RNA–Protein interactions for RNA: ENST00000560047.1

CRTC3-207, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-207ENST00000560047 ATP7AQ04656 1500 aa10.8□□□□□ -0.68
CRTC3-207ENST00000560047 ZFYVE16Q7Z3T8 1539 aa10.8□□□□□ -0.68
CRTC3-207ENST00000560047 DEAF1O75398 565 aaPredicted RBP10.8□□□□□ -0.68
CRTC3-207ENST00000560047 P4HBP07237 508 aaKnown RBP10.8□□□□□ -0.68
CRTC3-207ENST00000560047 ALG1LQ6GMV1 187 aa10.8□□□□□ -0.68
CRTC3-207ENST00000560047 FBF1Q8TES7 1133 aa10.8□□□□□ -0.68
CRTC3-207ENST00000560047 PPP4R2Q9NY27 417 aa10.8□□□□□ -0.68
CRTC3-207ENST00000560047 TRAK1Q9UPV9 953 aa10.8□□□□□ -0.68
CRTC3-207ENST00000560047 MAGI2Q86UL8 1455 aa10.8□□□□□ -0.68
CRTC3-207ENST00000560047 SHANK2Q9UPX8 1470 aa10.8□□□□□ -0.68
CRTC3-207ENST00000560047 HECW2Q9P2P5 1572 aa10.79□□□□□ -0.68
CRTC3-207ENST00000560047 MAST1Q9Y2H9 1570 aa10.79□□□□□ -0.68
CRTC3-207ENST00000560047 H3BRJ5 948 aa10.79□□□□□ -0.68
CRTC3-207ENST00000560047 ERCC3P19447 782 aa10.79□□□□□ -0.68
CRTC3-207ENST00000560047 ATP10AO60312 1499 aa10.79□□□□□ -0.68
CRTC3-207ENST00000560047 ROCK1Q13464 1354 aa10.78□□□□□ -0.68
CRTC3-207ENST00000560047 INO80Q9ULG1 1556 aaPredicted RBP10.78□□□□□ -0.68
CRTC3-207ENST00000560047 A0A096LPE4 126 aa10.78□□□□□ -0.68
CRTC3-207ENST00000560047 A0A1W2PPZ6 126 aa10.78□□□□□ -0.68
CRTC3-207ENST00000560047 C9orf172C9J069 976 aa10.78□□□□□ -0.68
CRTC3-207ENST00000560047 FSCN2O14926 492 aa10.78□□□□□ -0.68
CRTC3-207ENST00000560047 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.78□□□□□ -0.68
CRTC3-207ENST00000560047 TMCO4Q5TGY1 634 aa10.78□□□□□ -0.68
CRTC3-207ENST00000560047 TXNDC11Q6PKC3 985 aa10.78□□□□□ -0.68
CRTC3-207ENST00000560047 IGF2-ASQ6U949 168 aa10.78□□□□□ -0.68
CRTC3-207ENST00000560047 WNT8BQ93098 351 aa10.78□□□□□ -0.68
CRTC3-207ENST00000560047 PCGF6Q9BYE7 350 aa10.78□□□□□ -0.68
CRTC3-207ENST00000560047 ADGRL2O95490 1459 aa10.78□□□□□ -0.68
CRTC3-207ENST00000560047 CROCC2H7BZ55 1655 aa10.78□□□□□ -0.68
CRTC3-207ENST00000560047 DHX29Q7Z478 1369 aaKnown RBP10.77□□□□□ -0.68
CRTC3-207ENST00000560047 KIF15Q9NS87 1388 aa10.77□□□□□ -0.68
CRTC3-207ENST00000560047 ABCA6Q8N139 1617 aa10.77□□□□□ -0.68
CRTC3-207ENST00000560047 METTL12A8MUP2 240 aa10.77□□□□□ -0.69
CRTC3-207ENST00000560047 DLL1O00548 723 aa10.77□□□□□ -0.69
CRTC3-207ENST00000560047 LDHBP07195 334 aaKnown RBP10.77□□□□□ -0.69
CRTC3-207ENST00000560047 GRIA4P48058 902 aa10.77□□□□□ -0.69
CRTC3-207ENST00000560047 PIP4K2BP78356 416 aa10.77□□□□□ -0.69
CRTC3-207ENST00000560047 FGD1P98174 961 aa10.77□□□□□ -0.69
CRTC3-207ENST00000560047 VN1R5Q7Z5H4 357 aa10.77□□□□□ -0.69
CRTC3-207ENST00000560047 KLHL23Q8NBE8 558 aa10.77□□□□□ -0.69
CRTC3-207ENST00000560047 LENG1Q96BZ8 264 aaPredicted RBP10.77□□□□□ -0.69
CRTC3-207ENST00000560047 WWC3Q9ULE0 1092 aa10.77□□□□□ -0.69
CRTC3-207ENST00000560047 DIP2CQ9Y2E4 1556 aa10.77□□□□□ -0.69
CRTC3-207ENST00000560047 A2MP01023 1474 aa10.76□□□□□ -0.69
CRTC3-207ENST00000560047 ARL4DP49703 201 aa10.76□□□□□ -0.69
CRTC3-207ENST00000560047 NRG1Q02297 640 aaPredicted RBP10.76□□□□□ -0.69
CRTC3-207ENST00000560047 IKBKEQ14164 716 aa10.76□□□□□ -0.69
CRTC3-207ENST00000560047 GRM2Q14416 872 aa10.76□□□□□ -0.69
CRTC3-207ENST00000560047 SPRED3Q2MJR0 410 aa10.76□□□□□ -0.69
CRTC3-207ENST00000560047 PLA2G4EQ3MJ16 856 aa10.76□□□□□ -0.69
CRTC3-207ENST00000560047 EAPPQ56P03 285 aaPredicted RBP10.76□□□□□ -0.69
CRTC3-207ENST00000560047 PRPF40BQ6NWY9 871 aaKnown RBP10.76□□□□□ -0.69
CRTC3-207ENST00000560047 PI16Q6UXB8 463 aa10.76□□□□□ -0.69
CRTC3-207ENST00000560047 CD163Q86VB7 1156 aa10.76□□□□□ -0.69
CRTC3-207ENST00000560047 OSGEPQ9NPF4 335 aa10.76□□□□□ -0.69
CRTC3-207ENST00000560047 SEC31BQ9NQW1 1179 aa10.76□□□□□ -0.69
CRTC3-207ENST00000560047 ARID4BQ4LE39 1312 aaPredicted RBP10.76□□□□□ -0.69
CRTC3-207ENST00000560047 C1QTNF9BB2RNN3 333 aa10.75□□□□□ -0.69
CRTC3-207ENST00000560047 KIF3BO15066 747 aa10.75□□□□□ -0.69
CRTC3-207ENST00000560047 SELPP16109 830 aa10.75□□□□□ -0.69
CRTC3-207ENST00000560047 MLECQ14165 292 aa10.75□□□□□ -0.69
CRTC3-207ENST00000560047 GALNT11Q8NCW6 608 aa10.75□□□□□ -0.69
CRTC3-207ENST00000560047 BCO2Q9BYV7 579 aa10.75□□□□□ -0.69
CRTC3-207ENST00000560047 NAIPQ13075 1403 aa10.75□□□□□ -0.69
CRTC3-207ENST00000560047 ARHGEF40Q8TER5 1519 aa10.74□□□□□ -0.69
CRTC3-207ENST00000560047 TMEM238LA0A1B0GVL6 79 aa10.74□□□□□ -0.69
CRTC3-207ENST00000560047 CD68P34810 354 aaPredicted RBP10.74□□□□□ -0.69
CRTC3-207ENST00000560047 PTPN12Q05209 780 aaKnown RBP10.74□□□□□ -0.69
CRTC3-207ENST00000560047 SHISA2Q6UWI4 295 aa10.74□□□□□ -0.69
CRTC3-207ENST00000560047 NPAS4Q8IUM7 802 aa10.74□□□□□ -0.69
CRTC3-207ENST00000560047 SLC7A3Q8WY07 619 aa10.74□□□□□ -0.69
CRTC3-207ENST00000560047 SETDB2Q96T68 719 aa10.74□□□□□ -0.69
CRTC3-207ENST00000560047 CARD10Q9BWT7 1032 aa10.74□□□□□ -0.69
CRTC3-207ENST00000560047 CLEC4MQ9H2X3 399 aaPredicted RBP10.74□□□□□ -0.69
CRTC3-207ENST00000560047 PLXNC1O60486 1568 aa10.73□□□□□ -0.69
CRTC3-207ENST00000560047 SIGLEC1Q9BZZ2 1709 aa10.73□□□□□ -0.69
CRTC3-207ENST00000560047 SOX1O00570 391 aaPredicted RBP10.73□□□□□ -0.69
CRTC3-207ENST00000560047 GIPC1O14908 333 aa10.73□□□□□ -0.69
CRTC3-207ENST00000560047 ITPKAP23677 461 aa10.73□□□□□ -0.69
CRTC3-207ENST00000560047 CHRNA4P43681 627 aa10.73□□□□□ -0.69
CRTC3-207ENST00000560047 GGT6Q6P531 493 aa10.73□□□□□ -0.69
CRTC3-207ENST00000560047 GLIS3Q8NEA6 775 aa10.73□□□□□ -0.69
CRTC3-207ENST00000560047 KLHDC7BQ96G42 594 aa10.73□□□□□ -0.69
CRTC3-207ENST00000560047 ZFYVE1Q9HBF4 777 aa10.73□□□□□ -0.69
CRTC3-207ENST00000560047 ABCB6Q9NP58 842 aa10.73□□□□□ -0.69
CRTC3-207ENST00000560047 USP21Q9UK80 565 aa10.73□□□□□ -0.69
CRTC3-207ENST00000560047 HFM1A2PYH4 1435 aa10.73□□□□□ -0.69
CRTC3-207ENST00000560047 ANKRD50Q9ULJ7 1429 aa10.73□□□□□ -0.69
CRTC3-207ENST00000560047 DUOX2Q9NRD8 1548 aa10.73□□□□□ -0.69
CRTC3-207ENST00000560047 ADGBQ8N7X0 1667 aa10.73□□□□□ -0.69
CRTC3-207ENST00000560047 EIF4EBP3O60516 100 aaPredicted RBP10.72□□□□□ -0.69
CRTC3-207ENST00000560047 PRPF40AO75400 957 aaKnown RBP10.72□□□□□ -0.69
CRTC3-207ENST00000560047 ESRRAP11474 423 aaPredicted RBP10.72□□□□□ -0.69
CRTC3-207ENST00000560047 C19orf57Q0VDD7 668 aa10.72□□□□□ -0.69
CRTC3-207ENST00000560047 SUZ12Q15022 739 aaKnown RBP10.72□□□□□ -0.69
CRTC3-207ENST00000560047 SPG7Q9UQ90 795 aa10.72□□□□□ -0.69
CRTC3-207ENST00000560047 SETD5Q9C0A6 1442 aa10.72□□□□□ -0.69
CRTC3-207ENST00000560047 PCDH1Q08174 1060 aa10.71□□□□□ -0.69
CRTC3-207ENST00000560047 NXPE4Q6UWF7 544 aa10.71□□□□□ -0.69
CRTC3-207ENST00000560047 FRMD6Q96NE9 622 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms