RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 ZBED3Q96IU2 234 aaPredicted RBP27.19■■□□□ 1.94
R3HDM4-205ENST00000589445 TDRD3Q9H7E2 651 aaKnown RBP27.19■■□□□ 1.94
R3HDM4-205ENST00000589445 PCNTO95613 3336 aa27.19■■□□□ 1.94
R3HDM4-205ENST00000589445 FOCADQ5VW36 1801 aa27.18■■□□□ 1.94
R3HDM4-205ENST00000589445 TRIM6-TRIM34B2RNG4 842 aa27.18■■□□□ 1.94
R3HDM4-205ENST00000589445 LDHCP07864 332 aa27.18■■□□□ 1.94
R3HDM4-205ENST00000589445 PDE6AP16499 860 aa27.18■■□□□ 1.94
R3HDM4-205ENST00000589445 SLC9C2Q5TAH2 1124 aa27.18■■□□□ 1.94
R3HDM4-205ENST00000589445 TMOD2Q9NZR1 351 aa27.18■■□□□ 1.94
R3HDM4-205ENST00000589445 SCAF8Q9UPN6 1271 aaKnown RBP27.18■■□□□ 1.94
R3HDM4-205ENST00000589445 HSPA1AP0DMV8 641 aaKnown RBP27.17■■□□□ 1.94
R3HDM4-205ENST00000589445 HSPA1BP0DMV9 641 aaKnown RBP27.17■■□□□ 1.94
R3HDM4-205ENST00000589445 KBTBD3Q8NAB2 608 aa27.17■■□□□ 1.94
R3HDM4-205ENST00000589445 ZC3H15Q8WU90 426 aaKnown RBP27.17■■□□□ 1.94
R3HDM4-205ENST00000589445 OSBPL3Q9H4L5 887 aa27.17■■□□□ 1.94
R3HDM4-205ENST00000589445 NAV1Q8NEY1 1877 aa27.17■■□□□ 1.94
R3HDM4-205ENST00000589445 RGS3P49796 1198 aa27.16■■□□□ 1.94
R3HDM4-205ENST00000589445 ADGRA1Q86SQ6 560 aa27.16■■□□□ 1.94
R3HDM4-205ENST00000589445 APOBEC3FQ8IUX4 373 aaKnown RBP27.16■■□□□ 1.94
R3HDM4-205ENST00000589445 TRPM7Q96QT4 1865 aa27.16■■□□□ 1.94
R3HDM4-205ENST00000589445 ZNF532Q9HCE3 1301 aa27.16■■□□□ 1.94
R3HDM4-205ENST00000589445 ADM5C9JUS6 153 aa27.15■■□□□ 1.94
R3HDM4-205ENST00000589445 CACNB3P54284 484 aa27.15■■□□□ 1.94
R3HDM4-205ENST00000589445 SPDYE2Q495Y8 402 aa27.15■■□□□ 1.94
R3HDM4-205ENST00000589445 ZSCAN25Q6NSZ9 544 aa27.15■■□□□ 1.94
R3HDM4-205ENST00000589445 APOBEC3HQ6NTF7 200 aaKnown RBP27.15■■□□□ 1.94
R3HDM4-205ENST00000589445 SULF1Q8IWU6 871 aa27.15■■□□□ 1.94
R3HDM4-205ENST00000589445 MIGA1Q8NAN2 632 aa27.15■■□□□ 1.94
R3HDM4-205ENST00000589445 RILPL2Q969X0 211 aa27.15■■□□□ 1.94
R3HDM4-205ENST00000589445 MRIQ9BWK5 157 aa27.15■■□□□ 1.94
R3HDM4-205ENST00000589445 GLIS2Q9BZE0 524 aaPredicted RBP27.15■■□□□ 1.94
R3HDM4-205ENST00000589445 AATFQ9NY61 560 aaKnown RBP eCLIP27.15■■□□□ 1.94
R3HDM4-205ENST00000589445 ZNF70Q9UC06 446 aaPredicted RBP27.15■■□□□ 1.94
R3HDM4-205ENST00000589445 PITPNM2Q9BZ72 1349 aa27.15■■□□□ 1.94
R3HDM4-205ENST00000589445 TTC22Q5TAA0 569 aa27.14■■□□□ 1.94
R3HDM4-205ENST00000589445 KRT26Q7Z3Y9 468 aa27.14■■□□□ 1.94
R3HDM4-205ENST00000589445 CNTROBQ8N137 903 aa27.14■■□□□ 1.94
R3HDM4-205ENST00000589445 EVI5LQ96CN4 794 aa27.14■■□□□ 1.94
R3HDM4-205ENST00000589445 IGSF3O75054 1194 aa27.13■■□□□ 1.93
R3HDM4-205ENST00000589445 ADD2P35612 726 aa27.13■■□□□ 1.93
R3HDM4-205ENST00000589445 SLFNL1Q499Z3 407 aa27.13■■□□□ 1.93
R3HDM4-205ENST00000589445 CDC42EP5Q6NZY7 148 aa27.13■■□□□ 1.93
R3HDM4-205ENST00000589445 USP40Q9NVE5 1235 aa27.13■■□□□ 1.93
R3HDM4-205ENST00000589445 TCP10L2B9ZVM9 353 aa27.12■■□□□ 1.93
R3HDM4-205ENST00000589445 CHGBP05060 677 aa27.12■■□□□ 1.93
R3HDM4-205ENST00000589445 LRRFIP1Q32MZ4 808 aaKnown RBP27.12■■□□□ 1.93
R3HDM4-205ENST00000589445 FAM163AQ96GL9 167 aaPredicted RBP27.12■■□□□ 1.93
R3HDM4-205ENST00000589445 GPR75-ASB3A0A0A6YYF3 556 aa27.11■■□□□ 1.93
R3HDM4-205ENST00000589445 BAG3O95817 575 aa27.11■■□□□ 1.93
R3HDM4-205ENST00000589445 USP48Q86UV5 1035 aa27.11■■□□□ 1.93
R3HDM4-205ENST00000589445 PGAP2Q9UHJ9 254 aa27.11■■□□□ 1.93
R3HDM4-205ENST00000589445 TCRBV5S4A2TA0A5A2 114 aa27.1■■□□□ 1.93
R3HDM4-205ENST00000589445 TRAF5O00463 557 aa27.1■■□□□ 1.93
R3HDM4-205ENST00000589445 GSPT1P15170 499 aaKnown RBP27.1■■□□□ 1.93
R3HDM4-205ENST00000589445 TMED8Q6PL24 325 aaPredicted RBP27.1■■□□□ 1.93
R3HDM4-205ENST00000589445 CDC37L1Q7L3B6 337 aa27.1■■□□□ 1.93
R3HDM4-205ENST00000589445 SH3RF3Q8TEJ3 882 aaPredicted RBP27.1■■□□□ 1.93
R3HDM4-205ENST00000589445 MAGEB6P1A0A0J9YX57 407 aa27.09■■□□□ 1.93
R3HDM4-205ENST00000589445 DYNLL1P63167 89 aaKnown RBP27.09■■□□□ 1.93
R3HDM4-205ENST00000589445 TNFAIP1Q13829 316 aa27.09■■□□□ 1.93
R3HDM4-205ENST00000589445 TEX11Q8IYF3 940 aa27.09■■□□□ 1.93
R3HDM4-205ENST00000589445 RFX7Q2KHR2 1363 aa27.09■■□□□ 1.93
R3HDM4-205ENST00000589445 RNF113AO15541 343 aaKnown RBP27.08■■□□□ 1.93
R3HDM4-205ENST00000589445 ZFYP08048 801 aaPredicted RBP27.08■■□□□ 1.93
R3HDM4-205ENST00000589445 TNNI2P48788 182 aa27.08■■□□□ 1.93
R3HDM4-205ENST00000589445 PICALMQ13492 652 aa27.08■■□□□ 1.93
R3HDM4-205ENST00000589445 UBE3CQ15386 1083 aa27.08■■□□□ 1.93
R3HDM4-205ENST00000589445 ZNF408Q9H9D4 720 aa27.08■■□□□ 1.93
R3HDM4-205ENST00000589445 MYH1P12882 1939 aa27.08■■□□□ 1.93
R3HDM4-205ENST00000589445 DDX60LQ5H9U9 1706 aaKnown RBP27.07■■□□□ 1.92
R3HDM4-205ENST00000589445 PLCG2P16885 1265 aa27.07■■□□□ 1.92
R3HDM4-205ENST00000589445 DLK2Q6UY11 383 aa27.07■■□□□ 1.92
R3HDM4-205ENST00000589445 MBD4O95243 580 aa27.06■■□□□ 1.92
R3HDM4-205ENST00000589445 RHBDL3P58872 404 aa27.06■■□□□ 1.92
R3HDM4-205ENST00000589445 TCP10Q12799 353 aa27.06■■□□□ 1.92
R3HDM4-205ENST00000589445 NFIAQ12857 509 aa27.06■■□□□ 1.92
R3HDM4-205ENST00000589445 APPBP2Q92624 585 aa27.06■■□□□ 1.92
R3HDM4-205ENST00000589445 CDCA5Q96FF9 252 aa27.06■■□□□ 1.92
R3HDM4-205ENST00000589445 DEFB129Q9H1M3 183 aa27.06■■□□□ 1.92
R3HDM4-205ENST00000589445 FMR1Q06787 632 aaKnown RBP eCLIP27.05■■□□□ 1.92
R3HDM4-205ENST00000589445 RASA3Q14644 834 aa27.05■■□□□ 1.92
R3HDM4-205ENST00000589445 LCORLQ8N3X6 602 aa27.05■■□□□ 1.92
R3HDM4-205ENST00000589445 AIDAQ96BJ3 306 aa27.05■■□□□ 1.92
R3HDM4-205ENST00000589445 ARMT1Q9H993 441 aa27.05■■□□□ 1.92
R3HDM4-205ENST00000589445 GTF3C3Q9Y5Q9 886 aa27.05■■□□□ 1.92
R3HDM4-205ENST00000589445 CNTNAP1P78357 1384 aa27.05■■□□□ 1.92
R3HDM4-205ENST00000589445 BAZ2AQ9UIF9 1905 aaKnown RBP27.04■■□□□ 1.92
R3HDM4-205ENST00000589445 SDSP20132 328 aa27.04■■□□□ 1.92
R3HDM4-205ENST00000589445 PRAMEF18Q5VWM3 479 aa27.04■■□□□ 1.92
R3HDM4-205ENST00000589445 CERS3Q8IU89 383 aa27.04■■□□□ 1.92
R3HDM4-205ENST00000589445 WDHD1O75717 1129 aaPredicted RBP27.03■■□□□ 1.92
R3HDM4-205ENST00000589445 PPP4CP60510 307 aa27.03■■□□□ 1.92
R3HDM4-205ENST00000589445 RIOK1Q9BRS2 568 aaKnown RBP27.03■■□□□ 1.92
R3HDM4-205ENST00000589445 TMEM39BQ9GZU3 492 aa27.03■■□□□ 1.92
R3HDM4-205ENST00000589445 DIAPH3Q9NSV4 1193 aa27.03■■□□□ 1.92
R3HDM4-205ENST00000589445 PPP2R3BQ9Y5P8 575 aa27.03■■□□□ 1.92
R3HDM4-205ENST00000589445 LAMB1P07942 1786 aa27.02■■□□□ 1.92
R3HDM4-205ENST00000589445 ITGBL1O95965 494 aaPredicted RBP27.02■■□□□ 1.92
R3HDM4-205ENST00000589445 USP5P45974 858 aa27.02■■□□□ 1.92
R3HDM4-205ENST00000589445 FKBP1CQ5VVH2 108 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms