RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 R3HDM1Q15032 1099 aaKnown RBP12.15□□□□□ -0.47
GDE1-205ENST00000569899 KMT5BQ4FZB7 885 aa12.15□□□□□ -0.47
GDE1-205ENST00000569899 SH3D19Q5HYK7 790 aa12.15□□□□□ -0.47
GDE1-205ENST00000569899 TTC39AQ5SRH9 613 aa12.15□□□□□ -0.47
GDE1-205ENST00000569899 GORABQ5T7V8 394 aa12.15□□□□□ -0.47
GDE1-205ENST00000569899 SLC16A10Q8TF71 515 aa12.15□□□□□ -0.47
GDE1-205ENST00000569899 DNAJC2Q99543 621 aaKnown RBP12.15□□□□□ -0.47
GDE1-205ENST00000569899 RBM19Q9Y4C8 960 aaKnown RBP12.15□□□□□ -0.47
GDE1-205ENST00000569899 DUOX1Q9NRD9 1551 aa12.14□□□□□ -0.47
GDE1-205ENST00000569899 ZBTB7AO95365 584 aa12.14□□□□□ -0.47
GDE1-205ENST00000569899 IFIT1P09914 478 aaKnown RBP12.14□□□□□ -0.47
GDE1-205ENST00000569899 SRGNP10124 158 aa12.14□□□□□ -0.47
GDE1-205ENST00000569899 PDE6BP35913 854 aa12.14□□□□□ -0.47
GDE1-205ENST00000569899 BRCA1P38398 1863 aaKnown RBP12.14□□□□□ -0.47
GDE1-205ENST00000569899 PHKA1P46020 1223 aa12.14□□□□□ -0.47
GDE1-205ENST00000569899 PTPN5P54829 565 aa12.14□□□□□ -0.47
GDE1-205ENST00000569899 FUT2Q10981 343 aa12.14□□□□□ -0.47
GDE1-205ENST00000569899 SCARF1Q14162 830 aa12.14□□□□□ -0.47
GDE1-205ENST00000569899 DIXDC1Q155Q3 683 aa12.14□□□□□ -0.47
GDE1-205ENST00000569899 CRAMP1Q96RY5 1269 aa12.14□□□□□ -0.47
GDE1-205ENST00000569899 HAUS7Q99871 368 aa12.14□□□□□ -0.47
GDE1-205ENST00000569899 ACTN4O43707 911 aaKnown RBP12.13□□□□□ -0.47
GDE1-205ENST00000569899 CCDC158Q5M9N0 1113 aa12.13□□□□□ -0.47
GDE1-205ENST00000569899 EVI5LQ96CN4 794 aa12.13□□□□□ -0.47
GDE1-205ENST00000569899 GOPCQ9HD26 462 aa12.13□□□□□ -0.47
GDE1-205ENST00000569899 COL1A1P02452 1464 aaPredicted RBP12.13□□□□□ -0.47
GDE1-205ENST00000569899 PPEF1O14829 653 aaPredicted RBP12.12□□□□□ -0.47
GDE1-205ENST00000569899 NPR1P16066 1061 aa12.12□□□□□ -0.47
GDE1-205ENST00000569899 CHMLP26374 656 aa12.12□□□□□ -0.47
GDE1-205ENST00000569899 KLRK1P26718 216 aa12.12□□□□□ -0.47
GDE1-205ENST00000569899 USP46P62068 366 aa12.12□□□□□ -0.47
GDE1-205ENST00000569899 CCDC102BQ68D86 513 aa12.12□□□□□ -0.47
GDE1-205ENST00000569899 PI16Q6UXB8 463 aa12.12□□□□□ -0.47
GDE1-205ENST00000569899 C2CD5Q86YS7 1000 aa12.12□□□□□ -0.47
GDE1-205ENST00000569899 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.12□□□□□ -0.47
GDE1-205ENST00000569899 RNF166Q96A37 237 aaPredicted RBP12.12□□□□□ -0.47
GDE1-205ENST00000569899 POLR3EQ9NVU0 708 aa12.12□□□□□ -0.47
GDE1-205ENST00000569899 MAST2Q6P0Q8 1798 aa12.12□□□□□ -0.47
GDE1-205ENST00000569899 MOXD2PA6NHM9 499 aa12.11□□□□□ -0.47
GDE1-205ENST00000569899 HOXA2O43364 376 aa12.11□□□□□ -0.47
GDE1-205ENST00000569899 ARID4AP29374 1257 aaPredicted RBP12.11□□□□□ -0.47
GDE1-205ENST00000569899 CHRNA5P30532 468 aa12.11□□□□□ -0.47
GDE1-205ENST00000569899 MCAMP43121 646 aa12.11□□□□□ -0.47
GDE1-205ENST00000569899 KCNJ4P48050 445 aa12.11□□□□□ -0.47
GDE1-205ENST00000569899 UBE4AQ14139 1066 aa12.11□□□□□ -0.47
GDE1-205ENST00000569899 SKIV2LQ15477 1246 aaKnown RBP12.11□□□□□ -0.47
GDE1-205ENST00000569899 CASC1Q6TDU7 716 aa12.11□□□□□ -0.47
GDE1-205ENST00000569899 ILDR2Q71H61 639 aa12.11□□□□□ -0.47
GDE1-205ENST00000569899 MASTLQ96GX5 879 aa12.11□□□□□ -0.47
GDE1-205ENST00000569899 FSD1Q9BTV5 496 aa12.11□□□□□ -0.47
GDE1-205ENST00000569899 ANKRD2Q9GZV1 360 aa12.11□□□□□ -0.47
GDE1-205ENST00000569899 IL25Q9H293 177 aa12.11□□□□□ -0.47
GDE1-205ENST00000569899 SNRKQ9NRH2 765 aa12.11□□□□□ -0.47
GDE1-205ENST00000569899 PAG1Q9NWQ8 432 aa12.11□□□□□ -0.47
GDE1-205ENST00000569899 GOLIM4O00461 696 aa12.11□□□□□ -0.47
GDE1-205ENST00000569899 NDUFV2P19404 249 aa12.11□□□□□ -0.47
GDE1-205ENST00000569899 GPSM2P81274 684 aa12.11□□□□□ -0.47
GDE1-205ENST00000569899 PRR14Q9BWN1 585 aa12.11□□□□□ -0.47
GDE1-205ENST00000569899 MTFR1LQ9H019 292 aa12.11□□□□□ -0.47
GDE1-205ENST00000569899 ANTXR1Q9H6X2 564 aa12.11□□□□□ -0.47
GDE1-205ENST00000569899 RFX7Q2KHR2 1363 aa12.11□□□□□ -0.47
GDE1-205ENST00000569899 ZNF804BA4D1E1 1349 aa12.1□□□□□ -0.47
GDE1-205ENST00000569899 XDHP47989 1333 aa12.1□□□□□ -0.47
GDE1-205ENST00000569899 BBOX1O75936 387 aa12.1□□□□□ -0.47
GDE1-205ENST00000569899 ZAP70P43403 619 aa12.1□□□□□ -0.47
GDE1-205ENST00000569899 GYG1P46976 350 aa12.1□□□□□ -0.47
GDE1-205ENST00000569899 HLA-CQ95604 372 aa12.1□□□□□ -0.47
GDE1-205ENST00000569899 ZNF622Q969S3 477 aaKnown RBP eCLIP12.1□□□□□ -0.47
GDE1-205ENST00000569899 ZNF512BQ96KM6 892 aaPredicted RBP12.1□□□□□ -0.47
GDE1-205ENST00000569899 ESYT1Q9BSJ8 1104 aa12.1□□□□□ -0.47
GDE1-205ENST00000569899 ANKIB1Q9P2G1 1089 aa12.1□□□□□ -0.47
GDE1-205ENST00000569899 IRS2Q9Y4H2 1338 aa12.1□□□□□ -0.47
GDE1-205ENST00000569899 H0YIN7 160 aa12.09□□□□□ -0.47
GDE1-205ENST00000569899 CHGBP05060 677 aa12.09□□□□□ -0.47
GDE1-205ENST00000569899 UQCRFS1P1P0C7P4 283 aa12.09□□□□□ -0.47
GDE1-205ENST00000569899 FKBP4Q02790 459 aaKnown RBP eCLIP12.09□□□□□ -0.47
GDE1-205ENST00000569899 RASGRF1Q13972 1273 aa12.09□□□□□ -0.47
GDE1-205ENST00000569899 OLFM4Q6UX06 510 aa12.09□□□□□ -0.47
GDE1-205ENST00000569899 KBTBD3Q8NAB2 608 aa12.09□□□□□ -0.47
GDE1-205ENST00000569899 GPR101Q96P66 508 aaPredicted RBP12.09□□□□□ -0.47
GDE1-205ENST00000569899 UPF2Q9HAU5 1272 aaKnown RBP12.09□□□□□ -0.47
GDE1-205ENST00000569899 DIAPH3Q9NSV4 1193 aa12.09□□□□□ -0.47
GDE1-205ENST00000569899 LIMD1Q9UGP4 676 aa12.09□□□□□ -0.47
GDE1-205ENST00000569899 CCDC88AQ3V6T2 1871 aa12.09□□□□□ -0.47
GDE1-205ENST00000569899 CHD4Q14839 1912 aa12.09□□□□□ -0.47
GDE1-205ENST00000569899 UFL1O94874 794 aa12.08□□□□□ -0.48
GDE1-205ENST00000569899 CLK2P49760 499 aaKnown RBP12.08□□□□□ -0.48
GDE1-205ENST00000569899 STYK1Q6J9G0 422 aa12.08□□□□□ -0.48
GDE1-205ENST00000569899 RSBN1LQ6PCB5 846 aaPredicted RBP12.08□□□□□ -0.48
GDE1-205ENST00000569899 CWC27Q6UX04 472 aaKnown RBP12.08□□□□□ -0.48
GDE1-205ENST00000569899 TMC4Q7Z404 712 aa12.08□□□□□ -0.48
GDE1-205ENST00000569899 PROCA1Q8NCQ7 364 aaPredicted RBP12.08□□□□□ -0.48
GDE1-205ENST00000569899 HMG20BQ9P0W2 317 aa12.08□□□□□ -0.48
GDE1-205ENST00000569899 IQSEC3Q9UPP2 1182 aaPredicted RBP12.08□□□□□ -0.48
GDE1-205ENST00000569899 ATP6V0A2Q9Y487 856 aa12.08□□□□□ -0.48
GDE1-205ENST00000569899 A0A0D9SFI3 127 aa12.08□□□□□ -0.48
GDE1-205ENST00000569899 SPTLC1O15269 473 aa12.08□□□□□ -0.48
GDE1-205ENST00000569899 ALDH1B1P30837 517 aa12.08□□□□□ -0.48
GDE1-205ENST00000569899 GUCA2AQ02747 115 aa12.08□□□□□ -0.48
GDE1-205ENST00000569899 NMIQ13287 307 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms