RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 FMR1Q06787 632 aaKnown RBP eCLIP30.99■■■□□ 2.55
SMAD6-202ENST00000557916 CDC42EP5Q6NZY7 148 aa30.99■■■□□ 2.55
SMAD6-202ENST00000557916 PLEKHM2Q8IWE5 1019 aa30.99■■■□□ 2.55
SMAD6-202ENST00000557916 USP40Q9NVE5 1235 aa30.99■■■□□ 2.55
SMAD6-202ENST00000557916 TMOD2Q9NZR1 351 aa30.99■■■□□ 2.55
SMAD6-202ENST00000557916 ECM29Q5VYK3 1845 aa30.99■■■□□ 2.55
SMAD6-202ENST00000557916 MAP4K4O95819 1239 aaPredicted RBP30.98■■■□□ 2.55
SMAD6-202ENST00000557916 CYP7A1P22680 504 aa30.98■■■□□ 2.55
SMAD6-202ENST00000557916 MAST2Q6P0Q8 1798 aa30.98■■■□□ 2.55
SMAD6-202ENST00000557916 CACNB3P54284 484 aa30.98■■■□□ 2.55
SMAD6-202ENST00000557916 SLC9C2Q5TAH2 1124 aa30.98■■■□□ 2.55
SMAD6-202ENST00000557916 TMED8Q6PL24 325 aaPredicted RBP30.98■■■□□ 2.55
SMAD6-202ENST00000557916 DOCK2Q92608 1830 aa30.97■■■□□ 2.55
SMAD6-202ENST00000557916 TNFAIP1Q13829 316 aa30.97■■■□□ 2.55
SMAD6-202ENST00000557916 ADGRA1Q86SQ6 560 aa30.97■■■□□ 2.55
SMAD6-202ENST00000557916 NOL10Q9BSC4 688 aaKnown RBP30.97■■■□□ 2.55
SMAD6-202ENST00000557916 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.97■■■□□ 2.55
SMAD6-202ENST00000557916 DEFB129Q9H1M3 183 aa30.97■■■□□ 2.55
SMAD6-202ENST00000557916 TCP10L2B9ZVM9 353 aa30.96■■■□□ 2.55
SMAD6-202ENST00000557916 PDE6AP16499 860 aa30.96■■■□□ 2.55
SMAD6-202ENST00000557916 PDE4AP27815 886 aa30.96■■■□□ 2.55
SMAD6-202ENST00000557916 OSBPL3Q9H4L5 887 aa30.96■■■□□ 2.55
SMAD6-202ENST00000557916 BAG3O95817 575 aa30.95■■■□□ 2.54
SMAD6-202ENST00000557916 KBTBD3Q8NAB2 608 aa30.95■■■□□ 2.54
SMAD6-202ENST00000557916 PPP4R2Q9NY27 417 aa30.95■■■□□ 2.54
SMAD6-202ENST00000557916 TNNI2P48788 182 aa30.94■■■□□ 2.54
SMAD6-202ENST00000557916 RASA3Q14644 834 aa30.94■■■□□ 2.54
SMAD6-202ENST00000557916 FKBP1CQ5VVH2 108 aa30.94■■■□□ 2.54
SMAD6-202ENST00000557916 PRAMEF18Q5VWM3 479 aa30.94■■■□□ 2.54
SMAD6-202ENST00000557916 CDCA5Q96FF9 252 aa30.94■■■□□ 2.54
SMAD6-202ENST00000557916 AATFQ9NY61 560 aaKnown RBP eCLIP30.94■■■□□ 2.54
SMAD6-202ENST00000557916 APLP1P51693 650 aa30.93■■■□□ 2.54
SMAD6-202ENST00000557916 PPP2R3BQ9Y5P8 575 aa30.93■■■□□ 2.54
SMAD6-202ENST00000557916 ZNF532Q9HCE3 1301 aa30.93■■■□□ 2.54
SMAD6-202ENST00000557916 RHBDL3P58872 404 aa30.92■■■□□ 2.54
SMAD6-202ENST00000557916 ZSCAN25Q6NSZ9 544 aa30.92■■■□□ 2.54
SMAD6-202ENST00000557916 ZNF408Q9H9D4 720 aa30.92■■■□□ 2.54
SMAD6-202ENST00000557916 CELF2O95319 508 aaKnown RBP30.91■■■□□ 2.54
SMAD6-202ENST00000557916 ADD2P35612 726 aa30.91■■■□□ 2.54
SMAD6-202ENST00000557916 PPP4CP60510 307 aa30.91■■■□□ 2.54
SMAD6-202ENST00000557916 TCRBV5S4A2TA0A5A2 114 aa30.9■■■□□ 2.54
SMAD6-202ENST00000557916 HSPA6P17066 643 aa30.9■■■□□ 2.54
SMAD6-202ENST00000557916 NFIAQ12857 509 aa30.9■■■□□ 2.54
SMAD6-202ENST00000557916 MIGA1Q8NAN2 632 aa30.9■■■□□ 2.54
SMAD6-202ENST00000557916 CNTNAP1P78357 1384 aa30.9■■■□□ 2.54
SMAD6-202ENST00000557916 PLCG2P16885 1265 aa30.9■■■□□ 2.54
SMAD6-202ENST00000557916 CST9Q5W186 159 aa30.9■■■□□ 2.54
SMAD6-202ENST00000557916 FAM83AQ86UY5 434 aa30.9■■■□□ 2.54
SMAD6-202ENST00000557916 SH3RF3Q8TEJ3 882 aaPredicted RBP30.9■■■□□ 2.54
SMAD6-202ENST00000557916 IDI2Q9BXS1 227 aa30.9■■■□□ 2.54
SMAD6-202ENST00000557916 DYNLL1P63167 89 aaKnown RBP30.89■■■□□ 2.53
SMAD6-202ENST00000557916 FSD1Q9BTV5 496 aa30.89■■■□□ 2.53
SMAD6-202ENST00000557916 TMEM39BQ9GZU3 492 aa30.89■■■□□ 2.53
SMAD6-202ENST00000557916 TMEM88BA6NKF7 163 aa30.88■■■□□ 2.53
SMAD6-202ENST00000557916 WDHD1O75717 1129 aaPredicted RBP30.88■■■□□ 2.53
SMAD6-202ENST00000557916 UBE3CQ15386 1083 aa30.88■■■□□ 2.53
SMAD6-202ENST00000557916 SLFNL1Q499Z3 407 aa30.88■■■□□ 2.53
SMAD6-202ENST00000557916 TEX11Q8IYF3 940 aa30.88■■■□□ 2.53
SMAD6-202ENST00000557916 EVI5LQ96CN4 794 aa30.88■■■□□ 2.53
SMAD6-202ENST00000557916 FAM198AQ9UFP1 575 aa30.88■■■□□ 2.53
SMAD6-202ENST00000557916 CHGBP05060 677 aa30.87■■■□□ 2.53
SMAD6-202ENST00000557916 TCP10Q12799 353 aa30.87■■■□□ 2.53
SMAD6-202ENST00000557916 LRRFIP1Q32MZ4 808 aaKnown RBP30.87■■■□□ 2.53
SMAD6-202ENST00000557916 CERS3Q8IU89 383 aa30.87■■■□□ 2.53
SMAD6-202ENST00000557916 FAM151AQ8WW52 585 aa30.87■■■□□ 2.53
SMAD6-202ENST00000557916 TRIM6-TRIM34B2RNG4 842 aa30.86■■■□□ 2.53
SMAD6-202ENST00000557916 RGS3P49796 1198 aa30.86■■■□□ 2.53
SMAD6-202ENST00000557916 RFX7Q2KHR2 1363 aa30.86■■■□□ 2.53
SMAD6-202ENST00000557916 MAGEB6P1A0A0J9YX57 407 aa30.85■■■□□ 2.53
SMAD6-202ENST00000557916 RNF113AO15541 343 aaKnown RBP30.85■■■□□ 2.53
SMAD6-202ENST00000557916 ZFYP08048 801 aaPredicted RBP30.85■■■□□ 2.53
SMAD6-202ENST00000557916 NF2P35240 595 aa30.85■■■□□ 2.53
SMAD6-202ENST00000557916 PICALMQ13492 652 aa30.85■■■□□ 2.53
SMAD6-202ENST00000557916 NBPF12Q5TAG4 269 aaPredicted RBP30.85■■■□□ 2.53
SMAD6-202ENST00000557916 TEPSINQ96N21 525 aa30.85■■■□□ 2.53
SMAD6-202ENST00000557916 DDX4Q9NQI0 724 aaKnown RBP30.85■■■□□ 2.53
SMAD6-202ENST00000557916 TRPM7Q96QT4 1865 aa30.85■■■□□ 2.53
SMAD6-202ENST00000557916 ENTPD3O75355 529 aa30.84■■■□□ 2.53
SMAD6-202ENST00000557916 SUPT20HL1Q3ZLR7 823 aa30.84■■■□□ 2.53
SMAD6-202ENST00000557916 RIOK1Q9BRS2 568 aaKnown RBP30.84■■■□□ 2.53
SMAD6-202ENST00000557916 CREBZFQ9NS37 354 aa30.84■■■□□ 2.53
SMAD6-202ENST00000557916 CDAN1Q8IWY9 1227 aa30.83■■■□□ 2.53
SMAD6-202ENST00000557916 RILPL2Q969X0 211 aa30.83■■■□□ 2.53
SMAD6-202ENST00000557916 GBA2Q9HCG7 927 aaPredicted RBP30.83■■■□□ 2.53
SMAD6-202ENST00000557916 NPM3O75607 178 aaKnown RBP30.82■■■□□ 2.52
SMAD6-202ENST00000557916 ZFPM1Q8IX07 1006 aa30.82■■■□□ 2.52
SMAD6-202ENST00000557916 C2orf69Q8N8R5 385 aa30.82■■■□□ 2.52
SMAD6-202ENST00000557916 MYH7P12883 1935 aa30.82■■■□□ 2.52
SMAD6-202ENST00000557916 TTC22Q5TAA0 569 aa30.81■■■□□ 2.52
SMAD6-202ENST00000557916 TGFBRAP1Q8WUH2 860 aa30.81■■■□□ 2.52
SMAD6-202ENST00000557916 HTRA3P83110 453 aa30.81■■■□□ 2.52
SMAD6-202ENST00000557916 RPAP1Q9BWH6 1393 aaPredicted RBP30.81■■■□□ 2.52
SMAD6-202ENST00000557916 LCORLQ8N3X6 602 aa30.8■■■□□ 2.52
SMAD6-202ENST00000557916 APPBP2Q92624 585 aa30.8■■■□□ 2.52
SMAD6-202ENST00000557916 PUS7LQ9H0K6 701 aaKnown RBP30.8■■■□□ 2.52
SMAD6-202ENST00000557916 ARMT1Q9H993 441 aa30.8■■■□□ 2.52
SMAD6-202ENST00000557916 ABT1Q9ULW3 272 aaKnown RBP30.8■■■□□ 2.52
SMAD6-202ENST00000557916 MBD4O95243 580 aa30.79■■■□□ 2.52
SMAD6-202ENST00000557916 PRKG1Q13976 671 aa30.79■■■□□ 2.52
SMAD6-202ENST00000557916 TTLL12Q14166 644 aaPredicted RBP30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms