RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 AP3B2Q13367 1082 aa6.11□□□□□ -1.43
LRRC28-205ENST00000558248 DSC3Q14574 896 aa6.11□□□□□ -1.43
LRRC28-205ENST00000558248 ALG1LQ6GMV1 187 aa6.11□□□□□ -1.43
LRRC28-205ENST00000558248 FAM46AQ96IP4 442 aaKnown RBP6.11□□□□□ -1.43
LRRC28-205ENST00000558248 MYRFLQ96LU7 910 aa6.11□□□□□ -1.43
LRRC28-205ENST00000558248 CEP170Q5SW79 1584 aa6.1□□□□□ -1.43
LRRC28-205ENST00000558248 SCO2A0A1W2PP80 73 aa6.1□□□□□ -1.43
LRRC28-205ENST00000558248 FCGRTP55899 365 aa6.1□□□□□ -1.43
LRRC28-205ENST00000558248 PPP2R3AQ06190 1150 aa6.1□□□□□ -1.43
LRRC28-205ENST00000558248 POU4F3Q15319 338 aa6.1□□□□□ -1.43
LRRC28-205ENST00000558248 ZNF423Q2M1K9 1284 aa6.1□□□□□ -1.43
LRRC28-205ENST00000558248 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.1□□□□□ -1.43
LRRC28-205ENST00000558248 EXOSC6Q5RKV6 272 aaKnown RBP6.1□□□□□ -1.43
LRRC28-205ENST00000558248 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.1□□□□□ -1.43
LRRC28-205ENST00000558248 C12orf50Q8NA57 414 aaPredicted RBP6.1□□□□□ -1.43
LRRC28-205ENST00000558248 SMG8Q8ND04 991 aaKnown RBP6.1□□□□□ -1.43
LRRC28-205ENST00000558248 KCNF1Q9H3M0 494 aa6.1□□□□□ -1.43
LRRC28-205ENST00000558248 SUGCTQ9HAC7 445 aa6.1□□□□□ -1.43
LRRC28-205ENST00000558248 DISP3Q9P2K9 1392 aa6.09□□□□□ -1.43
LRRC28-205ENST00000558248 FSTP19883 344 aa6.09□□□□□ -1.43
LRRC28-205ENST00000558248 MAOBP27338 520 aa6.09□□□□□ -1.43
LRRC28-205ENST00000558248 PREPP48147 710 aa6.09□□□□□ -1.43
LRRC28-205ENST00000558248 FGD1P98174 961 aa6.09□□□□□ -1.43
LRRC28-205ENST00000558248 FMR1Q06787 632 aaKnown RBP eCLIP6.09□□□□□ -1.43
LRRC28-205ENST00000558248 CCDC27Q2M243 656 aa6.09□□□□□ -1.43
LRRC28-205ENST00000558248 SND1Q7KZF4 910 aaKnown RBP eCLIP6.09□□□□□ -1.43
LRRC28-205ENST00000558248 YIPF2Q9BWQ6 316 aa6.09□□□□□ -1.43
LRRC28-205ENST00000558248 TMPRSS13Q9BYE2 586 aa6.09□□□□□ -1.43
LRRC28-205ENST00000558248 BCO2Q9BYV7 579 aa6.09□□□□□ -1.43
LRRC28-205ENST00000558248 SRCIN1Q9C0H9 1055 aa6.09□□□□□ -1.43
LRRC28-205ENST00000558248 RAD18Q9NS91 495 aa6.09□□□□□ -1.43
LRRC28-205ENST00000558248 TSPOAP1O95153 1857 aa6.09□□□□□ -1.44
LRRC28-205ENST00000558248 GIPC1O14908 333 aa6.08□□□□□ -1.44
LRRC28-205ENST00000558248 BMP3P12645 472 aa6.08□□□□□ -1.44
LRRC28-205ENST00000558248 ITGB7P26010 798 aa6.08□□□□□ -1.44
LRRC28-205ENST00000558248 USP11P51784 963 aa6.08□□□□□ -1.44
LRRC28-205ENST00000558248 PDE3AQ14432 1141 aa6.08□□□□□ -1.44
LRRC28-205ENST00000558248 FAM20CQ8IXL6 584 aa6.08□□□□□ -1.44
LRRC28-205ENST00000558248 ARMC10Q8N2F6 343 aa6.08□□□□□ -1.44
LRRC28-205ENST00000558248 GPN3Q9UHW5 284 aaPredicted RBP6.08□□□□□ -1.44
LRRC28-205ENST00000558248 SPG7Q9UQ90 795 aa6.08□□□□□ -1.44
LRRC28-205ENST00000558248 FGD5Q6ZNL6 1462 aa6.08□□□□□ -1.44
LRRC28-205ENST00000558248 DIP2BQ9P265 1576 aa6.07□□□□□ -1.44
LRRC28-205ENST00000558248 RXRBP28702 533 aa6.07□□□□□ -1.44
LRRC28-205ENST00000558248 GSTT1P30711 240 aa6.07□□□□□ -1.44
LRRC28-205ENST00000558248 PI16Q6UXB8 463 aa6.07□□□□□ -1.44
LRRC28-205ENST00000558248 BEND4Q6ZU67 534 aa6.07□□□□□ -1.44
LRRC28-205ENST00000558248 CLEC10AQ8IUN9 316 aa6.07□□□□□ -1.44
LRRC28-205ENST00000558248 GLIS3Q8NEA6 775 aa6.07□□□□□ -1.44
LRRC28-205ENST00000558248 NRSN2Q9GZP1 204 aa6.07□□□□□ -1.44
LRRC28-205ENST00000558248 TMEM39AQ9NV64 488 aa6.07□□□□□ -1.44
LRRC28-205ENST00000558248 AKAP2Q9Y2D5 859 aa6.07□□□□□ -1.44
LRRC28-205ENST00000558248 WDR97A6NE52 1622 aa6.07□□□□□ -1.44
LRRC28-205ENST00000558248 TIAF1O95411 115 aa6.06□□□□□ -1.44
LRRC28-205ENST00000558248 IGLV1-40P01703 118 aa6.06□□□□□ -1.44
LRRC28-205ENST00000558248 MAP4P27816 1152 aaKnown RBP6.06□□□□□ -1.44
LRRC28-205ENST00000558248 NXPE4Q6UWF7 544 aa6.06□□□□□ -1.44
LRRC28-205ENST00000558248 GIMAP7Q8NHV1 300 aa6.06□□□□□ -1.44
LRRC28-205ENST00000558248 FAM83CQ9BQN1 747 aa6.06□□□□□ -1.44
LRRC28-205ENST00000558248 TRIM56Q9BRZ2 755 aaKnown RBP6.06□□□□□ -1.44
LRRC28-205ENST00000558248 C7orf69Q9H7B7 122 aa6.06□□□□□ -1.44
LRRC28-205ENST00000558248 PRG4Q92954 1404 aaPredicted RBP6.06□□□□□ -1.44
LRRC28-205ENST00000558248 MAPKBP1O60336 1514 aa6.05□□□□□ -1.44
LRRC28-205ENST00000558248 DLGAP3O95886 979 aa6.05□□□□□ -1.44
LRRC28-205ENST00000558248 LDHBP07195 334 aaKnown RBP6.05□□□□□ -1.44
LRRC28-205ENST00000558248 ADH5P11766 374 aa6.05□□□□□ -1.44
LRRC28-205ENST00000558248 ZNF157P51786 506 aaPredicted RBP6.05□□□□□ -1.44
LRRC28-205ENST00000558248 SOX4Q06945 474 aaPredicted RBP6.05□□□□□ -1.44
LRRC28-205ENST00000558248 NFIAQ12857 509 aa6.05□□□□□ -1.44
LRRC28-205ENST00000558248 AKAP4Q5JQC9 854 aa6.05□□□□□ -1.44
LRRC28-205ENST00000558248 RNF43Q68DV7 783 aa6.05□□□□□ -1.44
LRRC28-205ENST00000558248 TRIM42Q8IWZ5 723 aa6.05□□□□□ -1.44
LRRC28-205ENST00000558248 FAM177A1Q8N128 213 aaPredicted RBP6.05□□□□□ -1.44
LRRC28-205ENST00000558248 DBNDD2Q9BQY9 259 aa6.05□□□□□ -1.44
LRRC28-205ENST00000558248 CEP44Q9C0F1 390 aa6.05□□□□□ -1.44
LRRC28-205ENST00000558248 PPM1HQ9ULR3 514 aa6.05□□□□□ -1.44
LRRC28-205ENST00000558248 RNF112Q9ULX5 631 aa6.05□□□□□ -1.44
LRRC28-205ENST00000558248 AP4E1Q9UPM8 1137 aa6.05□□□□□ -1.44
LRRC28-205ENST00000558248 SAMM50Q9Y512 469 aa6.05□□□□□ -1.44
LRRC28-205ENST00000558248 NUP160Q12769 1436 aa6.05□□□□□ -1.44
LRRC28-205ENST00000558248 GRIN2AQ12879 1464 aa6.04□□□□□ -1.44
LRRC28-205ENST00000558248 SHROOM2Q13796 1616 aa6.04□□□□□ -1.44
LRRC28-205ENST00000558248 HMX2A2RU54 273 aa6.04□□□□□ -1.44
LRRC28-205ENST00000558248 P4HBP07237 508 aaKnown RBP6.04□□□□□ -1.44
LRRC28-205ENST00000558248 CANXP27824 592 aaKnown RBP6.04□□□□□ -1.44
LRRC28-205ENST00000558248 COL19A1Q14993 1142 aa6.04□□□□□ -1.44
LRRC28-205ENST00000558248 PAOXQ6QHF9 649 aa6.04□□□□□ -1.44
LRRC28-205ENST00000558248 Q8N3U1 123 aa6.04□□□□□ -1.44
LRRC28-205ENST00000558248 FRMD6Q96NE9 622 aa6.04□□□□□ -1.44
LRRC28-205ENST00000558248 COL17A1Q9UMD9 1497 aaPredicted RBP6.03□□□□□ -1.44
LRRC28-205ENST00000558248 FAM95CA0A1B0GW59 222 aa6.03□□□□□ -1.44
LRRC28-205ENST00000558248 SLFN14P0C7P3 912 aa6.03□□□□□ -1.44
LRRC28-205ENST00000558248 DRD2P14416 443 aa6.03□□□□□ -1.44
LRRC28-205ENST00000558248 FAAP100Q0VG06 881 aa6.03□□□□□ -1.44
LRRC28-205ENST00000558248 LRP8Q14114 963 aa6.03□□□□□ -1.44
LRRC28-205ENST00000558248 SGO2Q562F6 1265 aa6.03□□□□□ -1.44
LRRC28-205ENST00000558248 DYMQ7RTS9 669 aa6.03□□□□□ -1.44
LRRC28-205ENST00000558248 SULF2Q8IWU5 870 aa6.03□□□□□ -1.44
LRRC28-205ENST00000558248 EMILIN2Q9BXX0 1053 aa6.03□□□□□ -1.44
LRRC28-205ENST00000558248 ZFP64Q9NPA5 681 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms