RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 SPDYE3A6NKU9 549 aa9.09□□□□□ -0.95
LINC00557-201ENST00000563184 EIF4EBP3O60516 100 aaPredicted RBP9.09□□□□□ -0.95
LINC00557-201ENST00000563184 WISP1O95388 367 aa9.09□□□□□ -0.95
LINC00557-201ENST00000563184 ZC3H6P61129 1189 aaKnown RBP9.09□□□□□ -0.95
LINC00557-201ENST00000563184 PTPN11Q06124 597 aaPredicted RBP9.09□□□□□ -0.95
LINC00557-201ENST00000563184 TRIM28Q13263 835 aaKnown RBP9.09□□□□□ -0.95
LINC00557-201ENST00000563184 SEPT6Q14141 434 aa9.09□□□□□ -0.95
LINC00557-201ENST00000563184 LRRC14Q15048 493 aa9.09□□□□□ -0.95
LINC00557-201ENST00000563184 TRIM42Q8IWZ5 723 aa9.09□□□□□ -0.95
LINC00557-201ENST00000563184 TINF2Q9BSI4 451 aa9.09□□□□□ -0.95
LINC00557-201ENST00000563184 USP26Q9BXU7 913 aa9.09□□□□□ -0.95
LINC00557-201ENST00000563184 ZC3H12CQ9C0D7 883 aaKnown RBP9.09□□□□□ -0.95
LINC00557-201ENST00000563184 CCDC86Q9H6F5 360 aaKnown RBP9.09□□□□□ -0.95
LINC00557-201ENST00000563184 MSTNO14793 375 aa9.08□□□□□ -0.96
LINC00557-201ENST00000563184 GREM1O60565 184 aa9.08□□□□□ -0.96
LINC00557-201ENST00000563184 ELNP15502 786 aa9.08□□□□□ -0.96
LINC00557-201ENST00000563184 ZNF296Q8WUU4 475 aaPredicted RBP9.08□□□□□ -0.96
LINC00557-201ENST00000563184 KCNB2Q92953 911 aa9.08□□□□□ -0.96
LINC00557-201ENST00000563184 CORO1BQ9BR76 489 aa9.08□□□□□ -0.96
LINC00557-201ENST00000563184 KRBA1A5PL33 1030 aa9.07□□□□□ -0.96
LINC00557-201ENST00000563184 ZNF862O60290 1169 aa9.07□□□□□ -0.96
LINC00557-201ENST00000563184 TRIM37O94972 964 aa9.07□□□□□ -0.96
LINC00557-201ENST00000563184 ITGB2P05107 769 aa9.07□□□□□ -0.96
LINC00557-201ENST00000563184 SELPP16109 830 aa9.07□□□□□ -0.96
LINC00557-201ENST00000563184 PAK2Q13177 524 aa9.07□□□□□ -0.96
LINC00557-201ENST00000563184 NAALADL2Q58DX5 795 aa9.07□□□□□ -0.96
LINC00557-201ENST00000563184 MAP1SQ66K74 1059 aaPredicted RBP9.07□□□□□ -0.96
LINC00557-201ENST00000563184 BNC2Q6ZN30 1099 aaPredicted RBP9.07□□□□□ -0.96
LINC00557-201ENST00000563184 GPBAR1Q8TDU6 330 aa9.07□□□□□ -0.96
LINC00557-201ENST00000563184 SPON2Q9BUD6 331 aa9.07□□□□□ -0.96
LINC00557-201ENST00000563184 KRT82Q9NSB4 513 aa9.07□□□□□ -0.96
LINC00557-201ENST00000563184 F13A1P00488 732 aa9.06□□□□□ -0.96
LINC00557-201ENST00000563184 GRIK4Q16099 956 aa9.06□□□□□ -0.96
LINC00557-201ENST00000563184 SCARA3Q6AZY7 606 aa9.06□□□□□ -0.96
LINC00557-201ENST00000563184 SHISA2Q6UWI4 295 aa9.06□□□□□ -0.96
LINC00557-201ENST00000563184 KIAA1211Q6ZU35 1233 aa9.06□□□□□ -0.96
LINC00557-201ENST00000563184 CCDC84Q86UT8 332 aaPredicted RBP9.06□□□□□ -0.96
LINC00557-201ENST00000563184 KIAA0825Q8IV33 1275 aa9.06□□□□□ -0.96
LINC00557-201ENST00000563184 GOLM1Q8NBJ4 401 aa9.06□□□□□ -0.96
LINC00557-201ENST00000563184 DCAF11Q8TEB1 546 aa9.06□□□□□ -0.96
LINC00557-201ENST00000563184 EAF1Q96JC9 268 aaPredicted RBP9.06□□□□□ -0.96
LINC00557-201ENST00000563184 SPOCK3Q9BQ16 436 aa9.06□□□□□ -0.96
LINC00557-201ENST00000563184 MIR1-1HGQ9H1L0 117 aa9.06□□□□□ -0.96
LINC00557-201ENST00000563184 FAM221AA4D161 298 aa9.05□□□□□ -0.96
LINC00557-201ENST00000563184 PROCP04070 461 aa9.05□□□□□ -0.96
LINC00557-201ENST00000563184 LIG1P18858 919 aa9.05□□□□□ -0.96
LINC00557-201ENST00000563184 GJA8P48165 433 aa9.05□□□□□ -0.96
LINC00557-201ENST00000563184 DUOXA2Q1HG44 320 aa9.05□□□□□ -0.96
LINC00557-201ENST00000563184 PRRT3Q5FWE3 981 aa9.05□□□□□ -0.96
LINC00557-201ENST00000563184 SNAP47Q5SQN1 464 aa9.05□□□□□ -0.96
LINC00557-201ENST00000563184 IGF2-ASQ6U949 168 aa9.05□□□□□ -0.96
LINC00557-201ENST00000563184 WDR89Q96FK6 387 aaPredicted RBP9.05□□□□□ -0.96
LINC00557-201ENST00000563184 CAPN10Q9HC96 672 aa9.05□□□□□ -0.96
LINC00557-201ENST00000563184 SUPT16HQ9Y5B9 1047 aaKnown RBP9.05□□□□□ -0.96
LINC00557-201ENST00000563184 PDE3AQ14432 1141 aa9.04□□□□□ -0.96
LINC00557-201ENST00000563184 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.04□□□□□ -0.96
LINC00557-201ENST00000563184 FBXO27Q8NI29 283 aa9.04□□□□□ -0.96
LINC00557-201ENST00000563184 NT5C1AQ9BXI3 368 aa9.04□□□□□ -0.96
LINC00557-201ENST00000563184 UBP1Q9NZI7 540 aa9.04□□□□□ -0.96
LINC00557-201ENST00000563184 INPP5FQ9Y2H2 1132 aa9.04□□□□□ -0.96
LINC00557-201ENST00000563184 SPATA31C1P0DKV0 1188 aa9.03□□□□□ -0.96
LINC00557-201ENST00000563184 LMNB1P20700 586 aa9.03□□□□□ -0.96
LINC00557-201ENST00000563184 CRKP46108 304 aa9.03□□□□□ -0.96
LINC00557-201ENST00000563184 CDK8P49336 464 aa9.03□□□□□ -0.96
LINC00557-201ENST00000563184 KIF4BQ2VIQ3 1234 aa9.03□□□□□ -0.96
LINC00557-201ENST00000563184 FAM196AQ6ZSG2 479 aa9.03□□□□□ -0.96
LINC00557-201ENST00000563184 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.03□□□□□ -0.96
LINC00557-201ENST00000563184 GATAD2BQ8WXI9 593 aa9.03□□□□□ -0.96
LINC00557-201ENST00000563184 JARID2Q92833 1246 aaPredicted RBP9.03□□□□□ -0.96
LINC00557-201ENST00000563184 WDR18Q9BV38 432 aa9.03□□□□□ -0.96
LINC00557-201ENST00000563184 TMPRSS13Q9BYE2 586 aa9.03□□□□□ -0.96
LINC00557-201ENST00000563184 MRPL18Q9H0U6 180 aaKnown RBP9.03□□□□□ -0.96
LINC00557-201ENST00000563184 PCDHGC5Q9Y5F6 944 aa9.03□□□□□ -0.96
LINC00557-201ENST00000563184 CILPO75339 1184 aa9.02□□□□□ -0.97
LINC00557-201ENST00000563184 ACAD11Q709F0 780 aa9.02□□□□□ -0.97
LINC00557-201ENST00000563184 RASGRP4Q8TDF6 673 aa9.02□□□□□ -0.97
LINC00557-201ENST00000563184 GPRASP2Q96D09 838 aa9.02□□□□□ -0.97
LINC00557-201ENST00000563184 RUSC1Q9BVN2 902 aa9.02□□□□□ -0.97
LINC00557-201ENST00000563184 MEGF11A6BM72 1044 aa9.01□□□□□ -0.97
LINC00557-201ENST00000563184 AOC2O75106 756 aa9.01□□□□□ -0.97
LINC00557-201ENST00000563184 EXOSC6Q5RKV6 272 aaKnown RBP9.01□□□□□ -0.97
LINC00557-201ENST00000563184 AGGF1Q8N302 714 aaeCLIP9.01□□□□□ -0.97
LINC00557-201ENST00000563184 SLC43A3Q8NBI5 491 aa9.01□□□□□ -0.97
LINC00557-201ENST00000563184 ACSBG1Q96GR2 724 aa9.01□□□□□ -0.97
LINC00557-201ENST00000563184 LRRC3Q9BY71 257 aa9.01□□□□□ -0.97
LINC00557-201ENST00000563184 F8W735 103 aaPredicted RBP9□□□□□ -0.97
LINC00557-201ENST00000563184 TLR3O15455 904 aaKnown RBP9□□□□□ -0.97
LINC00557-201ENST00000563184 INPP5AQ14642 412 aa9□□□□□ -0.97
LINC00557-201ENST00000563184 TMEM130Q8N3G9 435 aa9□□□□□ -0.97
LINC00557-201ENST00000563184 LENG1Q96BZ8 264 aaPredicted RBP9□□□□□ -0.97
LINC00557-201ENST00000563184 PCDHA4Q9UN74 947 aa9□□□□□ -0.97
LINC00557-201ENST00000563184 ALX3O95076 343 aa8.99□□□□□ -0.97
LINC00557-201ENST00000563184 MPP2Q14168 576 aa8.99□□□□□ -0.97
LINC00557-201ENST00000563184 HP1BP3Q5SSJ5 553 aaPredicted RBP8.99□□□□□ -0.97
LINC00557-201ENST00000563184 LRFN4Q6PJG9 635 aa8.99□□□□□ -0.97
LINC00557-201ENST00000563184 SLITRK4Q8IW52 837 aa8.99□□□□□ -0.97
LINC00557-201ENST00000563184 RNF208Q9H0X6 261 aa8.99□□□□□ -0.97
LINC00557-201ENST00000563184 SUGCTQ9HAC7 445 aa8.99□□□□□ -0.97
LINC00557-201ENST00000563184 PPP1R9AQ9ULJ8 1098 aa8.99□□□□□ -0.97
LINC00557-201ENST00000563184 SYNGAP1Q96PV0 1343 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms