□□□ 0.68
PRKCSH-217ENST00000592741 NOLC1Q14978 699 aaKnown RBP eCLIP19.27■□□□□ 0.681e-10■□□□□ 9.6
PRKCSH-217ENST00000592741 TRIM5Q9C035 493 aa19.27■□□□□ 0.68
PRKCSH-217ENST00000592741 GJB4Q9NTQ9 266 aa19.27■□□□□ 0.68
PRKCSH-217ENST00000592741 LRP2BPQ9P2M1 347 aa19.27■□□□□ 0.68
PRKCSH-217ENST00000592741 SLC4A4Q9Y6R1 1079 aa19.27■□□□□ 0.68
PRKCSH-217ENST00000592741 ZNF831Q5JPB2 1677 aa19.27■□□□□ 0.68
PRKCSH-217ENST00000592741 BCL9LQ86UU0 1499 aa19.27■□□□□ 0.67
PRKCSH-217ENST00000592741 IFIT3O14879 490 aaKnown RBP19.27■□□□□ 0.67
PRKCSH-217ENST00000592741 ZNF75DP51815 510 aa19.27■□□□□ 0.67
PRKCSH-217ENST00000592741 ANO1Q5XXA6 986 aa19.27■□□□□ 0.67
PRKCSH-217ENST00000592741 MFSD6Q6ZSS7 791 aa19.27■□□□□ 0.67
PRKCSH-217ENST00000592741 PLA2G4DQ86XP0 818 aa19.27■□□□□ 0.67
PRKCSH-217ENST00000592741 FMR1NBQ8N0W7 255 aaPredicted RBP19.27■□□□□ 0.67
PRKCSH-217ENST00000592741 LCORLQ8N3X6 602 aa19.27■□□□□ 0.67
PRKCSH-217ENST00000592741 SENP2Q9HC62 589 aa19.27■□□□□ 0.67
PRKCSH-217ENST00000592741 ANO10Q9NW15 660 aa19.27■□□□□ 0.67
PRKCSH-217ENST00000592741 CCDC69A6NI79 296 aa19.26■□□□□ 0.67
PRKCSH-217ENST00000592741 CDC27P30260 824 aa19.26■□□□□ 0.67
PRKCSH-217ENST00000592741 SLC12A7Q9Y666 1083 aa19.26■□□□□ 0.67
PRKCSH-217ENST00000592741 KCNQ2O43526 872 aa19.25■□□□□ 0.67
PRKCSH-217ENST00000592741 IARSP41252 1262 aaKnown RBP19.25■□□□□ 0.67
PRKCSH-217ENST00000592741 IQCB1Q15051 598 aa19.25■□□□□ 0.67
PRKCSH-217ENST00000592741 C11orf57Q6ZUT1 292 aaPredicted RBP19.25■□□□□ 0.67
PRKCSH-217ENST00000592741 ANKRD18AQ8IVF6 992 aa19.25■□□□□ 0.67
PRKCSH-217ENST00000592741 STAG1Q8WVM7 1258 aa19.25■□□□□ 0.67
PRKCSH-217ENST00000592741 KCNF1Q9H3M0 494 aa19.25■□□□□ 0.67
PRKCSH-217ENST00000592741 INCENPQ9NQS7 918 aa19.25■□□□□ 0.67
PRKCSH-217ENST00000592741 GNL3LQ9NVN8 582 aaKnown RBP19.25■□□□□ 0.67
PRKCSH-217ENST00000592741 ZSWIM5Q9P217 1185 aa19.25■□□□□ 0.67
PRKCSH-217ENST00000592741 ECM29Q5VYK3 1845 aa19.25■□□□□ 0.67
PRKCSH-217ENST00000592741 A0A1B0GVL5 298 aa19.25■□□□□ 0.67
PRKCSH-217ENST00000592741 PRKAB2O43741 272 aa19.25■□□□□ 0.67
PRKCSH-217ENST00000592741 TRIM29Q14134 588 aa19.25■□□□□ 0.67
PRKCSH-217ENST00000592741 DNTTIP2Q5QJE6 756 aaKnown RBP19.25■□□□□ 0.67
PRKCSH-217ENST00000592741 KRT40Q6A162 431 aa19.25■□□□□ 0.67
PRKCSH-217ENST00000592741 DRC7Q8IY82 874 aa19.25■□□□□ 0.67
PRKCSH-217ENST00000592741 SPTLC3Q9NUV7 552 aa19.25■□□□□ 0.67
PRKCSH-217ENST00000592741 STK36Q9NRP7 1315 aa19.24■□□□□ 0.67
PRKCSH-217ENST00000592741 GNL2Q13823 731 aaKnown RBP19.24■□□□□ 0.67
PRKCSH-217ENST00000592741 SART3Q15020 963 aaKnown RBP19.24■□□□□ 0.67
PRKCSH-217ENST00000592741 ERFEQ4G0M1 354 aa19.24■□□□□ 0.67
PRKCSH-217ENST00000592741 CCDC144CPQ8IYA2 1237 aa19.24■□□□□ 0.67
PRKCSH-217ENST00000592741 PHKBQ93100 1093 aa19.24■□□□□ 0.67
PRKCSH-217ENST00000592741 AIFM3Q96NN9 605 aa19.24■□□□□ 0.67
PRKCSH-217ENST00000592741 SDF4Q9BRK5 362 aa19.24■□□□□ 0.67
PRKCSH-217ENST00000592741 NDUFA8P51970 172 aa19.24■□□□□ 0.67
PRKCSH-217ENST00000592741 NTRK3Q16288 839 aa19.24■□□□□ 0.67
PRKCSH-217ENST00000592741 VPS37DQ86XT2 251 aa19.24■□□□□ 0.67
PRKCSH-217ENST00000592741 LINC00116Q8NCU8 138 aa19.24■□□□□ 0.67
PRKCSH-217ENST00000592741 RNF41Q9H4P4 317 aaPredicted RBP19.24■□□□□ 0.67
PRKCSH-217ENST00000592741 A0A1B0GUL6 1792 aa19.23■□□□□ 0.67
PRKCSH-217ENST00000592741 NID2Q14112 1375 aa19.23■□□□□ 0.67
PRKCSH-217ENST00000592741 ZNF804BA4D1E1 1349 aa19.23■□□□□ 0.67
PRKCSH-217ENST00000592741 CYP7A1P22680 504 aa19.23■□□□□ 0.67
PRKCSH-217ENST00000592741 UBE4AQ14139 1066 aa19.23■□□□□ 0.67
PRKCSH-217ENST00000592741 SF3B3Q15393 1217 aaKnown RBP19.23■□□□□ 0.67
PRKCSH-217ENST00000592741 CEP57L1Q8IYX8 460 aa19.23■□□□□ 0.67
PRKCSH-217ENST00000592741 MIGA1Q8NAN2 632 aa19.23■□□□□ 0.67
PRKCSH-217ENST00000592741 MYL10Q9BUA6 226 aa19.23■□□□□ 0.67
PRKCSH-217ENST00000592741 TOMM22Q9NS69 142 aa19.23■□□□□ 0.67
PRKCSH-217ENST00000592741 TACC3Q9Y6A5 838 aa19.23■□□□□ 0.67
PRKCSH-217ENST00000592741 COL4A1P02462 1669 aa19.23■□□□□ 0.67
PRKCSH-217ENST00000592741 BECN2A8MW95 431 aa19.22■□□□□ 0.67
PRKCSH-217ENST00000592741 PTGS1P23219 599 aa19.22■□□□□ 0.67
PRKCSH-217ENST00000592741 SSRP1Q08945 709 aaKnown RBP19.22■□□□□ 0.67
PRKCSH-217ENST00000592741 RRP12Q5JTH9 1297 aaKnown RBP19.22■□□□□ 0.67
PRKCSH-217ENST00000592741 SARM1Q6SZW1 724 aa19.22■□□□□ 0.67
PRKCSH-217ENST00000592741 MTA3Q9BTC8 594 aa19.22■□□□□ 0.67
PRKCSH-217ENST00000592741 NAT10Q9H0A0 1025 aaKnown RBP19.22■□□□□ 0.67
PRKCSH-217ENST00000592741 FAM217BQ9NTX9 383 aaPredicted RBP19.22■□□□□ 0.67
PRKCSH-217ENST00000592741 UQCRHLA0A096LP55 91 aa19.22■□□□□ 0.67
PRKCSH-217ENST00000592741 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.22■□□□□ 0.67
PRKCSH-217ENST00000592741 RANBP6O60518 1105 aaKnown RBP19.22■□□□□ 0.67
PRKCSH-217ENST00000592741 UQCRHP07919 91 aa19.22■□□□□ 0.67
PRKCSH-217ENST00000592741 CDC25BP30305 580 aa19.22■□□□□ 0.67
PRKCSH-217ENST00000592741 SLC39A14Q15043 492 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms