RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 ARNTP27540 789 aa14.1□□□□□ -0.15
NIFKP4-201ENST00000567275 ITGAEP38570 1179 aa14.1□□□□□ -0.15
NIFKP4-201ENST00000567275 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.1□□□□□ -0.15
NIFKP4-201ENST00000567275 SORBS3O60504 671 aa14.09□□□□□ -0.15
NIFKP4-201ENST00000567275 TIAF1O95411 115 aa14.09□□□□□ -0.15
NIFKP4-201ENST00000567275 SOX4Q06945 474 aaPredicted RBP14.09□□□□□ -0.15
NIFKP4-201ENST00000567275 CCDC86Q9H6F5 360 aaKnown RBP14.09□□□□□ -0.15
NIFKP4-201ENST00000567275 RAXQ9Y2V3 346 aa14.09□□□□□ -0.15
NIFKP4-201ENST00000567275 AOC2O75106 756 aa14.08□□□□□ -0.16
NIFKP4-201ENST00000567275 ADH5P11766 374 aa14.08□□□□□ -0.16
NIFKP4-201ENST00000567275 BMP3P12645 472 aa14.08□□□□□ -0.16
NIFKP4-201ENST00000567275 LIG1P18858 919 aa14.08□□□□□ -0.16
NIFKP4-201ENST00000567275 STK35Q8TDR2 534 aa14.08□□□□□ -0.16
NIFKP4-201ENST00000567275 BCL11AQ9H165 835 aa14.08□□□□□ -0.16
NIFKP4-201ENST00000567275 KCNF1Q9H3M0 494 aa14.08□□□□□ -0.16
NIFKP4-201ENST00000567275 HIF3AQ9Y2N7 669 aa14.08□□□□□ -0.16
NIFKP4-201ENST00000567275 CC2D2AQ9P2K1 1620 aa14.08□□□□□ -0.16
NIFKP4-201ENST00000567275 CECR2Q9BXF3 1484 aa14.07□□□□□ -0.16
NIFKP4-201ENST00000567275 USP11P51784 963 aa14.07□□□□□ -0.16
NIFKP4-201ENST00000567275 PDZD3Q86UT5 571 aa14.07□□□□□ -0.16
NIFKP4-201ENST00000567275 KRT82Q9NSB4 513 aa14.07□□□□□ -0.16
NIFKP4-201ENST00000567275 STOML1Q9UBI4 398 aa14.07□□□□□ -0.16
NIFKP4-201ENST00000567275 VTI1BQ9UEU0 232 aa14.07□□□□□ -0.16
NIFKP4-201ENST00000567275 AP4E1Q9UPM8 1137 aa14.07□□□□□ -0.16
NIFKP4-201ENST00000567275 PAGE1O75459 146 aa14.06□□□□□ -0.16
NIFKP4-201ENST00000567275 CELA3AP09093 270 aa14.06□□□□□ -0.16
NIFKP4-201ENST00000567275 MAP1SQ66K74 1059 aaPredicted RBP14.06□□□□□ -0.16
NIFKP4-201ENST00000567275 SV2BQ7L1I2 683 aa14.06□□□□□ -0.16
NIFKP4-201ENST00000567275 FAM20CQ8IXL6 584 aa14.06□□□□□ -0.16
NIFKP4-201ENST00000567275 WDR18Q9BV38 432 aa14.06□□□□□ -0.16
NIFKP4-201ENST00000567275 RXRBP28702 533 aa14.05□□□□□ -0.16
NIFKP4-201ENST00000567275 EIF4G1Q04637 1599 aaKnown RBP14.05□□□□□ -0.16
NIFKP4-201ENST00000567275 SCRIBQ14160 1630 aa14.04□□□□□ -0.16
NIFKP4-201ENST00000567275 SLFN14P0C7P3 912 aa14.04□□□□□ -0.16
NIFKP4-201ENST00000567275 CCDC85BQ15834 202 aaPredicted RBP14.04□□□□□ -0.16
NIFKP4-201ENST00000567275 DYMQ7RTS9 669 aa14.04□□□□□ -0.16
NIFKP4-201ENST00000567275 C2CD4AQ8NCU7 369 aaPredicted RBP14.04□□□□□ -0.16
NIFKP4-201ENST00000567275 BMP6P22004 513 aa14.03□□□□□ -0.16
NIFKP4-201ENST00000567275 LRRC14Q15048 493 aa14.03□□□□□ -0.16
NIFKP4-201ENST00000567275 SGO2Q562F6 1265 aa14.03□□□□□ -0.16
NIFKP4-201ENST00000567275 MEI1Q5TIA1 1274 aa14.03□□□□□ -0.16
NIFKP4-201ENST00000567275 WDR89Q96FK6 387 aaPredicted RBP14.03□□□□□ -0.16
NIFKP4-201ENST00000567275 ZNF862O60290 1169 aa14.02□□□□□ -0.17
NIFKP4-201ENST00000567275 PRSS36Q5K4E3 855 aa14.02□□□□□ -0.17
NIFKP4-201ENST00000567275 PCNX4Q63HM2 1172 aa14.02□□□□□ -0.17
NIFKP4-201ENST00000567275 BEND4Q6ZU67 534 aa14.02□□□□□ -0.17
NIFKP4-201ENST00000567275 CLEC10AQ8IUN9 316 aa14.02□□□□□ -0.17
NIFKP4-201ENST00000567275 ACSBG1Q96GR2 724 aa14.02□□□□□ -0.17
NIFKP4-201ENST00000567275 YIPF2Q9BWQ6 316 aa14.02□□□□□ -0.17
NIFKP4-201ENST00000567275 SYNGAP1Q96PV0 1343 aa14.01□□□□□ -0.17
NIFKP4-201ENST00000567275 MAP4P27816 1152 aaKnown RBP14.01□□□□□ -0.17
NIFKP4-201ENST00000567275 ZNF252P-AS1Q0IIN9 211 aa14.01□□□□□ -0.17
NIFKP4-201ENST00000567275 TAF1CQ15572 869 aaPredicted RBP14.01□□□□□ -0.17
NIFKP4-201ENST00000567275 LLGL2Q6P1M3 1020 aa14.01□□□□□ -0.17
NIFKP4-201ENST00000567275 GRIN3AQ8TCU5 1115 aa14.01□□□□□ -0.17
NIFKP4-201ENST00000567275 CRELD1Q96HD1 420 aa14.01□□□□□ -0.17
NIFKP4-201ENST00000567275 ACTL7BQ9Y614 415 aa14.01□□□□□ -0.17
NIFKP4-201ENST00000567275 CTSHP09668 335 aa14□□□□□ -0.17
NIFKP4-201ENST00000567275 KIF4BQ2VIQ3 1234 aa14□□□□□ -0.17
NIFKP4-201ENST00000567275 ASPAP45381 313 aa13.99□□□□□ -0.17
NIFKP4-201ENST00000567275 TRIM42Q8IWZ5 723 aa13.99□□□□□ -0.17
NIFKP4-201ENST00000567275 GPBAR1Q8TDU6 330 aa13.99□□□□□ -0.17
NIFKP4-201ENST00000567275 FAM83CQ9BQN1 747 aa13.99□□□□□ -0.17
NIFKP4-201ENST00000567275 C7orf69Q9H7B7 122 aa13.99□□□□□ -0.17
NIFKP4-201ENST00000567275 PPP1R9AQ9ULJ8 1098 aa13.99□□□□□ -0.17
NIFKP4-201ENST00000567275 CYP8B1Q9UNU6 501 aa13.99□□□□□ -0.17
NIFKP4-201ENST00000567275 HMX2A2RU54 273 aa13.98□□□□□ -0.17
NIFKP4-201ENST00000567275 FSTP19883 344 aa13.98□□□□□ -0.17
NIFKP4-201ENST00000567275 ID3Q02535 119 aa13.98□□□□□ -0.17
NIFKP4-201ENST00000567275 TTBK2Q6IQ55 1244 aa13.98□□□□□ -0.17
NIFKP4-201ENST00000567275 CDPF1Q6NVV7 123 aa13.98□□□□□ -0.17
NIFKP4-201ENST00000567275 FBLIM1Q8WUP2 373 aa13.98□□□□□ -0.17
NIFKP4-201ENST00000567275 TMPRSS2O15393 492 aa13.97□□□□□ -0.17
NIFKP4-201ENST00000567275 TRIM37O94972 964 aa13.97□□□□□ -0.17
NIFKP4-201ENST00000567275 ZNF16P17020 682 aaPredicted RBP13.97□□□□□ -0.17
NIFKP4-201ENST00000567275 RAB6AP20340 208 aa13.97□□□□□ -0.17
NIFKP4-201ENST00000567275 GSC2O15499 205 aa13.96□□□□□ -0.17
NIFKP4-201ENST00000567275 LMNB1P20700 586 aa13.96□□□□□ -0.17
NIFKP4-201ENST00000567275 ST13P50502 369 aaKnown RBP13.96□□□□□ -0.17
NIFKP4-201ENST00000567275 MPRIPQ6WCQ1 1025 aa13.96□□□□□ -0.17
NIFKP4-201ENST00000567275 CRIM1Q9NZV1 1036 aa13.96□□□□□ -0.17
NIFKP4-201ENST00000567275 USP31Q70CQ4 1352 aa13.96□□□□□ -0.18
NIFKP4-201ENST00000567275 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.95□□□□□ -0.18
NIFKP4-201ENST00000567275 FAM95CA0A1B0GW59 222 aa13.95□□□□□ -0.18
NIFKP4-201ENST00000567275 ITGB7P26010 798 aa13.95□□□□□ -0.18
NIFKP4-201ENST00000567275 NFKBIBQ15653 356 aa13.95□□□□□ -0.18
NIFKP4-201ENST00000567275 MAP3K11Q16584 847 aa13.95□□□□□ -0.18
NIFKP4-201ENST00000567275 RASIP1Q5U651 963 aa13.95□□□□□ -0.18
NIFKP4-201ENST00000567275 ATXN3LQ9H3M9 355 aa13.95□□□□□ -0.18
NIFKP4-201ENST00000567275 FAM105AQ9NUU6 356 aa13.95□□□□□ -0.18
NIFKP4-201ENST00000567275 PAOXQ6QHF9 649 aa13.94□□□□□ -0.18
NIFKP4-201ENST00000567275 PIDD1Q9HB75 910 aa13.94□□□□□ -0.18
NIFKP4-201ENST00000567275 IGLV1-40P01703 118 aa13.93□□□□□ -0.18
NIFKP4-201ENST00000567275 RNF43Q68DV7 783 aa13.93□□□□□ -0.18
NIFKP4-201ENST00000567275 SCARA3Q6AZY7 606 aa13.93□□□□□ -0.18
NIFKP4-201ENST00000567275 SLC51AQ86UW1 340 aa13.93□□□□□ -0.18
NIFKP4-201ENST00000567275 FANCD2OSQ96PS1 177 aa13.93□□□□□ -0.18
NIFKP4-201ENST00000567275 NOC4LQ9BVI4 516 aaKnown RBP13.93□□□□□ -0.18
NIFKP4-201ENST00000567275 GSX1Q9H4S2 264 aaPredicted RBP13.93□□□□□ -0.18
NIFKP4-201ENST00000567275 PCDHGC5Q9Y5F6 944 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms