RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 CYP7A1P22680 504 aa26.73■■□□□ 1.87
RAB40B-207ENST00000572603 BTDP43251 543 aa26.73■■□□□ 1.87
RAB40B-207ENST00000572603 SLC9C2Q5TAH2 1124 aa26.73■■□□□ 1.87
RAB40B-207ENST00000572603 CHADLQ6NUI6 762 aa26.73■■□□□ 1.87
RAB40B-207ENST00000572603 RBM46Q8TBY0 533 aaKnown RBP26.73■■□□□ 1.87
RAB40B-207ENST00000572603 EVI5LQ96CN4 794 aa26.73■■□□□ 1.87
RAB40B-207ENST00000572603 MAP1SQ66K74 1059 aaPredicted RBP26.72■■□□□ 1.87
RAB40B-207ENST00000572603 CDC42EP5Q6NZY7 148 aa26.72■■□□□ 1.87
RAB40B-207ENST00000572603 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.72■■□□□ 1.87
RAB40B-207ENST00000572603 ZNF70Q9UC06 446 aaPredicted RBP26.72■■□□□ 1.87
RAB40B-207ENST00000572603 CLEC11AQ9Y240 323 aa26.72■■□□□ 1.87
RAB40B-207ENST00000572603 DDX60LQ5H9U9 1706 aaKnown RBP26.71■■□□□ 1.87
RAB40B-207ENST00000572603 TRPM7Q96QT4 1865 aa26.71■■□□□ 1.87
RAB40B-207ENST00000572603 RHBDL3P58872 404 aa26.71■■□□□ 1.87
RAB40B-207ENST00000572603 UBE3CQ15386 1083 aa26.71■■□□□ 1.87
RAB40B-207ENST00000572603 FSD1Q9BTV5 496 aa26.71■■□□□ 1.87
RAB40B-207ENST00000572603 MYO1BO43795 1136 aa26.69■■□□□ 1.86
RAB40B-207ENST00000572603 CACNB3P54284 484 aa26.69■■□□□ 1.86
RAB40B-207ENST00000572603 PPP4CP60510 307 aa26.69■■□□□ 1.86
RAB40B-207ENST00000572603 NAV1Q8NEY1 1877 aa26.69■■□□□ 1.86
RAB40B-207ENST00000572603 SCAF8Q9UPN6 1271 aaKnown RBP26.69■■□□□ 1.86
RAB40B-207ENST00000572603 TRIM6-TRIM34B2RNG4 842 aa26.68■■□□□ 1.86
RAB40B-207ENST00000572603 ADM5C9JUS6 153 aa26.68■■□□□ 1.86
RAB40B-207ENST00000572603 RGS3P49796 1198 aa26.68■■□□□ 1.86
RAB40B-207ENST00000572603 ZSCAN25Q6NSZ9 544 aa26.68■■□□□ 1.86
RAB40B-207ENST00000572603 APOBEC3FQ8IUX4 373 aaKnown RBP26.68■■□□□ 1.86
RAB40B-207ENST00000572603 CNTROBQ8N137 903 aa26.68■■□□□ 1.86
RAB40B-207ENST00000572603 MIGA1Q8NAN2 632 aa26.68■■□□□ 1.86
RAB40B-207ENST00000572603 SMC1BQ8NDV3 1235 aa26.68■■□□□ 1.86
RAB40B-207ENST00000572603 RIOK1Q9BRS2 568 aaKnown RBP26.68■■□□□ 1.86
RAB40B-207ENST00000572603 GLIS2Q9BZE0 524 aaPredicted RBP26.68■■□□□ 1.86
RAB40B-207ENST00000572603 AATFQ9NY61 560 aaKnown RBP eCLIP26.68■■□□□ 1.86
RAB40B-207ENST00000572603 CNTNAP1P78357 1384 aa26.68■■□□□ 1.86
RAB40B-207ENST00000572603 RNF113AO15541 343 aaKnown RBP26.67■■□□□ 1.86
RAB40B-207ENST00000572603 DYNLL1P63167 89 aaKnown RBP26.67■■□□□ 1.86
RAB40B-207ENST00000572603 DCPSQ96C86 337 aaKnown RBP26.67■■□□□ 1.86
RAB40B-207ENST00000572603 VEZTQ9HBM0 779 aa26.67■■□□□ 1.86
RAB40B-207ENST00000572603 USP40Q9NVE5 1235 aa26.67■■□□□ 1.86
RAB40B-207ENST00000572603 WDHD1O75717 1129 aaPredicted RBP26.66■■□□□ 1.86
RAB40B-207ENST00000572603 ITGBL1O95965 494 aaPredicted RBP26.66■■□□□ 1.86
RAB40B-207ENST00000572603 ZFYP08048 801 aaPredicted RBP26.66■■□□□ 1.86
RAB40B-207ENST00000572603 SDSP20132 328 aa26.66■■□□□ 1.86
RAB40B-207ENST00000572603 NFIAQ12857 509 aa26.66■■□□□ 1.86
RAB40B-207ENST00000572603 SH3RF3Q8TEJ3 882 aaPredicted RBP26.66■■□□□ 1.86
RAB40B-207ENST00000572603 RILPL2Q969X0 211 aa26.66■■□□□ 1.86
RAB40B-207ENST00000572603 FKBP1CQ5VVH2 108 aa26.65■■□□□ 1.86
RAB40B-207ENST00000572603 DLK2Q6UY11 383 aa26.65■■□□□ 1.86
RAB40B-207ENST00000572603 KRT26Q7Z3Y9 468 aa26.65■■□□□ 1.86
RAB40B-207ENST00000572603 APPBP2Q92624 585 aa26.65■■□□□ 1.86
RAB40B-207ENST00000572603 GTF3C3Q9Y5Q9 886 aa26.65■■□□□ 1.86
RAB40B-207ENST00000572603 SIPA1L1O43166 1804 aa26.65■■□□□ 1.86
RAB40B-207ENST00000572603 SSC5DA1L4H1 1573 aa26.64■■□□□ 1.86
RAB40B-207ENST00000572603 BAG3O95817 575 aa26.64■■□□□ 1.86
RAB40B-207ENST00000572603 CDC37L1Q7L3B6 337 aa26.64■■□□□ 1.86
RAB40B-207ENST00000572603 TICAM2Q86XR7 235 aa26.64■■□□□ 1.86
RAB40B-207ENST00000572603 OSBP2Q969R2 916 aa26.64■■□□□ 1.86
RAB40B-207ENST00000572603 IDI2Q9BXS1 227 aa26.64■■□□□ 1.86
RAB40B-207ENST00000572603 PUS7LQ9H0K6 701 aaKnown RBP26.64■■□□□ 1.86
RAB40B-207ENST00000572603 DDX4Q9NQI0 724 aaKnown RBP26.64■■□□□ 1.86
RAB40B-207ENST00000572603 FAM198AQ9UFP1 575 aa26.64■■□□□ 1.86
RAB40B-207ENST00000572603 MYH1P12882 1939 aa26.64■■□□□ 1.86
RAB40B-207ENST00000572603 PASKQ96RG2 1323 aa26.64■■□□□ 1.85
RAB40B-207ENST00000572603 TCP10L2B9ZVM9 353 aa26.63■■□□□ 1.85
RAB40B-207ENST00000572603 TRAF5O00463 557 aa26.63■■□□□ 1.85
RAB40B-207ENST00000572603 FMR1Q06787 632 aaKnown RBP eCLIP26.63■■□□□ 1.85
RAB40B-207ENST00000572603 FSTL1Q12841 308 aa26.63■■□□□ 1.85
RAB40B-207ENST00000572603 ZMYM1Q5SVZ6 1142 aa26.63■■□□□ 1.85
RAB40B-207ENST00000572603 USP48Q86UV5 1035 aa26.63■■□□□ 1.85
RAB40B-207ENST00000572603 SULF1Q8IWU6 871 aa26.63■■□□□ 1.85
RAB40B-207ENST00000572603 LCORLQ8N3X6 602 aa26.63■■□□□ 1.85
RAB40B-207ENST00000572603 NOL10Q9BSC4 688 aaKnown RBP26.63■■□□□ 1.85
RAB40B-207ENST00000572603 TMOD2Q9NZR1 351 aa26.63■■□□□ 1.85
RAB40B-207ENST00000572603 RPAP1Q9BWH6 1393 aaPredicted RBP26.62■■□□□ 1.85
RAB40B-207ENST00000572603 MAGEB6P1A0A0J9YX57 407 aa26.62■■□□□ 1.85
RAB40B-207ENST00000572603 LRRFIP1Q32MZ4 808 aaKnown RBP26.62■■□□□ 1.85
RAB40B-207ENST00000572603 TEX11Q8IYF3 940 aa26.62■■□□□ 1.85
RAB40B-207ENST00000572603 BAZ2AQ9UIF9 1905 aaKnown RBP26.61■■□□□ 1.85
RAB40B-207ENST00000572603 M0R2C6 588 aa26.61■■□□□ 1.85
RAB40B-207ENST00000572603 MBD4O95243 580 aa26.61■■□□□ 1.85
RAB40B-207ENST00000572603 PLCG2P16885 1265 aa26.61■■□□□ 1.85
RAB40B-207ENST00000572603 TNFAIP1Q13829 316 aa26.61■■□□□ 1.85
RAB40B-207ENST00000572603 RASA3Q14644 834 aa26.61■■□□□ 1.85
RAB40B-207ENST00000572603 BMP2KLQ5H9B9 411 aa26.61■■□□□ 1.85
RAB40B-207ENST00000572603 FAM83AQ86UY5 434 aa26.61■■□□□ 1.85
RAB40B-207ENST00000572603 CERS3Q8IU89 383 aa26.61■■□□□ 1.85
RAB40B-207ENST00000572603 DEFB129Q9H1M3 183 aa26.61■■□□□ 1.85
RAB40B-207ENST00000572603 ARMT1Q9H993 441 aa26.61■■□□□ 1.85
RAB40B-207ENST00000572603 COL2A1P02458 1487 aaPredicted RBP26.61■■□□□ 1.85
RAB40B-207ENST00000572603 PAPPA2Q9BXP8 1791 aa26.61■■□□□ 1.85
RAB40B-207ENST00000572603 CDAN1Q8IWY9 1227 aa26.6■■□□□ 1.85
RAB40B-207ENST00000572603 CDCA5Q96FF9 252 aa26.6■■□□□ 1.85
RAB40B-207ENST00000572603 TEPSINQ96N21 525 aa26.6■■□□□ 1.85
RAB40B-207ENST00000572603 SEC62Q99442 399 aaKnown RBP26.6■■□□□ 1.85
RAB40B-207ENST00000572603 PPP2R3BQ9Y5P8 575 aa26.6■■□□□ 1.85
RAB40B-207ENST00000572603 A0A0D9SFI3 127 aa26.59■■□□□ 1.85
RAB40B-207ENST00000572603 NPM3O75607 178 aaKnown RBP26.59■■□□□ 1.85
RAB40B-207ENST00000572603 FAM227BQ96M60 508 aa26.59■■□□□ 1.85
RAB40B-207ENST00000572603 TMEM39BQ9GZU3 492 aa26.59■■□□□ 1.85
RAB40B-207ENST00000572603 ENTPD3O75355 529 aa26.58■■□□□ 1.85
RAB40B-207ENST00000572603 NMIQ13287 307 aaPredicted RBP26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms