RNA–Protein interactions for RNA: ENST00000574855.1

NUP88-209, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-209ENST00000574855 SPG7Q9UQ90 795 aa5.75□□□□□ -1.49
NUP88-209ENST00000574855 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.74□□□□□ -1.49
NUP88-209ENST00000574855 COBLO75128 1261 aa5.74□□□□□ -1.49
NUP88-209ENST00000574855 P4HBP07237 508 aaKnown RBP5.74□□□□□ -1.49
NUP88-209ENST00000574855 GSTP1P09211 210 aaKnown RBP5.74□□□□□ -1.49
NUP88-209ENST00000574855 GRIK1P39086 918 aa5.74□□□□□ -1.49
NUP88-209ENST00000574855 ASPAP45381 313 aa5.74□□□□□ -1.49
NUP88-209ENST00000574855 FGD1P98174 961 aa5.74□□□□□ -1.49
NUP88-209ENST00000574855 INTS5Q6P9B9 1019 aaKnown RBP5.74□□□□□ -1.49
NUP88-209ENST00000574855 SHKBP1Q8TBC3 707 aa5.74□□□□□ -1.49
NUP88-209ENST00000574855 EZH1Q92800 747 aaPredicted RBP5.74□□□□□ -1.49
NUP88-209ENST00000574855 MFSD14AQ96MC6 490 aa5.74□□□□□ -1.49
NUP88-209ENST00000574855 WDR18Q9BV38 432 aa5.74□□□□□ -1.49
NUP88-209ENST00000574855 OSBPL7Q9BZF2 842 aa5.74□□□□□ -1.49
NUP88-209ENST00000574855 ZC3H12CQ9C0D7 883 aaKnown RBP5.74□□□□□ -1.49
NUP88-209ENST00000574855 CCDC86Q9H6F5 360 aaKnown RBP5.74□□□□□ -1.49
NUP88-209ENST00000574855 ATG3Q9NT62 314 aa5.74□□□□□ -1.49
NUP88-209ENST00000574855 PCMTD2Q9NV79 361 aa5.74□□□□□ -1.49
NUP88-209ENST00000574855 AP4E1Q9UPM8 1137 aa5.74□□□□□ -1.49
NUP88-209ENST00000574855 ACTL7BQ9Y614 415 aa5.74□□□□□ -1.49
NUP88-209ENST00000574855 WDR64B1ANS9 1081 aa5.73□□□□□ -1.49
NUP88-209ENST00000574855 TGFB1P01137 390 aa5.73□□□□□ -1.49
NUP88-209ENST00000574855 LDHBP07195 334 aaKnown RBP5.73□□□□□ -1.49
NUP88-209ENST00000574855 LIG1P18858 919 aa5.73□□□□□ -1.49
NUP88-209ENST00000574855 NME2P22392 152 aa5.73□□□□□ -1.49
NUP88-209ENST00000574855 ARNTP27540 789 aa5.73□□□□□ -1.49
NUP88-209ENST00000574855 SSTR4P31391 388 aa5.73□□□□□ -1.49
NUP88-209ENST00000574855 MAP7Q14244 749 aa5.73□□□□□ -1.49
NUP88-209ENST00000574855 C3orf58Q8NDZ4 430 aa5.73□□□□□ -1.49
NUP88-209ENST00000574855 FRMD6Q96NE9 622 aa5.73□□□□□ -1.49
NUP88-209ENST00000574855 SETDB2Q96T68 719 aa5.73□□□□□ -1.49
NUP88-209ENST00000574855 EMILIN2Q9BXX0 1053 aa5.73□□□□□ -1.49
NUP88-209ENST00000574855 CEP44Q9C0F1 390 aa5.73□□□□□ -1.49
NUP88-209ENST00000574855 KRT82Q9NSB4 513 aa5.73□□□□□ -1.49
NUP88-209ENST00000574855 PPM1HQ9ULR3 514 aa5.73□□□□□ -1.49
NUP88-209ENST00000574855 SAMM50Q9Y512 469 aa5.73□□□□□ -1.49
NUP88-209ENST00000574855 ANKRD33BA6NCL7 494 aa5.72□□□□□ -1.49
NUP88-209ENST00000574855 PRR19A6NJB7 356 aa5.72□□□□□ -1.49
NUP88-209ENST00000574855 NFICP08651 508 aa5.72□□□□□ -1.49
NUP88-209ENST00000574855 RAB6AP20340 208 aa5.72□□□□□ -1.49
NUP88-209ENST00000574855 CD97P48960 835 aa5.72□□□□□ -1.49
NUP88-209ENST00000574855 COL19A1Q14993 1142 aa5.72□□□□□ -1.49
NUP88-209ENST00000574855 SULF2Q8IWU5 870 aa5.72□□□□□ -1.49
NUP88-209ENST00000574855 FBXL6Q8N531 539 aa5.72□□□□□ -1.49
NUP88-209ENST00000574855 KCNB2Q92953 911 aa5.72□□□□□ -1.49
NUP88-209ENST00000574855 WDR89Q96FK6 387 aaPredicted RBP5.72□□□□□ -1.49
NUP88-209ENST00000574855 NECAB3Q96P71 396 aaPredicted RBP5.72□□□□□ -1.49
NUP88-209ENST00000574855 SEMA6CQ9H3T2 930 aa5.72□□□□□ -1.49
NUP88-209ENST00000574855 GSX1Q9H4S2 264 aaPredicted RBP5.72□□□□□ -1.49
NUP88-209ENST00000574855 FAM105AQ9NUU6 356 aa5.72□□□□□ -1.49
NUP88-209ENST00000574855 FAM8A1Q9UBU6 413 aa5.72□□□□□ -1.49
NUP88-209ENST00000574855 PPP1R9AQ9ULJ8 1098 aa5.72□□□□□ -1.49
NUP88-209ENST00000574855 ZNF862O60290 1169 aa5.71□□□□□ -1.5
NUP88-209ENST00000574855 ID3Q02535 119 aa5.71□□□□□ -1.5
NUP88-209ENST00000574855 KIF4BQ2VIQ3 1234 aa5.71□□□□□ -1.5
NUP88-209ENST00000574855 TPTE2Q6XPS3 522 aa5.71□□□□□ -1.5
NUP88-209ENST00000574855 PDZD3Q86UT5 571 aa5.71□□□□□ -1.5
NUP88-209ENST00000574855 TBC1D32Q96NH3 1257 aa5.71□□□□□ -1.5
NUP88-209ENST00000574855 OSBPL1AQ9BXW6 950 aa5.71□□□□□ -1.5
NUP88-209ENST00000574855 ACSS3Q9H6R3 686 aa5.71□□□□□ -1.5
NUP88-209ENST00000574855 C12orf49Q9H741 205 aa5.71□□□□□ -1.5
NUP88-209ENST00000574855 PRKAG2Q9UGJ0 569 aa5.71□□□□□ -1.5
NUP88-209ENST00000574855 LEMD3Q9Y2U8 911 aa5.71□□□□□ -1.5
NUP88-209ENST00000574855 TMPRSS2O15393 492 aa5.7□□□□□ -1.5
NUP88-209ENST00000574855 PRPF40AO75400 957 aaKnown RBP5.7□□□□□ -1.5
NUP88-209ENST00000574855 F13BP05160 661 aa5.7□□□□□ -1.5
NUP88-209ENST00000574855 CPSF6Q16630 551 aaKnown RBP eCLIP5.7□□□□□ -1.5
NUP88-209ENST00000574855 EAPPQ56P03 285 aaPredicted RBP5.7□□□□□ -1.5
NUP88-209ENST00000574855 MAP1SQ66K74 1059 aaPredicted RBP5.7□□□□□ -1.5
NUP88-209ENST00000574855 ANKRD24Q8TF21 1146 aa5.7□□□□□ -1.5
NUP88-209ENST00000574855 METTL22Q9BUU2 404 aaPredicted RBP5.7□□□□□ -1.5
NUP88-209ENST00000574855 ATXN3LQ9H3M9 355 aa5.7□□□□□ -1.5
NUP88-209ENST00000574855 PIDD1Q9HB75 910 aa5.7□□□□□ -1.5
NUP88-209ENST00000574855 CBX8Q9HC52 389 aa5.7□□□□□ -1.5
NUP88-209ENST00000574855 CRIM1Q9NZV1 1036 aa5.7□□□□□ -1.5
NUP88-209ENST00000574855 PIM2Q9P1W9 311 aa5.7□□□□□ -1.5
NUP88-209ENST00000574855 MED26O95402 600 aa5.69□□□□□ -1.5
NUP88-209ENST00000574855 USP17L7P0C7H9 530 aa5.69□□□□□ -1.5
NUP88-209ENST00000574855 EIF4BP23588 611 aaKnown RBP5.69□□□□□ -1.5
NUP88-209ENST00000574855 GNA15P30679 374 aa5.69□□□□□ -1.5
NUP88-209ENST00000574855 CYP27A1Q02318 531 aa5.69□□□□□ -1.5
NUP88-209ENST00000574855 LRRC14Q15048 493 aa5.69□□□□□ -1.5
NUP88-209ENST00000574855 DUSP27Q5VZP5 1158 aa5.69□□□□□ -1.5
NUP88-209ENST00000574855 ZAR1Q86SH2 424 aa5.69□□□□□ -1.5
NUP88-209ENST00000574855 STK35Q8TDR2 534 aa5.69□□□□□ -1.5
NUP88-209ENST00000574855 FANCD2OSQ96PS1 177 aa5.69□□□□□ -1.5
NUP88-209ENST00000574855 DAGLAQ9Y4D2 1042 aa5.69□□□□□ -1.5
NUP88-209ENST00000574855 KIAA1324LA8MWY0 1029 aaPredicted RBP5.68□□□□□ -1.5
NUP88-209ENST00000574855 ENC1O14682 589 aa5.68□□□□□ -1.5
NUP88-209ENST00000574855 FBXO24O75426 580 aa5.68□□□□□ -1.5
NUP88-209ENST00000574855 BMP6P22004 513 aa5.68□□□□□ -1.5
NUP88-209ENST00000574855 ADMP35318 185 aa5.68□□□□□ -1.5
NUP88-209ENST00000574855 ZNF252P-AS1Q0IIN9 211 aa5.68□□□□□ -1.5
NUP88-209ENST00000574855 ACSBG1Q96GR2 724 aa5.68□□□□□ -1.5
NUP88-209ENST00000574855 LGR6Q9HBX8 967 aa5.68□□□□□ -1.5
NUP88-209ENST00000574855 DISC1Q9NRI5 854 aa5.68□□□□□ -1.5
NUP88-209ENST00000574855 AK5Q9Y6K8 562 aa5.68□□□□□ -1.5
NUP88-209ENST00000574855 RNGTTO60942 597 aaKnown RBP5.67□□□□□ -1.5
NUP88-209ENST00000574855 FOSL1P15407 271 aa5.67□□□□□ -1.5
NUP88-209ENST00000574855 ZC3H12AQ5D1E8 599 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms