RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 ZNF396Q96N95 335 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-232ENST00000584168 MYD88Q99836 296 aa13.66□□□□□ -0.22
CDK5RAP3-232ENST00000584168 NRBP1Q9UHY1 535 aa13.66□□□□□ -0.22
CDK5RAP3-232ENST00000584168 TPD52L2O43399 206 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-232ENST00000584168 UBXN4Q92575 508 aa13.65□□□□□ -0.22
CDK5RAP3-232ENST00000584168 TMX3Q96JJ7 454 aa13.65□□□□□ -0.22
CDK5RAP3-232ENST00000584168 KIF9Q9HAQ2 790 aa13.65□□□□□ -0.22
CDK5RAP3-232ENST00000584168 TBC1D2BQ9UPU7 963 aa13.65□□□□□ -0.22
CDK5RAP3-232ENST00000584168 TOGARAM1Q9Y4F4 1720 aa13.65□□□□□ -0.22
CDK5RAP3-232ENST00000584168 PNMA6EA0A0J9YXQ4 647 aa13.65□□□□□ -0.22
CDK5RAP3-232ENST00000584168 GOLGA6CA6NDK9 693 aa13.65□□□□□ -0.22
CDK5RAP3-232ENST00000584168 GOLGA6BA6NDN3 693 aa13.65□□□□□ -0.22
CDK5RAP3-232ENST00000584168 ONECUT3O60422 494 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-232ENST00000584168 GOLGA6DP0CG33 693 aa13.65□□□□□ -0.22
CDK5RAP3-232ENST00000584168 DDR1Q08345 913 aa13.65□□□□□ -0.22
CDK5RAP3-232ENST00000584168 PREPLQ4J6C6 727 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-232ENST00000584168 BEND3Q5T5X7 828 aa13.65□□□□□ -0.22
CDK5RAP3-232ENST00000584168 CACTINQ8WUQ7 758 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-232ENST00000584168 SRCIN1Q9C0H9 1055 aa13.65□□□□□ -0.22
CDK5RAP3-232ENST00000584168 GOLGA6AQ9NYA3 693 aa13.65□□□□□ -0.22
CDK5RAP3-232ENST00000584168 C5P01031 1676 aa13.65□□□□□ -0.23
CDK5RAP3-232ENST00000584168 A0A1B0GUA9 196 aa13.64□□□□□ -0.23
CDK5RAP3-232ENST00000584168 PPFIA4O75335 1185 aa13.64□□□□□ -0.23
CDK5RAP3-232ENST00000584168 FOXD4L6Q3SYB3 417 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP3-232ENST00000584168 MFSD4BQ5TF39 518 aa13.64□□□□□ -0.23
CDK5RAP3-232ENST00000584168 FOXD4L3Q6VB84 417 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP3-232ENST00000584168 NCAPG2Q86XI2 1143 aa13.64□□□□□ -0.23
CDK5RAP3-232ENST00000584168 FUCA2Q9BTY2 467 aa13.64□□□□□ -0.23
CDK5RAP3-232ENST00000584168 H3BQF6 201 aa13.64□□□□□ -0.23
CDK5RAP3-232ENST00000584168 HOXB7P09629 217 aa13.64□□□□□ -0.23
CDK5RAP3-232ENST00000584168 PRPHP41219 470 aa13.64□□□□□ -0.23
CDK5RAP3-232ENST00000584168 CCT4P50991 539 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP3-232ENST00000584168 CC2D1AQ6P1N0 951 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP3-232ENST00000584168 HYPKQ9NX55 129 aa13.64□□□□□ -0.23
CDK5RAP3-232ENST00000584168 VPS18Q9P253 973 aa13.64□□□□□ -0.23
CDK5RAP3-232ENST00000584168 BLOC1S6Q9UL45 172 aa13.64□□□□□ -0.23
CDK5RAP3-232ENST00000584168 CDKL5O76039 1030 aa13.63□□□□□ -0.23
CDK5RAP3-232ENST00000584168 NAP1L1P55209 391 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-232ENST00000584168 KSR2Q6VAB6 950 aa13.63□□□□□ -0.23
CDK5RAP3-232ENST00000584168 LRP10Q7Z4F1 713 aa13.63□□□□□ -0.23
CDK5RAP3-232ENST00000584168 SEPT12Q8IYM1 358 aa13.63□□□□□ -0.23
CDK5RAP3-232ENST00000584168 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.63□□□□□ -0.231e-7■■□□□ 13.3
CDK5RAP3-232ENST00000584168 ERC2O15083 957 aa13.63□□□□□ -0.23
CDK5RAP3-232ENST00000584168 OATP04181 439 aa13.63□□□□□ -0.23
CDK5RAP3-232ENST00000584168 PYGLP06737 847 aa13.63□□□□□ -0.23
CDK5RAP3-232ENST00000584168 HHATQ5VTY9 493 aa13.63□□□□□ -0.23
CDK5RAP3-232ENST00000584168 ANKRD13DQ6ZTN6 518 aa13.63□□□□□ -0.23
CDK5RAP3-232ENST00000584168 ZKSCAN4Q969J2 545 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-232ENST00000584168 LMCD1Q9NZU5 365 aa13.63□□□□□ -0.23
CDK5RAP3-232ENST00000584168 IGKV5-2P06315 115 aa13.62□□□□□ -0.23
CDK5RAP3-232ENST00000584168 CCDC93Q567U6 631 aa13.62□□□□□ -0.23
CDK5RAP3-232ENST00000584168 ZBTB10Q96DT7 871 aa13.62□□□□□ -0.23
CDK5RAP3-232ENST00000584168 CABS1Q96KC9 395 aa13.62□□□□□ -0.23
CDK5RAP3-232ENST00000584168 CHUKO15111 745 aa13.62□□□□□ -0.23
CDK5RAP3-232ENST00000584168 BRD1O95696 1058 aa13.62□□□□□ -0.23
CDK5RAP3-232ENST00000584168 IMPDH2P12268 514 aa13.62□□□□□ -0.23
CDK5RAP3-232ENST00000584168 PAX3P23760 479 aa13.62□□□□□ -0.23
CDK5RAP3-232ENST00000584168 USP48Q86UV5 1035 aa13.62□□□□□ -0.23
CDK5RAP3-232ENST00000584168 C3orf20Q8ND61 904 aa13.62□□□□□ -0.23
CDK5RAP3-232ENST00000584168 MMTAG2Q9BU76 263 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-232ENST00000584168 C9orf78Q9NZ63 289 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-232ENST00000584168 BIN2Q9UBW5 565 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-232ENST00000584168 ZBTB1Q9Y2K1 713 aa13.62□□□□□ -0.23
CDK5RAP3-232ENST00000584168 UBTFL1P0CB47 393 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-232ENST00000584168 RAB27AP51159 221 aa13.61□□□□□ -0.23
CDK5RAP3-232ENST00000584168 CLNS1AP54105 237 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-232ENST00000584168 IQCA1Q86XH1 822 aa13.61□□□□□ -0.23
CDK5RAP3-232ENST00000584168 GDPD2Q9HCC8 539 aa13.61□□□□□ -0.23
CDK5RAP3-232ENST00000584168 DOT1LQ8TEK3 1739 aa13.61□□□□□ -0.23
CDK5RAP3-232ENST00000584168 GOLGB1Q14789 3259 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-232ENST00000584168 BCL9O00512 1426 aa13.61□□□□□ -0.23
CDK5RAP3-232ENST00000584168 ITPK1Q13572 414 aa13.61□□□□□ -0.23
CDK5RAP3-232ENST00000584168 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-232ENST00000584168 MYLK4Q86YV6 388 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-232ENST00000584168 MRFAP1L1Q96HT8 127 aa13.61□□□□□ -0.23
CDK5RAP3-232ENST00000584168 IRX2Q9BZI1 471 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-232ENST00000584168 RANBP17Q9H2T7 1088 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-232ENST00000584168 PAPPAQ13219 1627 aa13.61□□□□□ -0.23
CDK5RAP3-232ENST00000584168 HMMRO75330 724 aa13.6□□□□□ -0.23
CDK5RAP3-232ENST00000584168 GNAI2P04899 355 aa13.6□□□□□ -0.23
CDK5RAP3-232ENST00000584168 NEK4P51957 841 aa13.6□□□□□ -0.23
CDK5RAP3-232ENST00000584168 CCDC158Q5M9N0 1113 aa13.6□□□□□ -0.23
CDK5RAP3-232ENST00000584168 PLEKHA4Q9H4M7 779 aa13.6□□□□□ -0.23
CDK5RAP3-232ENST00000584168 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.6□□□□□ -0.23
CDK5RAP3-232ENST00000584168 PDE1AP54750 535 aa13.6□□□□□ -0.23
CDK5RAP3-232ENST00000584168 TSHZ3Q63HK5 1081 aa13.6□□□□□ -0.23
CDK5RAP3-232ENST00000584168 SYNE4Q8N205 404 aa13.6□□□□□ -0.23
CDK5RAP3-232ENST00000584168 ATL2Q8NHH9 583 aa13.6□□□□□ -0.23
CDK5RAP3-232ENST00000584168 KLHDC4Q8TBB5 520 aa13.6□□□□□ -0.23
CDK5RAP3-232ENST00000584168 CCDC85AQ96PX6 553 aaPredicted RBP13.6□□□□□ -0.23
CDK5RAP3-232ENST00000584168 FUT8Q9BYC5 575 aa13.6□□□□□ -0.23
CDK5RAP3-232ENST00000584168 ARFGAP3Q9NP61 516 aa13.6□□□□□ -0.23
CDK5RAP3-232ENST00000584168 KCPQ6ZWJ8 1503 aa13.6□□□□□ -0.23
CDK5RAP3-232ENST00000584168 ITGB4P16144 1822 aa13.6□□□□□ -0.23
CDK5RAP3-232ENST00000584168 MYBPC2Q14324 1141 aa13.59□□□□□ -0.23
CDK5RAP3-232ENST00000584168 TRMT1Q9NXH9 659 aaKnown RBP13.59□□□□□ -0.23
CDK5RAP3-232ENST00000584168 AKAP2Q9Y2D5 859 aa13.59□□□□□ -0.23
CDK5RAP3-232ENST00000584168 TCHHQ07283 1943 aa13.59□□□□□ -0.23
CDK5RAP3-232ENST00000584168 GIMAP6Q6P9H5 292 aa13.59□□□□□ -0.23
CDK5RAP3-232ENST00000584168 RBM12BQ8IXT5 1001 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms