RNA–Protein interactions for RNA: ENST00000585685.5

APOC4-APOC2-201, Transcript of APOC4-APOC2 readthrough (NMD candidate), humanhuman

TSL 5

Gene APOC4-APOC2, Length 1,829 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-APOC2-201ENST00000585685 MYH13Q9UKX3 1938 aa19.23■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 ME1P48163 572 aa19.23■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 TERF1P54274 439 aa19.23■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 KIF23Q02241 960 aaPredicted RBP19.23■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 KIAA2012Q0VF49 1180 aa19.23■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 AKNAD1Q5T1N1 836 aa19.23■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 MYSM1Q5VVJ2 828 aa19.23■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 CPLX2Q6PUV4 134 aaKnown RBP19.23■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 LUZP1Q86V48 1076 aa19.23■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 TDRD7Q8NHU6 1098 aaKnown RBP19.23■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 NACAP1Q9BZK3 213 aa19.23■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 KRT23Q9C075 422 aa19.23■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 PCDHA7Q9UN72 937 aa19.23■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 ZBTB43O43298 467 aa19.22■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 TPM3P06753 285 aa19.22■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 PLCB2Q00722 1185 aa19.22■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 ERFEQ4G0M1 354 aa19.22■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 ANKRD18AQ8IVF6 992 aa19.22■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 LCORLQ8N3X6 602 aa19.22■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 KCNG4Q8TDN1 519 aa19.22■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 STAG1Q8WVM7 1258 aa19.22■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 BTAF1O14981 1849 aa19.22■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 UBE4AQ14139 1066 aa19.21■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 MRPS27Q92552 414 aaKnown RBP19.21■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 MTA3Q9BTC8 594 aa19.21■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 SENP2Q9HC62 589 aa19.21■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 BSDC1Q9NW68 430 aaPredicted RBP19.21■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 ZSWIM5Q9P217 1185 aa19.21■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 KINO60870 393 aaKnown RBP19.21■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 CDC27P30260 824 aa19.21■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 ZNF165P49910 485 aa19.21■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 CTDSPL2Q05D32 466 aa19.21■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 VPS72Q15906 364 aa19.21■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 NTRK3Q16288 839 aa19.21■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 FAM98CQ17RN3 349 aaKnown RBP19.21■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 TMEM67Q5HYA8 995 aa19.21■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 SLC10A5Q5PT55 438 aa19.21■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 FSIP1Q8NA03 581 aa19.21■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 LRP2BPQ9P2M1 347 aa19.21■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 TACC3Q9Y6A5 838 aa19.21■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 SLC4A4Q9Y6R1 1079 aa19.21■□□□□ 0.67
APOC4-APOC2-201ENST00000585685 STK36Q9NRP7 1315 aa19.2■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 KIF28PB7ZC32 967 aa19.2■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 POLR3DP05423 398 aaPredicted RBP19.2■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 STK38Q15208 465 aa19.2■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 MFSD6Q6ZSS7 791 aa19.2■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 FMR1NBQ8N0W7 255 aaPredicted RBP19.2■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 PIBF1Q8WXW3 757 aa19.2■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 ALG1Q9BT22 464 aa19.2■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 DNAJC25Q9H1X3 360 aa19.2■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 CLIC4Q9Y696 253 aa19.2■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 GOLGA6L6A8MZA4 724 aa19.19■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 PRKAB2O43741 272 aa19.19■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 TDO2P48775 406 aa19.19■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 C3orf67Q6ZVT6 689 aa19.19■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 MICU3Q86XE3 530 aa19.19■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 INCENPQ9NQS7 918 aa19.19■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 GJB4Q9NTQ9 266 aa19.19■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 FAM217BQ9NTX9 383 aaPredicted RBP19.19■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 GNL3LQ9NVN8 582 aaKnown RBP19.19■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 NHSQ6T4R5 1651 aa19.19■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 COL1A1P02452 1464 aaPredicted RBP19.19■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 SPTLC2O15270 562 aa19.18■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 TPM2P07951 284 aa19.18■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 STX1AQ16623 288 aa19.18■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 SYNE3Q6ZMZ3 975 aa19.18■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 NFXL1Q6ZNB6 911 aa19.18■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 TTC12Q9H892 705 aaPredicted RBP19.18■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 SLC12A7Q9Y666 1083 aa19.18■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 GOLGA8AA7E2F4 631 aa19.18■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 IFIT3O14879 490 aaKnown RBP19.18■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 RXRAP19793 462 aa19.18■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 RC3H1Q5TC82 1133 aaKnown RBP19.18■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 ANO1Q5XXA6 986 aa19.18■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 ZNF830Q96NB3 372 aaPredicted RBP19.18■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 BCL2L12Q9HB09 334 aa19.18■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 MYH6P13533 1939 aa19.18■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 TAF1LQ8IZX4 1826 aa19.17■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 CCDC69A6NI79 296 aa19.17■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 IARSP41252 1262 aaKnown RBP19.17■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 IQCB1Q15051 598 aa19.17■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 SF3A1Q15459 793 aaKnown RBP19.17■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 KRT40Q6A162 431 aa19.17■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 PLA2G4DQ86XP0 818 aa19.17■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 RNF41Q9H4P4 317 aaPredicted RBP19.17■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 MINPP1Q9UNW1 487 aa19.17■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 BAZ2AQ9UIF9 1905 aaKnown RBP19.17■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 RANBP6O60518 1105 aaKnown RBP19.16■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 CYP7A1P22680 504 aa19.16■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 GYG1P46976 350 aa19.16■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 TBC1D9BQ66K14 1250 aa19.16■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.16■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 MPNDQ8N594 471 aa19.16■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 PHKBQ93100 1093 aa19.16■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 AIFM3Q96NN9 605 aa19.16■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 NARFQ9UHQ1 456 aa19.16■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 MYH2Q9UKX2 1941 aa19.16■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 THSD7AQ9UPZ6 1657 aa19.16■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 RCAN1P53805 252 aa19.16■□□□□ 0.66
APOC4-APOC2-201ENST00000585685 SART3Q15020 963 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 171.4 ms