RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 KCNJ4P48050 445 aa14.56□□□□□ -0.08
CDH3-208ENST00000569036 LRRC26Q2I0M4 334 aa14.56□□□□□ -0.08
CDH3-208ENST00000569036 HYPKQ9NX55 129 aa14.56□□□□□ -0.08
CDH3-208ENST00000569036 ARIH1Q9Y4X5 557 aaPredicted RBP14.56□□□□□ -0.08
CDH3-208ENST00000569036 SNAP23O00161 211 aa14.55□□□□□ -0.08
CDH3-208ENST00000569036 HMGCRP04035 888 aa14.55□□□□□ -0.08
CDH3-208ENST00000569036 COL6A1P12109 1028 aa14.55□□□□□ -0.08
CDH3-208ENST00000569036 GOLGA2Q08379 1002 aa14.55□□□□□ -0.08
CDH3-208ENST00000569036 GPAT2Q6NUI2 795 aa14.55□□□□□ -0.08
CDH3-208ENST00000569036 DZIP1LQ8IYY4 767 aaKnown RBP14.55□□□□□ -0.08
CDH3-208ENST00000569036 SERPINA10Q9UK55 444 aa14.55□□□□□ -0.08
CDH3-208ENST00000569036 IGHMBP2P38935 993 aaKnown RBP14.54□□□□□ -0.08
CDH3-208ENST00000569036 C15orf52Q6ZUT6 534 aaKnown RBP14.54□□□□□ -0.08
CDH3-208ENST00000569036 ADAMTS19Q8TE59 1207 aa14.54□□□□□ -0.08
CDH3-208ENST00000569036 LBHD1Q9BQE6 289 aaPredicted RBP14.54□□□□□ -0.08
CDH3-208ENST00000569036 HMX1Q9NP08 348 aaPredicted RBP14.54□□□□□ -0.08
CDH3-208ENST00000569036 INPP5BP32019 993 aa14.53□□□□□ -0.08
CDH3-208ENST00000569036 TRIM32Q13049 653 aa14.53□□□□□ -0.08
CDH3-208ENST00000569036 TTF2Q9UNY4 1162 aaKnown RBP14.53□□□□□ -0.08
CDH3-208ENST00000569036 MAPK8IP3Q9UPT6 1336 aa14.52□□□□□ -0.08
CDH3-208ENST00000569036 HOXB7P09629 217 aa14.52□□□□□ -0.09
CDH3-208ENST00000569036 CACNB3P54284 484 aa14.52□□□□□ -0.09
CDH3-208ENST00000569036 SMAD3P84022 425 aaKnown RBP14.52□□□□□ -0.09
CDH3-208ENST00000569036 CHRNDQ07001 517 aa14.52□□□□□ -0.09
CDH3-208ENST00000569036 ZNF804AQ7Z570 1209 aa14.52□□□□□ -0.09
CDH3-208ENST00000569036 COA7Q96BR5 231 aa14.52□□□□□ -0.09
CDH3-208ENST00000569036 HCN4Q9Y3Q4 1203 aa14.52□□□□□ -0.09
CDH3-208ENST00000569036 MUC6Q6W4X9 2439 aa14.52□□□□□ -0.09
CDH3-208ENST00000569036 AK9Q5TCS8 1911 aa14.51□□□□□ -0.09
CDH3-208ENST00000569036 CRKP46108 304 aa14.51□□□□□ -0.09
CDH3-208ENST00000569036 SHHQ15465 462 aa14.51□□□□□ -0.09
CDH3-208ENST00000569036 DCAF15Q66K64 600 aa14.51□□□□□ -0.09
CDH3-208ENST00000569036 CCER1Q8TC90 406 aaPredicted RBP14.51□□□□□ -0.09
CDH3-208ENST00000569036 HOOK2Q96ED9 719 aa14.51□□□□□ -0.09
CDH3-208ENST00000569036 UHRF1Q96T88 793 aaPredicted RBP14.51□□□□□ -0.09
CDH3-208ENST00000569036 C1QTNF1Q9BXJ1 281 aa14.51□□□□□ -0.09
CDH3-208ENST00000569036 ZNF341Q9BYN7 854 aa14.51□□□□□ -0.09
CDH3-208ENST00000569036 MFSD14BQ5SR56 506 aa14.5□□□□□ -0.09
CDH3-208ENST00000569036 C9orf50Q5SZB4 431 aa14.5□□□□□ -0.09
CDH3-208ENST00000569036 ATXN2LQ8WWM7 1075 aaKnown RBP14.5□□□□□ -0.09
CDH3-208ENST00000569036 MPHOSPH8Q99549 860 aa14.5□□□□□ -0.09
CDH3-208ENST00000569036 PHAXQ9H814 394 aaKnown RBP14.5□□□□□ -0.09
CDH3-208ENST00000569036 PTPRFP10586 1907 aa14.5□□□□□ -0.09
CDH3-208ENST00000569036 RPAP1Q9BWH6 1393 aaPredicted RBP14.49□□□□□ -0.09
CDH3-208ENST00000569036 CACNA1AO00555 2505 aa14.49□□□□□ -0.09
CDH3-208ENST00000569036 CHL1O00533 1208 aa14.49□□□□□ -0.09
CDH3-208ENST00000569036 RIPK4P57078 832 aa14.49□□□□□ -0.09
CDH3-208ENST00000569036 MIGA2Q7L4E1 593 aa14.49□□□□□ -0.09
CDH3-208ENST00000569036 ASB2Q96Q27 587 aa14.49□□□□□ -0.09
CDH3-208ENST00000569036 PLXNB2O15031 1838 aa14.49□□□□□ -0.09
CDH3-208ENST00000569036 FRMPD3Q5JV73 1810 aa14.48□□□□□ -0.09
CDH3-208ENST00000569036 TAF5LO75529 589 aa14.48□□□□□ -0.09
CDH3-208ENST00000569036 ITGA6P23229 1130 aa14.48□□□□□ -0.09
CDH3-208ENST00000569036 FAM83AQ86UY5 434 aa14.48□□□□□ -0.09
CDH3-208ENST00000569036 METTL22Q9BUU2 404 aaPredicted RBP14.48□□□□□ -0.09
CDH3-208ENST00000569036 CXCL11O14625 94 aa14.47□□□□□ -0.09
CDH3-208ENST00000569036 NOL9Q5SY16 702 aaKnown RBP14.47□□□□□ -0.09
CDH3-208ENST00000569036 MAP3K21Q5TCX8 1036 aa14.47□□□□□ -0.09
CDH3-208ENST00000569036 ALYREFQ86V81 257 aaKnown RBP14.47□□□□□ -0.09
CDH3-208ENST00000569036 SMCR8Q8TEV9 937 aaPredicted RBP14.47□□□□□ -0.09
CDH3-208ENST00000569036 THEGQ9P2T0 379 aa14.47□□□□□ -0.09
CDH3-208ENST00000569036 ZNF112Q9UJU3 913 aa14.47□□□□□ -0.09
CDH3-208ENST00000569036 XIRP2A4UGR9 3374 aa14.47□□□□□ -0.09
CDH3-208ENST00000569036 A0A0G2JLL6 359 aaPredicted RBP14.46□□□□□ -0.09
CDH3-208ENST00000569036 GRIN2CQ14957 1233 aa14.46□□□□□ -0.09
CDH3-208ENST00000569036 FASTKD5Q7L8L6 764 aaKnown RBP14.46□□□□□ -0.09
CDH3-208ENST00000569036 PRRT2Q7Z6L0 340 aaPredicted RBP14.46□□□□□ -0.09
CDH3-208ENST00000569036 ANKRD13CQ8N6S4 541 aa14.46□□□□□ -0.09
CDH3-208ENST00000569036 TRIB2Q92519 343 aa14.46□□□□□ -0.09
CDH3-208ENST00000569036 SLC45A1Q9Y2W3 748 aa14.46□□□□□ -0.09
CDH3-208ENST00000569036 PRKAR2AP13861 404 aaKnown RBP14.45□□□□□ -0.1
CDH3-208ENST00000569036 DUSP27Q5VZP5 1158 aa14.45□□□□□ -0.1
CDH3-208ENST00000569036 DIEXFQ68CQ4 756 aaKnown RBP14.45□□□□□ -0.1
CDH3-208ENST00000569036 GADL1Q6ZQY3 521 aa14.45□□□□□ -0.1
CDH3-208ENST00000569036 LRFN3Q9BTN0 628 aa14.45□□□□□ -0.1
CDH3-208ENST00000569036 TMOD2Q9NZR1 351 aa14.45□□□□□ -0.1
CDH3-208ENST00000569036 GJD2Q9UKL4 321 aa14.45□□□□□ -0.1
CDH3-208ENST00000569036 REV3LO60673 3130 aa14.45□□□□□ -0.1
CDH3-208ENST00000569036 TCF20Q9UGU0 1960 aaKnown RBP14.44□□□□□ -0.1
CDH3-208ENST00000569036 IGKV5-2P06315 115 aa14.44□□□□□ -0.1
CDH3-208ENST00000569036 MRPS5P82675 430 aaKnown RBP14.44□□□□□ -0.1
CDH3-208ENST00000569036 LMOD3Q0VAK6 560 aa14.44□□□□□ -0.1
CDH3-208ENST00000569036 GRIK5Q16478 980 aa14.44□□□□□ -0.1
CDH3-208ENST00000569036 FAM110CQ1W6H9 321 aa14.44□□□□□ -0.1
CDH3-208ENST00000569036 FKBP1CQ5VVH2 108 aa14.44□□□□□ -0.1
CDH3-208ENST00000569036 PNNQ9H307 717 aaKnown RBP14.44□□□□□ -0.1
CDH3-208ENST00000569036 PRKAG2Q9UGJ0 569 aa14.44□□□□□ -0.1
CDH3-208ENST00000569036 LAS1LQ9Y4W2 734 aaKnown RBP14.44□□□□□ -0.1
CDH3-208ENST00000569036 CLSPNQ9HAW4 1339 aa14.43□□□□□ -0.1
CDH3-208ENST00000569036 LHX8Q68G74 356 aa14.43□□□□□ -0.1
CDH3-208ENST00000569036 TDRD7Q8NHU6 1098 aaKnown RBP14.43□□□□□ -0.1
CDH3-208ENST00000569036 PPM1EQ8WY54 764 aa14.43□□□□□ -0.1
CDH3-208ENST00000569036 NECAB3Q96P71 396 aaPredicted RBP14.43□□□□□ -0.1
CDH3-208ENST00000569036 PHIPQ8WWQ0 1821 aa14.43□□□□□ -0.1
CDH3-208ENST00000569036 UBE3BQ7Z3V4 1068 aa14.42□□□□□ -0.1
CDH3-208ENST00000569036 IL27Q8NEV9 243 aa14.42□□□□□ -0.1
CDH3-208ENST00000569036 MAP3K2Q9Y2U5 619 aa14.42□□□□□ -0.1
CDH3-208ENST00000569036 CHD9Q3L8U1 2897 aa14.42□□□□□ -0.1
CDH3-208ENST00000569036 TMPOP42166 694 aaKnown RBP14.41□□□□□ -0.1
CDH3-208ENST00000569036 HDLBPQ00341 1268 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms