RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 PDE4AP27815 886 aa19.81■□□□□ 0.76
USB1-206ENST00000562534 PPP4CP60510 307 aa19.81■□□□□ 0.76
USB1-206ENST00000562534 TNFAIP1Q13829 316 aa19.81■□□□□ 0.76
USB1-206ENST00000562534 FKBP1CQ5VVH2 108 aa19.81■□□□□ 0.76
USB1-206ENST00000562534 USP48Q86UV5 1035 aa19.81■□□□□ 0.76
USB1-206ENST00000562534 TICAM2Q86XR7 235 aa19.81■□□□□ 0.76
USB1-206ENST00000562534 CERS3Q8IU89 383 aa19.81■□□□□ 0.76
USB1-206ENST00000562534 EVI5LQ96CN4 794 aa19.81■□□□□ 0.76
USB1-206ENST00000562534 CLRN2A0PK11 232 aa19.8■□□□□ 0.76
USB1-206ENST00000562534 PLCG2P16885 1265 aa19.8■□□□□ 0.76
USB1-206ENST00000562534 BTDP43251 543 aa19.8■□□□□ 0.76
USB1-206ENST00000562534 TNNI2P48788 182 aa19.8■□□□□ 0.76
USB1-206ENST00000562534 CDC42EP5Q6NZY7 148 aa19.8■□□□□ 0.76
USB1-206ENST00000562534 ZFYP08048 801 aaPredicted RBP19.79■□□□□ 0.76
USB1-206ENST00000562534 PDE6AP16499 860 aa19.79■□□□□ 0.76
USB1-206ENST00000562534 UBE3CQ15386 1083 aa19.79■□□□□ 0.76
USB1-206ENST00000562534 GLIS2Q9BZE0 524 aaPredicted RBP19.79■□□□□ 0.76
USB1-206ENST00000562534 VEZTQ9HBM0 779 aa19.79■□□□□ 0.76
USB1-206ENST00000562534 ADAMTSL1Q8N6G6 1762 aa19.78■□□□□ 0.76
USB1-206ENST00000562534 TRIM6-TRIM34B2RNG4 842 aa19.78■□□□□ 0.76
USB1-206ENST00000562534 ADD2P35612 726 aa19.78■□□□□ 0.76
USB1-206ENST00000562534 DEFB129Q9H1M3 183 aa19.78■□□□□ 0.76
USB1-206ENST00000562534 PPP2R3BQ9Y5P8 575 aa19.78■□□□□ 0.76
USB1-206ENST00000562534 ZNF532Q9HCE3 1301 aa19.77■□□□□ 0.76
USB1-206ENST00000562534 C1QTNF8P60827 252 aa19.77■□□□□ 0.76
USB1-206ENST00000562534 FAM83AQ86UY5 434 aa19.77■□□□□ 0.76
USB1-206ENST00000562534 FSD1Q9BTV5 496 aa19.77■□□□□ 0.76
USB1-206ENST00000562534 TCRBV5S4A2TA0A5A2 114 aa19.76■□□□□ 0.75
USB1-206ENST00000562534 TCP10L2B9ZVM9 353 aa19.76■□□□□ 0.75
USB1-206ENST00000562534 RNF113AO15541 343 aaKnown RBP19.76■□□□□ 0.75
USB1-206ENST00000562534 ADGRA1Q86SQ6 560 aa19.76■□□□□ 0.75
USB1-206ENST00000562534 RILPL2Q969X0 211 aa19.76■□□□□ 0.75
USB1-206ENST00000562534 IDI2Q9BXS1 227 aa19.76■□□□□ 0.75
USB1-206ENST00000562534 AATFQ9NY61 560 aaKnown RBP eCLIP19.76■□□□□ 0.75
USB1-206ENST00000562534 MYH2Q9UKX2 1941 aa19.76■□□□□ 0.75
USB1-206ENST00000562534 MAGEB6P1A0A0J9YX57 407 aa19.75■□□□□ 0.75
USB1-206ENST00000562534 NPM3O75607 178 aaKnown RBP19.75■□□□□ 0.75
USB1-206ENST00000562534 RHBDL3P58872 404 aa19.75■□□□□ 0.75
USB1-206ENST00000562534 RASA3Q14644 834 aa19.75■□□□□ 0.75
USB1-206ENST00000562534 PASKQ96RG2 1323 aa19.75■□□□□ 0.75
USB1-206ENST00000562534 ADM5C9JUS6 153 aa19.74■□□□□ 0.75
USB1-206ENST00000562534 ENTPD3O75355 529 aa19.74■□□□□ 0.75
USB1-206ENST00000562534 SUPT20HL1Q3ZLR7 823 aa19.74■□□□□ 0.75
USB1-206ENST00000562534 TTC22Q5TAA0 569 aa19.74■□□□□ 0.75
USB1-206ENST00000562534 MIGA1Q8NAN2 632 aa19.74■□□□□ 0.75
USB1-206ENST00000562534 FAM151AQ8WW52 585 aa19.74■□□□□ 0.75
USB1-206ENST00000562534 SCAF8Q9UPN6 1271 aaKnown RBP19.74■□□□□ 0.75
USB1-206ENST00000562534 POLR2AP24928 1970 aaKnown RBP19.74■□□□□ 0.75
USB1-206ENST00000562534 TRAF5O00463 557 aa19.73■□□□□ 0.75
USB1-206ENST00000562534 NF2P35240 595 aa19.73■□□□□ 0.75
USB1-206ENST00000562534 CACNB3P54284 484 aa19.73■□□□□ 0.75
USB1-206ENST00000562534 TEX11Q8IYF3 940 aa19.73■□□□□ 0.75
USB1-206ENST00000562534 SH3RF3Q8TEJ3 882 aaPredicted RBP19.73■□□□□ 0.75
USB1-206ENST00000562534 WDHD1O75717 1129 aaPredicted RBP19.72■□□□□ 0.75
USB1-206ENST00000562534 DYNLL1P63167 89 aaKnown RBP19.72■□□□□ 0.75
USB1-206ENST00000562534 APPBP2Q92624 585 aa19.72■□□□□ 0.75
USB1-206ENST00000562534 HOOK2Q96ED9 719 aa19.72■□□□□ 0.75
USB1-206ENST00000562534 CDCA5Q96FF9 252 aa19.72■□□□□ 0.75
USB1-206ENST00000562534 MYO5AQ9Y4I1 1855 aaKnown RBP19.71■□□□□ 0.75
USB1-206ENST00000562534 RGS3P49796 1198 aa19.71■□□□□ 0.75
USB1-206ENST00000562534 APLP1P51693 650 aa19.71■□□□□ 0.75
USB1-206ENST00000562534 TCP10Q12799 353 aa19.71■□□□□ 0.75
USB1-206ENST00000562534 NFIAQ12857 509 aa19.71■□□□□ 0.75
USB1-206ENST00000562534 PRAMEF18Q5VWM3 479 aa19.71■□□□□ 0.75
USB1-206ENST00000562534 AIDAQ96BJ3 306 aa19.71■□□□□ 0.75
USB1-206ENST00000562534 RIOK1Q9BRS2 568 aaKnown RBP19.71■□□□□ 0.75
USB1-206ENST00000562534 FAM198AQ9UFP1 575 aa19.71■□□□□ 0.75
USB1-206ENST00000562534 DOCK2Q92608 1830 aa19.71■□□□□ 0.75
USB1-206ENST00000562534 HIP1O00291 1037 aa19.7■□□□□ 0.74
USB1-206ENST00000562534 CELF2O95319 508 aaKnown RBP19.7■□□□□ 0.74
USB1-206ENST00000562534 SLFNL1Q499Z3 407 aa19.7■□□□□ 0.74
USB1-206ENST00000562534 CST9Q5W186 159 aa19.7■□□□□ 0.74
USB1-206ENST00000562534 DLK2Q6UY11 383 aa19.7■□□□□ 0.74
USB1-206ENST00000562534 TGFBRAP1Q8WUH2 860 aa19.7■□□□□ 0.74
USB1-206ENST00000562534 CRNKL1Q9BZJ0 848 aaKnown RBP19.7■□□□□ 0.74
USB1-206ENST00000562534 TMEM39BQ9GZU3 492 aa19.7■□□□□ 0.74
USB1-206ENST00000562534 PUS7LQ9H0K6 701 aaKnown RBP19.7■□□□□ 0.74
USB1-206ENST00000562534 CNTNAP1P78357 1384 aa19.7■□□□□ 0.74
USB1-206ENST00000562534 TMEM88BA6NKF7 163 aa19.69■□□□□ 0.74
USB1-206ENST00000562534 SDSP20132 328 aa19.69■□□□□ 0.74
USB1-206ENST00000562534 USP5P45974 858 aa19.69■□□□□ 0.74
USB1-206ENST00000562534 FMR1Q06787 632 aaKnown RBP eCLIP19.69■□□□□ 0.74
USB1-206ENST00000562534 PICALMQ13492 652 aa19.69■□□□□ 0.74
USB1-206ENST00000562534 ZMYM1Q5SVZ6 1142 aa19.69■□□□□ 0.74
USB1-206ENST00000562534 C2orf69Q8N8R5 385 aa19.69■□□□□ 0.74
USB1-206ENST00000562534 OSBP2Q969R2 916 aa19.69■□□□□ 0.74
USB1-206ENST00000562534 TEPSINQ96N21 525 aa19.69■□□□□ 0.74
USB1-206ENST00000562534 ZNF408Q9H9D4 720 aa19.69■□□□□ 0.74
USB1-206ENST00000562534 ECM29Q5VYK3 1845 aa19.69■□□□□ 0.74
USB1-206ENST00000562534 MBD4O95243 580 aa19.68■□□□□ 0.74
USB1-206ENST00000562534 CHGBP05060 677 aa19.68■□□□□ 0.74
USB1-206ENST00000562534 GSPT1P15170 499 aaKnown RBP19.68■□□□□ 0.74
USB1-206ENST00000562534 FKBP1BP68106 108 aa19.68■□□□□ 0.74
USB1-206ENST00000562534 NBPF12Q5TAG4 269 aaPredicted RBP19.68■□□□□ 0.74
USB1-206ENST00000562534 ZSCAN29Q8IWY8 852 aaPredicted RBP19.68■□□□□ 0.74
USB1-206ENST00000562534 DHX36Q9H2U1 1008 aaKnown RBP19.68■□□□□ 0.74
USB1-206ENST00000562534 ARMT1Q9H993 441 aa19.68■□□□□ 0.74
USB1-206ENST00000562534 DDX4Q9NQI0 724 aaKnown RBP19.68■□□□□ 0.74
USB1-206ENST00000562534 HELLSQ9NRZ9 838 aa19.68■□□□□ 0.74
USB1-206ENST00000562534 MAST2Q6P0Q8 1798 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms