RNA–Protein interactions for RNA: ENST00000561081.5

LRRC49-227, Transcript of leucine rich repeat containing 49, humanhuman

TSL 2

Gene LRRC49, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-227ENST00000561081 FBXO18Q8NFZ0 1043 aa12.42□□□□□ -0.42
LRRC49-227ENST00000561081 C8orf76Q96K31 380 aa12.42□□□□□ -0.42
LRRC49-227ENST00000561081 ZNF396Q96N95 335 aaPredicted RBP12.42□□□□□ -0.42
LRRC49-227ENST00000561081 DDX19AQ9NUU7 478 aaKnown RBP12.42□□□□□ -0.42
LRRC49-227ENST00000561081 ABCF2Q9UG63 623 aa12.42□□□□□ -0.42
LRRC49-227ENST00000561081 CACNA1SQ13698 1873 aa12.42□□□□□ -0.42
LRRC49-227ENST00000561081 ONECUT3O60422 494 aaPredicted RBP12.41□□□□□ -0.42
LRRC49-227ENST00000561081 METAP2P50579 478 aaKnown RBP eCLIP12.41□□□□□ -0.42
LRRC49-227ENST00000561081 CEBPZQ03701 1054 aaKnown RBP12.41□□□□□ -0.42
LRRC49-227ENST00000561081 MAP3K11Q16584 847 aa12.41□□□□□ -0.42
LRRC49-227ENST00000561081 MEX3CQ5U5Q3 659 aaKnown RBP12.41□□□□□ -0.42
LRRC49-227ENST00000561081 FBXO33Q7Z6M2 555 aa12.41□□□□□ -0.42
LRRC49-227ENST00000561081 STAG1Q8WVM7 1258 aa12.41□□□□□ -0.42
LRRC49-227ENST00000561081 USP28Q96RU2 1077 aa12.41□□□□□ -0.42
LRRC49-227ENST00000561081 KRT23Q9C075 422 aa12.41□□□□□ -0.42
LRRC49-227ENST00000561081 FTOQ9C0B1 505 aaKnown RBP eCLIP12.41□□□□□ -0.42
LRRC49-227ENST00000561081 RAI14Q9P0K7 980 aa12.41□□□□□ -0.42
LRRC49-227ENST00000561081 ZSWIM5Q9P217 1185 aa12.41□□□□□ -0.42
LRRC49-227ENST00000561081 LIFRP42702 1097 aa12.41□□□□□ -0.42
LRRC49-227ENST00000561081 CAMK4Q16566 473 aa12.41□□□□□ -0.42
LRRC49-227ENST00000561081 MFSD6Q6ZSS7 791 aa12.41□□□□□ -0.42
LRRC49-227ENST00000561081 RGS22Q8NE09 1264 aa12.41□□□□□ -0.42
LRRC49-227ENST00000561081 BICD2Q8TD16 824 aa12.41□□□□□ -0.42
LRRC49-227ENST00000561081 KDM4AO75164 1064 aa12.41□□□□□ -0.42
LRRC49-227ENST00000561081 NR1I2O75469 434 aa12.41□□□□□ -0.42
LRRC49-227ENST00000561081 TM4SF1P30408 202 aa12.41□□□□□ -0.42
LRRC49-227ENST00000561081 TMEM67Q5HYA8 995 aa12.41□□□□□ -0.42
LRRC49-227ENST00000561081 OTUD7BQ6GQQ9 843 aa12.41□□□□□ -0.42
LRRC49-227ENST00000561081 CCDC24Q8N4L8 307 aa12.41□□□□□ -0.42
LRRC49-227ENST00000561081 CLSTN2Q9H4D0 955 aa12.41□□□□□ -0.42
LRRC49-227ENST00000561081 MAGEB6P1A0A0J9YX57 407 aa12.4□□□□□ -0.42
LRRC49-227ENST00000561081 SEMA3EO15041 775 aa12.4□□□□□ -0.42
LRRC49-227ENST00000561081 CCDC192P0DO97 292 aa12.4□□□□□ -0.42
LRRC49-227ENST00000561081 KLRK1P26718 216 aa12.4□□□□□ -0.42
LRRC49-227ENST00000561081 RBM43Q6ZSC3 357 aaKnown RBP12.4□□□□□ -0.42
LRRC49-227ENST00000561081 ANKRD2Q9GZV1 360 aa12.4□□□□□ -0.42
LRRC49-227ENST00000561081 TNMDQ9H2S6 317 aa12.4□□□□□ -0.42
LRRC49-227ENST00000561081 TNRC6CQ9HCJ0 1690 aaKnown RBP12.4□□□□□ -0.42
LRRC49-227ENST00000561081 AFF2P51816 1311 aa12.4□□□□□ -0.42
LRRC49-227ENST00000561081 ZBTB43O43298 467 aa12.4□□□□□ -0.42
LRRC49-227ENST00000561081 CDKL5O76039 1030 aa12.4□□□□□ -0.42
LRRC49-227ENST00000561081 TRAPPC3LQ5T215 181 aa12.4□□□□□ -0.42
LRRC49-227ENST00000561081 ZSCAN30Q86W11 494 aa12.4□□□□□ -0.42
LRRC49-227ENST00000561081 RIOK1Q9BRS2 568 aaKnown RBP12.4□□□□□ -0.42
LRRC49-227ENST00000561081 CDC27P30260 824 aa12.39□□□□□ -0.43
LRRC49-227ENST00000561081 RFC4P35249 363 aa12.39□□□□□ -0.43
LRRC49-227ENST00000561081 NFXL1Q6ZNB6 911 aa12.39□□□□□ -0.43
LRRC49-227ENST00000561081 PDS5AQ29RF7 1337 aaKnown RBP12.39□□□□□ -0.43
LRRC49-227ENST00000561081 IFIT3O14879 490 aaKnown RBP12.39□□□□□ -0.43
LRRC49-227ENST00000561081 RXRAP19793 462 aa12.39□□□□□ -0.43
LRRC49-227ENST00000561081 MICU3Q86XE3 530 aa12.39□□□□□ -0.43
LRRC49-227ENST00000561081 ZNF384Q8TF68 577 aa12.39□□□□□ -0.43
LRRC49-227ENST00000561081 RTEL1Q9NZ71 1219 aa12.39□□□□□ -0.43
LRRC49-227ENST00000561081 PPARAQ07869 468 aa12.39□□□□□ -0.43
LRRC49-227ENST00000561081 NTRK3Q16288 839 aa12.39□□□□□ -0.43
LRRC49-227ENST00000561081 BRAPQ7Z569 592 aa12.39□□□□□ -0.43
LRRC49-227ENST00000561081 SEPT12Q8IYM1 358 aa12.39□□□□□ -0.43
LRRC49-227ENST00000561081 SDR42E1Q8WUS8 393 aa12.39□□□□□ -0.43
LRRC49-227ENST00000561081 GJB4Q9NTQ9 266 aa12.39□□□□□ -0.43
LRRC49-227ENST00000561081 FAM217BQ9NTX9 383 aaPredicted RBP12.39□□□□□ -0.43
LRRC49-227ENST00000561081 ANAPC4Q9UJX5 808 aa12.39□□□□□ -0.43
LRRC49-227ENST00000561081 FAM196AQ6ZSG2 479 aa12.38□□□□□ -0.43
LRRC49-227ENST00000561081 RNF41Q9H4P4 317 aaPredicted RBP12.38□□□□□ -0.43
LRRC49-227ENST00000561081 SLC12A7Q9Y666 1083 aa12.38□□□□□ -0.43
LRRC49-227ENST00000561081 NID2Q14112 1375 aa12.38□□□□□ -0.43
LRRC49-227ENST00000561081 MYH13Q9UKX3 1938 aa12.38□□□□□ -0.43
LRRC49-227ENST00000561081 ECM29Q5VYK3 1845 aa12.38□□□□□ -0.43
LRRC49-227ENST00000561081 GOLGA8AA7E2F4 631 aa12.38□□□□□ -0.43
LRRC49-227ENST00000561081 HIBADHP31937 336 aaKnown RBP12.38□□□□□ -0.43
LRRC49-227ENST00000561081 TYRO3Q06418 890 aa12.38□□□□□ -0.43
LRRC49-227ENST00000561081 RRP12Q5JTH9 1297 aaKnown RBP12.38□□□□□ -0.43
LRRC49-227ENST00000561081 CPLX2Q6PUV4 134 aaKnown RBP12.38□□□□□ -0.43
LRRC49-227ENST00000561081 CCAR1Q8IX12 1150 aaKnown RBP12.38□□□□□ -0.43
LRRC49-227ENST00000561081 CCDC144CPQ8IYA2 1237 aa12.38□□□□□ -0.43
LRRC49-227ENST00000561081 CKAP2LQ8IYA6 745 aa12.38□□□□□ -0.43
LRRC49-227ENST00000561081 MTA3Q9BTC8 594 aa12.38□□□□□ -0.43
LRRC49-227ENST00000561081 MYL10Q9BUA6 226 aa12.38□□□□□ -0.43
LRRC49-227ENST00000561081 BCL11BQ9C0K0 894 aaPredicted RBP12.38□□□□□ -0.43
LRRC49-227ENST00000561081 LRRC4BQ9NT99 713 aa12.38□□□□□ -0.43
LRRC49-227ENST00000561081 MRVI1Q9Y6F6 885 aa12.38□□□□□ -0.43
LRRC49-227ENST00000561081 CCDC69A6NI79 296 aa12.37□□□□□ -0.43
LRRC49-227ENST00000561081 TFCP2L1Q9NZI6 479 aa12.37□□□□□ -0.43
LRRC49-227ENST00000561081 USP25Q9UHP3 1055 aa12.37□□□□□ -0.43
LRRC49-227ENST00000561081 TRPC5Q9UL62 973 aaPredicted RBP12.37□□□□□ -0.43
LRRC49-227ENST00000561081 NOL7Q9UMY1 257 aaKnown RBP12.37□□□□□ -0.43
LRRC49-227ENST00000561081 KIF28PB7ZC32 967 aa12.37□□□□□ -0.43
LRRC49-227ENST00000561081 POLR3DP05423 398 aaPredicted RBP12.37□□□□□ -0.43
LRRC49-227ENST00000561081 DYNLL1P63167 89 aaKnown RBP12.37□□□□□ -0.43
LRRC49-227ENST00000561081 KIF23Q02241 960 aaPredicted RBP12.37□□□□□ -0.43
LRRC49-227ENST00000561081 NFIXQ14938 502 aa12.37□□□□□ -0.43
LRRC49-227ENST00000561081 PHKBQ93100 1093 aa12.37□□□□□ -0.43
LRRC49-227ENST00000561081 ALG1Q9BT22 464 aa12.37□□□□□ -0.43
LRRC49-227ENST00000561081 GOLPH3LQ9H4A5 285 aa12.37□□□□□ -0.43
LRRC49-227ENST00000561081 CCDC39Q9UFE4 941 aa12.37□□□□□ -0.43
LRRC49-227ENST00000561081 IRS2Q9Y4H2 1338 aa12.36□□□□□ -0.43
LRRC49-227ENST00000561081 RANBP6O60518 1105 aaKnown RBP12.36□□□□□ -0.43
LRRC49-227ENST00000561081 HSPA1LP34931 641 aa12.36□□□□□ -0.43
LRRC49-227ENST00000561081 SNW1Q13573 536 aaKnown RBP12.36□□□□□ -0.43
LRRC49-227ENST00000561081 SART3Q15020 963 aaKnown RBP12.36□□□□□ -0.43
LRRC49-227ENST00000561081 NSUN4Q96CB9 384 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms