RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 FGD1P98174 961 aa21.35■■□□□ 1.01
COMMD4-208ENST00000563220 TBC1D22AQ8WUA7 517 aa21.35■■□□□ 1.01
COMMD4-208ENST00000563220 DTNBO60941 627 aa21.35■■□□□ 1.01
COMMD4-208ENST00000563220 MCM5P33992 734 aa21.35■■□□□ 1.01
COMMD4-208ENST00000563220 GSTO1P78417 241 aa21.35■■□□□ 1.01
COMMD4-208ENST00000563220 NUCB2P80303 420 aa21.35■■□□□ 1.01
COMMD4-208ENST00000563220 R3HDM1Q15032 1099 aaKnown RBP21.35■■□□□ 1.01
COMMD4-208ENST00000563220 RALYLQ86SE5 291 aaKnown RBP21.35■■□□□ 1.01
COMMD4-208ENST00000563220 FBXL16Q8N461 479 aa21.35■■□□□ 1.01
COMMD4-208ENST00000563220 GPHNQ9NQX3 736 aaPredicted RBP21.35■■□□□ 1.01
COMMD4-208ENST00000563220 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.35■■□□□ 1.01
COMMD4-208ENST00000563220 PRC1O43663 620 aa21.34■■□□□ 1.01
COMMD4-208ENST00000563220 C21orf2O43822 256 aa21.34■■□□□ 1.01
COMMD4-208ENST00000563220 TRDNQ13061 729 aa21.34■■□□□ 1.01
COMMD4-208ENST00000563220 TTLL6Q8N841 843 aa21.34■■□□□ 1.01
COMMD4-208ENST00000563220 ZDHHC9Q9Y397 364 aa21.34■■□□□ 1.01
COMMD4-208ENST00000563220 NEDD4P46934 1319 aa21.34■■□□□ 1.01
COMMD4-208ENST00000563220 LAMA4Q16363 1823 aa21.34■■□□□ 1.01
COMMD4-208ENST00000563220 SMIM22K7EJ46 135 aa21.33■■□□□ 1.01
COMMD4-208ENST00000563220 APOBRQ0VD83 1088 aa21.33■■□□□ 1.01
COMMD4-208ENST00000563220 STK3Q13188 491 aa21.33■■□□□ 1.01
COMMD4-208ENST00000563220 AKNAD1Q5T1N1 836 aa21.33■■□□□ 1.01
COMMD4-208ENST00000563220 CRNKL1Q9BZJ0 848 aaKnown RBP21.33■■□□□ 1.01
COMMD4-208ENST00000563220 MTFR1LQ9H019 292 aa21.33■■□□□ 1.01
COMMD4-208ENST00000563220 SNED1Q8TER0 1413 aa21.33■■□□□ 1.01
COMMD4-208ENST00000563220 B4E1Z4 1266 aa21.32■■□□□ 1
COMMD4-208ENST00000563220 LDHCP07864 332 aa21.32■■□□□ 1
COMMD4-208ENST00000563220 PPARAQ07869 468 aa21.32■■□□□ 1
COMMD4-208ENST00000563220 CC2D2BQ6DHV5 1058 aa21.32■■□□□ 1
COMMD4-208ENST00000563220 GIMAP6Q6P9H5 292 aa21.32■■□□□ 1
COMMD4-208ENST00000563220 CYB5R4Q7L1T6 521 aa21.32■■□□□ 1
COMMD4-208ENST00000563220 DBNDD1Q9H9R9 158 aa21.32■■□□□ 1
COMMD4-208ENST00000563220 DCP1AQ9NPI6 582 aaPredicted RBP21.32■■□□□ 1
COMMD4-208ENST00000563220 MROH7-TTC4A0A0A0MT08 1334 aa21.32■■□□□ 1
COMMD4-208ENST00000563220 MINDY4BA8MYZ0 360 aa21.32■■□□□ 1
COMMD4-208ENST00000563220 G3V3G9 751 aa21.32■■□□□ 1
COMMD4-208ENST00000563220 PPP4CP60510 307 aa21.32■■□□□ 1
COMMD4-208ENST00000563220 DCAF8Q5TAQ9 597 aa21.32■■□□□ 1
COMMD4-208ENST00000563220 CERS5Q8N5B7 392 aa21.32■■□□□ 1
COMMD4-208ENST00000563220 STAG1Q8WVM7 1258 aa21.32■■□□□ 1
COMMD4-208ENST00000563220 FBXW7Q969H0 707 aa21.32■■□□□ 1
COMMD4-208ENST00000563220 KCNQ5Q9NR82 932 aa21.32■■□□□ 1
COMMD4-208ENST00000563220 ANAPC4Q9UJX5 808 aa21.32■■□□□ 1
COMMD4-208ENST00000563220 CTR9Q6PD62 1173 aa21.31■■□□□ 1
COMMD4-208ENST00000563220 STK11IPQ8N1F8 1099 aa21.31■■□□□ 1
COMMD4-208ENST00000563220 MXD3Q9BW11 206 aa21.31■■□□□ 1
COMMD4-208ENST00000563220 ATP8A2Q9NTI2 1148 aa21.31■■□□□ 1
COMMD4-208ENST00000563220 SMC3Q9UQE7 1217 aa21.31■■□□□ 1
COMMD4-208ENST00000563220 MAST2Q6P0Q8 1798 aa21.31■■□□□ 1
COMMD4-208ENST00000563220 CHD4Q14839 1912 aa21.31■■□□□ 1
COMMD4-208ENST00000563220 WDR19Q8NEZ3 1342 aa21.31■■□□□ 1
COMMD4-208ENST00000563220 CYP2D7A0A087X1C5 515 aa21.3■■□□□ 1
COMMD4-208ENST00000563220 MFSD6Q6ZSS7 791 aa21.3■■□□□ 1
COMMD4-208ENST00000563220 PODNQ7Z5L7 613 aa21.3■■□□□ 1
COMMD4-208ENST00000563220 SH3RF3Q8TEJ3 882 aaPredicted RBP21.3■■□□□ 1
COMMD4-208ENST00000563220 FAM163AQ96GL9 167 aaPredicted RBP21.3■■□□□ 1
COMMD4-208ENST00000563220 USP17L12C9JPN9 530 aa21.3■■□□□ 1
COMMD4-208ENST00000563220 USP17L21D6R901 530 aa21.3■■□□□ 1
COMMD4-208ENST00000563220 BAG3O95817 575 aa21.3■■□□□ 1
COMMD4-208ENST00000563220 POLD1P28340 1107 aa21.3■■□□□ 1
COMMD4-208ENST00000563220 GTF3C6Q969F1 213 aa21.3■■□□□ 1
COMMD4-208ENST00000563220 CCDC88AQ3V6T2 1871 aa21.29■■□□□ 1
COMMD4-208ENST00000563220 GPR75-ASB3A0A0A6YYF3 556 aa21.29■■□□□ 1
COMMD4-208ENST00000563220 PFKFB2O60825 505 aa21.29■■□□□ 1
COMMD4-208ENST00000563220 GJB2P29033 226 aa21.29■■□□□ 1
COMMD4-208ENST00000563220 EVCP57679 992 aa21.29■■□□□ 1
COMMD4-208ENST00000563220 ZSWIM5Q9P217 1185 aa21.29■■□□□ 1
COMMD4-208ENST00000563220 MKRN1Q9UHC7 482 aaKnown RBP21.29■■□□□ 1
COMMD4-208ENST00000563220 PDIA3P30101 505 aaKnown RBP21.28■■□□□ 1
COMMD4-208ENST00000563220 BTDP43251 543 aa21.28■■□□□ 1
COMMD4-208ENST00000563220 EVX2Q03828 476 aa21.28■■□□□ 1
COMMD4-208ENST00000563220 SCRN1Q12765 414 aa21.28■■□□□ 1
COMMD4-208ENST00000563220 AOC3Q16853 763 aa21.28■■□□□ 1
COMMD4-208ENST00000563220 CNNM2Q9H8M5 875 aa21.28■■□□□ 1
COMMD4-208ENST00000563220 SUGT1Q9Y2Z0 365 aa21.28■■□□□ 1
COMMD4-208ENST00000563220 KDM4AO75164 1064 aa21.28■■□□□ 1
COMMD4-208ENST00000563220 BRD1O95696 1058 aa21.28■■□□□ 1
COMMD4-208ENST00000563220 MCM4P33991 863 aa21.28■■□□□ 1
COMMD4-208ENST00000563220 TGFB2P61812 414 aa21.28■■□□□ 1
COMMD4-208ENST00000563220 KIAA2012Q0VF49 1180 aa21.28■■□□□ 1
COMMD4-208ENST00000563220 ZNF274Q96GC6 653 aaPredicted RBP21.28■■□□□ 1
COMMD4-208ENST00000563220 KRT23Q9C075 422 aa21.28■■□□□ 1
COMMD4-208ENST00000563220 BRPF3Q9ULD4 1205 aa21.28■■□□□ 1
COMMD4-208ENST00000563220 GAKO14976 1311 aa21.27■■□□□ 1
COMMD4-208ENST00000563220 F8W031 263 aaPredicted RBP21.27■■□□□ 1
COMMD4-208ENST00000563220 ECE2O60344 883 aa21.27■■□□□ 1
COMMD4-208ENST00000563220 NOL10Q9BSC4 688 aaKnown RBP21.27■■□□□ 1
COMMD4-208ENST00000563220 RNF41Q9H4P4 317 aaPredicted RBP21.27■■□□□ 1
COMMD4-208ENST00000563220 CYP2D6P10635 497 aa21.26■□□□□ 0.99
COMMD4-208ENST00000563220 CCDC93Q567U6 631 aa21.26■□□□□ 0.99
COMMD4-208ENST00000563220 RRP12Q5JTH9 1297 aaKnown RBP21.26■□□□□ 0.99
COMMD4-208ENST00000563220 SLF2Q8IX21 1173 aa21.26■□□□□ 0.99
COMMD4-208ENST00000563220 SUPT20HQ8NEM7 779 aa21.26■□□□□ 0.99
COMMD4-208ENST00000563220 IGDCC4Q8TDY8 1250 aa21.26■□□□□ 0.99
COMMD4-208ENST00000563220 TIAM2Q8IVF5 1701 aa21.26■□□□□ 0.99
COMMD4-208ENST00000563220 PSDA5PKW4 1024 aaPredicted RBP21.26■□□□□ 0.99
COMMD4-208ENST00000563220 SH2B2O14492 632 aaPredicted RBP21.26■□□□□ 0.99
COMMD4-208ENST00000563220 USP5P45974 858 aa21.26■□□□□ 0.99
COMMD4-208ENST00000563220 CCT2P78371 535 aaKnown RBP21.26■□□□□ 0.99
COMMD4-208ENST00000563220 SBK1Q52WX2 424 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms