RNA–Protein interactions for RNA: ENST00000588720.1

BCAS3-220, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

Gene BCAS3, Length 4,556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-220ENST00000588720 RABL6Q3YEC7 729 aaPredicted RBP13.17□□□□□ -0.3
BCAS3-220ENST00000588720 CFAP100Q494V2 611 aa13.17□□□□□ -0.3
BCAS3-220ENST00000588720 CCDC148Q8NFR7 591 aa13.17□□□□□ -0.3
BCAS3-220ENST00000588720 FAM200AQ8TCP9 573 aa13.17□□□□□ -0.3
BCAS3-220ENST00000588720 PYM1Q9BRP8 204 aaKnown RBP13.17□□□□□ -0.3
BCAS3-220ENST00000588720 PPFIBP1Q86W92 1011 aa13.17□□□□□ -0.3
BCAS3-220ENST00000588720 ZKSCAN5Q9Y2L8 839 aa13.17□□□□□ -0.3
BCAS3-220ENST00000588720 ADCY5O95622 1261 aa13.17□□□□□ -0.3
BCAS3-220ENST00000588720 AKNAD1Q5T1N1 836 aa13.17□□□□□ -0.3
BCAS3-220ENST00000588720 TTLL5Q6EMB2 1281 aa13.17□□□□□ -0.3
BCAS3-220ENST00000588720 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.17□□□□□ -0.3
BCAS3-220ENST00000588720 GBP3Q9H0R5 595 aa13.17□□□□□ -0.3
BCAS3-220ENST00000588720 VAT1LQ9HCJ6 419 aa13.17□□□□□ -0.3
BCAS3-220ENST00000588720 CYP21A2P08686 494 aa13.17□□□□□ -0.3
BCAS3-220ENST00000588720 EPS15P42566 896 aa13.17□□□□□ -0.3
BCAS3-220ENST00000588720 GYG1P46976 350 aa13.17□□□□□ -0.3
BCAS3-220ENST00000588720 RBM28Q9NW13 759 aaKnown RBP13.17□□□□□ -0.3
BCAS3-220ENST00000588720 CDHR2Q9BYE9 1310 aa13.16□□□□□ -0.3
BCAS3-220ENST00000588720 RIMBP2O15034 1052 aa13.16□□□□□ -0.3
BCAS3-220ENST00000588720 JAK2O60674 1132 aa13.16□□□□□ -0.3
BCAS3-220ENST00000588720 NKX1-1Q15270 411 aaPredicted RBP13.16□□□□□ -0.3
BCAS3-220ENST00000588720 SUSD4Q5VX71 490 aa13.16□□□□□ -0.3
BCAS3-220ENST00000588720 CABP5Q9NP86 173 aa13.16□□□□□ -0.3
BCAS3-220ENST00000588720 SEC31BQ9NQW1 1179 aa13.16□□□□□ -0.3
BCAS3-220ENST00000588720 BIN1O00499 593 aa13.16□□□□□ -0.3
BCAS3-220ENST00000588720 NECTIN1Q15223 517 aa13.16□□□□□ -0.3
BCAS3-220ENST00000588720 QTRT2Q9H974 415 aaKnown RBP13.16□□□□□ -0.3
BCAS3-220ENST00000588720 MAST3O60307 1309 aa13.16□□□□□ -0.3
BCAS3-220ENST00000588720 CALML3P27482 149 aa13.16□□□□□ -0.3
BCAS3-220ENST00000588720 MARCKSP29966 332 aaPredicted RBP13.16□□□□□ -0.3
BCAS3-220ENST00000588720 SSR1P43307 286 aaKnown RBP13.16□□□□□ -0.3
BCAS3-220ENST00000588720 PICALMQ13492 652 aa13.16□□□□□ -0.3
BCAS3-220ENST00000588720 PKP1Q13835 747 aa13.16□□□□□ -0.3
BCAS3-220ENST00000588720 PDIA6Q15084 440 aa13.16□□□□□ -0.3
BCAS3-220ENST00000588720 PPP2R5BQ15173 497 aa13.16□□□□□ -0.3
BCAS3-220ENST00000588720 ZNF76P36508 570 aa13.15□□□□□ -0.3
BCAS3-220ENST00000588720 IFNL3Q8IZI9 196 aa13.15□□□□□ -0.3
BCAS3-220ENST00000588720 AATFQ9NY61 560 aaKnown RBP eCLIP13.15□□□□□ -0.3
BCAS3-220ENST00000588720 TRIM75PA6NK02 468 aa13.15□□□□□ -0.3
BCAS3-220ENST00000588720 SSBP05455 408 aaKnown RBP eCLIP13.15□□□□□ -0.3
BCAS3-220ENST00000588720 CTDSPL2Q05D32 466 aa13.15□□□□□ -0.3
BCAS3-220ENST00000588720 TMEM266Q2M3C6 531 aa13.15□□□□□ -0.3
BCAS3-220ENST00000588720 FAM173BQ6P4H8 233 aa13.15□□□□□ -0.3
BCAS3-220ENST00000588720 CDC37L1Q7L3B6 337 aa13.15□□□□□ -0.3
BCAS3-220ENST00000588720 TEX11Q8IYF3 940 aa13.15□□□□□ -0.3
BCAS3-220ENST00000588720 TCP11L1Q9NUJ3 509 aa13.15□□□□□ -0.3
BCAS3-220ENST00000588720 CLGNO14967 610 aa13.15□□□□□ -0.3
BCAS3-220ENST00000588720 PFKFB2O60825 505 aa13.15□□□□□ -0.3
BCAS3-220ENST00000588720 TTC6Q86TZ1 520 aa13.15□□□□□ -0.3
BCAS3-220ENST00000588720 CAGE1Q8TC20 777 aa13.15□□□□□ -0.31
BCAS3-220ENST00000588720 DEXIO95424 95 aa13.14□□□□□ -0.31
BCAS3-220ENST00000588720 UBA7P41226 1012 aa13.14□□□□□ -0.31
BCAS3-220ENST00000588720 FAM196AQ6ZSG2 479 aa13.14□□□□□ -0.31
BCAS3-220ENST00000588720 CLIP2Q9UDT6 1046 aa13.14□□□□□ -0.31
BCAS3-220ENST00000588720 SHPRHQ149N8 1683 aa13.14□□□□□ -0.31
BCAS3-220ENST00000588720 ZNF445P59923 1031 aa13.14□□□□□ -0.31
BCAS3-220ENST00000588720 FOXO4P98177 505 aa13.14□□□□□ -0.31
BCAS3-220ENST00000588720 ANO6Q4KMQ2 910 aa13.14□□□□□ -0.31
BCAS3-220ENST00000588720 KCNQ4P56696 695 aa13.14□□□□□ -0.31
BCAS3-220ENST00000588720 ZHX3Q9H4I2 956 aa13.14□□□□□ -0.31
BCAS3-220ENST00000588720 PRDM1O75626 825 aa13.13□□□□□ -0.31
BCAS3-220ENST00000588720 SFPQP23246 707 aaKnown RBP eCLIP13.13□□□□□ -0.31
BCAS3-220ENST00000588720 TYRO3Q06418 890 aa13.13□□□□□ -0.31
BCAS3-220ENST00000588720 ERFEQ4G0M1 354 aa13.13□□□□□ -0.31
BCAS3-220ENST00000588720 KLHL10Q6JEL2 608 aa13.13□□□□□ -0.31
BCAS3-220ENST00000588720 TBC1D22AQ8WUA7 517 aa13.13□□□□□ -0.31
BCAS3-220ENST00000588720 MTMR6Q9Y217 621 aa13.13□□□□□ -0.31
BCAS3-220ENST00000588720 USP42Q9H9J4 1324 aaKnown RBP13.13□□□□□ -0.31
BCAS3-220ENST00000588720 ADD2P35612 726 aa13.13□□□□□ -0.31
BCAS3-220ENST00000588720 FAM182BQ5T319 152 aa13.13□□□□□ -0.31
BCAS3-220ENST00000588720 OGFOD1Q8N543 542 aa13.13□□□□□ -0.31
BCAS3-220ENST00000588720 UTYO14607 1347 aa13.13□□□□□ -0.31
BCAS3-220ENST00000588720 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.13□□□□□ -0.31
BCAS3-220ENST00000588720 SEMA3EO15041 775 aa13.13□□□□□ -0.31
BCAS3-220ENST00000588720 DTNBO60941 627 aa13.13□□□□□ -0.31
BCAS3-220ENST00000588720 APBA3O96018 575 aa13.13□□□□□ -0.31
BCAS3-220ENST00000588720 KRT2P35908 639 aa13.13□□□□□ -0.31
BCAS3-220ENST00000588720 PPARAQ07869 468 aa13.13□□□□□ -0.31
BCAS3-220ENST00000588720 LEO1Q8WVC0 666 aaPredicted RBP13.13□□□□□ -0.31
BCAS3-220ENST00000588720 ZNHIT6Q9NWK9 470 aaKnown RBP13.13□□□□□ -0.31
BCAS3-220ENST00000588720 HEATR3Q7Z4Q2 680 aa13.13□□□□□ -0.31
BCAS3-220ENST00000588720 FLAD1Q8NFF5 587 aa13.13□□□□□ -0.31
BCAS3-220ENST00000588720 OSBP2Q969R2 916 aa13.13□□□□□ -0.31
BCAS3-220ENST00000588720 HDAC9Q9UKV0 1011 aa13.13□□□□□ -0.31
BCAS3-220ENST00000588720 RPS6KA4O75676 772 aa13.12□□□□□ -0.31
BCAS3-220ENST00000588720 PI16Q6UXB8 463 aa13.12□□□□□ -0.31
BCAS3-220ENST00000588720 FEZ1Q99689 392 aa13.12□□□□□ -0.31
BCAS3-220ENST00000588720 RILPL1Q5EBL4 403 aa13.12□□□□□ -0.31
BCAS3-220ENST00000588720 STK32BQ9NY57 414 aa13.12□□□□□ -0.31
BCAS3-220ENST00000588720 MEGF6O75095 1541 aa13.12□□□□□ -0.31
BCAS3-220ENST00000588720 TXLNBQ8N3L3 684 aa13.12□□□□□ -0.31
BCAS3-220ENST00000588720 CUL5Q93034 780 aa13.12□□□□□ -0.31
BCAS3-220ENST00000588720 CEP89Q96ST8 783 aa13.12□□□□□ -0.31
BCAS3-220ENST00000588720 ZNF804BA4D1E1 1349 aa13.12□□□□□ -0.31
BCAS3-220ENST00000588720 ANKRD26Q9UPS8 1709 aa13.12□□□□□ -0.31
BCAS3-220ENST00000588720 NEMFO60524 1076 aa13.12□□□□□ -0.31
BCAS3-220ENST00000588720 FAM160A1Q05DH4 1040 aa13.12□□□□□ -0.31
BCAS3-220ENST00000588720 DPP8Q6V1X1 898 aaPredicted RBP13.12□□□□□ -0.31
BCAS3-220ENST00000588720 RFX7Q2KHR2 1363 aa13.11□□□□□ -0.31
BCAS3-220ENST00000588720 M0R2C6 588 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms