RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 COA1Q9GZY4 146 aa12.84□□□□□ -0.35
VPS9D1-206ENST00000567379 GPBP1L1Q9HC44 474 aaPredicted RBP12.84□□□□□ -0.35
VPS9D1-206ENST00000567379 EPB41L4AQ9HCS5 686 aaPredicted RBP12.84□□□□□ -0.35
VPS9D1-206ENST00000567379 KIAA1551Q9HCM1 1747 aa12.84□□□□□ -0.35
VPS9D1-206ENST00000567379 WDR19Q8NEZ3 1342 aa12.84□□□□□ -0.35
VPS9D1-206ENST00000567379 G3V3G9 751 aa12.83□□□□□ -0.36
VPS9D1-206ENST00000567379 PRKAB2O43741 272 aa12.83□□□□□ -0.36
VPS9D1-206ENST00000567379 PRDX5P30044 214 aa12.83□□□□□ -0.36
VPS9D1-206ENST00000567379 COL9A3Q14050 684 aaPredicted RBP12.83□□□□□ -0.36
VPS9D1-206ENST00000567379 DCAF8Q5TAQ9 597 aa12.83□□□□□ -0.36
VPS9D1-206ENST00000567379 GIMAP6Q6P9H5 292 aa12.83□□□□□ -0.36
VPS9D1-206ENST00000567379 MB21D2Q8IYB1 491 aaPredicted RBP12.83□□□□□ -0.36
VPS9D1-206ENST00000567379 FBXL16Q8N461 479 aa12.83□□□□□ -0.36
VPS9D1-206ENST00000567379 BRF1Q92994 677 aa12.83□□□□□ -0.36
VPS9D1-206ENST00000567379 CNNM2Q9H8M5 875 aa12.83□□□□□ -0.36
VPS9D1-206ENST00000567379 JAG2Q9Y219 1238 aa12.83□□□□□ -0.36
VPS9D1-206ENST00000567379 GOLGB1Q14789 3259 aaKnown RBP12.82□□□□□ -0.36
VPS9D1-206ENST00000567379 DDX11L8A8MPP1 907 aa12.82□□□□□ -0.36
VPS9D1-206ENST00000567379 RIMBP2O15034 1052 aa12.82□□□□□ -0.36
VPS9D1-206ENST00000567379 PRC1O43663 620 aa12.82□□□□□ -0.36
VPS9D1-206ENST00000567379 PTMSP20962 102 aa12.82□□□□□ -0.36
VPS9D1-206ENST00000567379 MCM4P33991 863 aa12.82□□□□□ -0.36
VPS9D1-206ENST00000567379 DYNLL1P63167 89 aaKnown RBP12.82□□□□□ -0.36
VPS9D1-206ENST00000567379 CC2D2BQ6DHV5 1058 aa12.82□□□□□ -0.36
VPS9D1-206ENST00000567379 CERS3Q8IU89 383 aa12.82□□□□□ -0.36
VPS9D1-206ENST00000567379 SLF2Q8IX21 1173 aa12.82□□□□□ -0.36
VPS9D1-206ENST00000567379 NECAB1Q8N987 351 aa12.82□□□□□ -0.36
VPS9D1-206ENST00000567379 ZNF384Q8TF68 577 aa12.82□□□□□ -0.36
VPS9D1-206ENST00000567379 LRRC2Q9BYS8 371 aa12.82□□□□□ -0.36
VPS9D1-206ENST00000567379 AGXT2Q9BYV1 514 aa12.82□□□□□ -0.36
VPS9D1-206ENST00000567379 KRT23Q9C075 422 aa12.82□□□□□ -0.36
VPS9D1-206ENST00000567379 RNF41Q9H4P4 317 aaPredicted RBP12.82□□□□□ -0.36
VPS9D1-206ENST00000567379 FAM205AQ6ZU69 1335 aa12.82□□□□□ -0.36
VPS9D1-206ENST00000567379 C10orf71Q711Q0 1435 aa12.81□□□□□ -0.36
VPS9D1-206ENST00000567379 GOLGA6L22H0YM25 854 aa12.81□□□□□ -0.36
VPS9D1-206ENST00000567379 GRIN3BO60391 1043 aa12.81□□□□□ -0.36
VPS9D1-206ENST00000567379 PFKFB2O60825 505 aa12.81□□□□□ -0.36
VPS9D1-206ENST00000567379 BAG3O95817 575 aa12.81□□□□□ -0.36
VPS9D1-206ENST00000567379 PDIA4P13667 645 aaKnown RBP12.81□□□□□ -0.36
VPS9D1-206ENST00000567379 CHRNA5P30532 468 aa12.81□□□□□ -0.36
VPS9D1-206ENST00000567379 AKNAD1Q5T1N1 836 aa12.81□□□□□ -0.36
VPS9D1-206ENST00000567379 MFSD6Q6ZSS7 791 aa12.81□□□□□ -0.36
VPS9D1-206ENST00000567379 TBC1D10CQ8IV04 446 aa12.81□□□□□ -0.36
VPS9D1-206ENST00000567379 ZNF274Q96GC6 653 aaPredicted RBP12.81□□□□□ -0.36
VPS9D1-206ENST00000567379 NBPF3Q9H094 633 aa12.81□□□□□ -0.36
VPS9D1-206ENST00000567379 AATFQ9NY61 560 aaKnown RBP eCLIP12.81□□□□□ -0.36
VPS9D1-206ENST00000567379 TIAM2Q8IVF5 1701 aa12.81□□□□□ -0.36
VPS9D1-206ENST00000567379 WDR33Q9C0J8 1336 aaKnown RBP12.81□□□□□ -0.36
VPS9D1-206ENST00000567379 GJB2P29033 226 aa12.8□□□□□ -0.36
VPS9D1-206ENST00000567379 APLP1P51693 650 aa12.8□□□□□ -0.36
VPS9D1-206ENST00000567379 CTDSPL2Q05D32 466 aa12.8□□□□□ -0.36
VPS9D1-206ENST00000567379 PPARAQ07869 468 aa12.8□□□□□ -0.36
VPS9D1-206ENST00000567379 APOBRQ0VD83 1088 aa12.8□□□□□ -0.36
VPS9D1-206ENST00000567379 STK3Q13188 491 aa12.8□□□□□ -0.36
VPS9D1-206ENST00000567379 GRIPAP1Q4V328 841 aa12.8□□□□□ -0.36
VPS9D1-206ENST00000567379 MFSD14BQ5SR56 506 aa12.8□□□□□ -0.36
VPS9D1-206ENST00000567379 OLFM4Q6UX06 510 aa12.8□□□□□ -0.36
VPS9D1-206ENST00000567379 CLEC17AQ6ZS10 378 aa12.8□□□□□ -0.36
VPS9D1-206ENST00000567379 CHST3Q7LGC8 479 aa12.8□□□□□ -0.36
VPS9D1-206ENST00000567379 TNS4Q8IZW8 715 aa12.8□□□□□ -0.36
VPS9D1-206ENST00000567379 SDR42E1Q8WUS8 393 aa12.8□□□□□ -0.36
VPS9D1-206ENST00000567379 STAG1Q8WVM7 1258 aa12.8□□□□□ -0.36
VPS9D1-206ENST00000567379 GTF3C6Q969F1 213 aa12.8□□□□□ -0.36
VPS9D1-206ENST00000567379 ATP8A2Q9NTI2 1148 aa12.8□□□□□ -0.36
VPS9D1-206ENST00000567379 ANAPC4Q9UJX5 808 aa12.8□□□□□ -0.36
VPS9D1-206ENST00000567379 SUGT1Q9Y2Z0 365 aa12.8□□□□□ -0.36
VPS9D1-206ENST00000567379 SLX4Q8IY92 1834 aa12.8□□□□□ -0.36
VPS9D1-206ENST00000567379 MINDY4BA8MYZ0 360 aa12.79□□□□□ -0.36
VPS9D1-206ENST00000567379 B4E1Z4 1266 aa12.79□□□□□ -0.36
VPS9D1-206ENST00000567379 BRD1O95696 1058 aa12.79□□□□□ -0.36
VPS9D1-206ENST00000567379 PLCG2P16885 1265 aa12.79□□□□□ -0.36
VPS9D1-206ENST00000567379 PDCP20941 246 aa12.79□□□□□ -0.36
VPS9D1-206ENST00000567379 ANTXR2P58335 489 aa12.79□□□□□ -0.36
VPS9D1-206ENST00000567379 PPP4CP60510 307 aa12.79□□□□□ -0.36
VPS9D1-206ENST00000567379 GTF2IP78347 998 aa12.79□□□□□ -0.36
VPS9D1-206ENST00000567379 ST3GAL1Q11201 340 aa12.79□□□□□ -0.36
VPS9D1-206ENST00000567379 COL13A1Q5TAT6 717 aaPredicted RBP12.79□□□□□ -0.36
VPS9D1-206ENST00000567379 KLHL34Q8N239 644 aa12.79□□□□□ -0.36
VPS9D1-206ENST00000567379 SUPT20HQ8NEM7 779 aa12.79□□□□□ -0.36
VPS9D1-206ENST00000567379 FBXW7Q969H0 707 aa12.79□□□□□ -0.36
VPS9D1-206ENST00000567379 TMEM87BQ96K49 555 aa12.79□□□□□ -0.36
VPS9D1-206ENST00000567379 LLPHQ9BRT6 129 aaKnown RBP12.79□□□□□ -0.36
VPS9D1-206ENST00000567379 PCDH10Q9P2E7 1040 aa12.79□□□□□ -0.36
VPS9D1-206ENST00000567379 NAP1L2Q9ULW6 460 aaPredicted RBP12.79□□□□□ -0.36
VPS9D1-206ENST00000567379 MYH2Q9UKX2 1941 aa12.79□□□□□ -0.36
VPS9D1-206ENST00000567379 MROH7-TTC4A0A0A0MT08 1334 aa12.79□□□□□ -0.36
VPS9D1-206ENST00000567379 BAG4O95429 457 aaKnown RBP12.78□□□□□ -0.36
VPS9D1-206ENST00000567379 SLC3A2P08195 630 aaKnown RBP12.78□□□□□ -0.36
VPS9D1-206ENST00000567379 PCP11498 1178 aaKnown RBP12.78□□□□□ -0.36
VPS9D1-206ENST00000567379 EVCP57679 992 aa12.78□□□□□ -0.36
VPS9D1-206ENST00000567379 PKP1Q13835 747 aa12.78□□□□□ -0.36
VPS9D1-206ENST00000567379 SART3Q15020 963 aaKnown RBP12.78□□□□□ -0.36
VPS9D1-206ENST00000567379 DOK7Q18PE1 504 aa12.78□□□□□ -0.36
VPS9D1-206ENST00000567379 PODNQ7Z5L7 613 aa12.78□□□□□ -0.36
VPS9D1-206ENST00000567379 TTLL6Q8N841 843 aa12.78□□□□□ -0.36
VPS9D1-206ENST00000567379 RTFDC1Q9BY42 306 aaPredicted RBP12.78□□□□□ -0.36
VPS9D1-206ENST00000567379 TOMM22Q9NS69 142 aa12.78□□□□□ -0.36
VPS9D1-206ENST00000567379 ZNF219Q9P2Y4 722 aaPredicted RBP12.78□□□□□ -0.36
VPS9D1-206ENST00000567379 ZDHHC9Q9Y397 364 aa12.78□□□□□ -0.36
VPS9D1-206ENST00000567379 NEDD4P46934 1319 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms