RNA–Protein interactions for RNA: ENST00000555632.5

GABRB3-209, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-209ENST00000555632 ZSWIM5Q9P217 1185 aa21.67■■□□□ 1.06
GABRB3-209ENST00000555632 XDHP47989 1333 aa21.66■■□□□ 1.06
GABRB3-209ENST00000555632 KDM4AO75164 1064 aa21.66■■□□□ 1.06
GABRB3-209ENST00000555632 FDPSP14324 419 aaKnown RBP21.66■■□□□ 1.06
GABRB3-209ENST00000555632 RXRBP28702 533 aa21.66■■□□□ 1.06
GABRB3-209ENST00000555632 NACAP1Q9BZK3 213 aa21.66■■□□□ 1.06
GABRB3-209ENST00000555632 CHD4Q14839 1912 aa21.66■■□□□ 1.06
GABRB3-209ENST00000555632 WDR19Q8NEZ3 1342 aa21.66■■□□□ 1.06
GABRB3-209ENST00000555632 SH2B2O14492 632 aaPredicted RBP21.65■■□□□ 1.06
GABRB3-209ENST00000555632 RXRAP19793 462 aa21.65■■□□□ 1.06
GABRB3-209ENST00000555632 AKNAD1Q5T1N1 836 aa21.65■■□□□ 1.06
GABRB3-209ENST00000555632 ANGEL1Q9UNK9 670 aaKnown RBP21.65■■□□□ 1.06
GABRB3-209ENST00000555632 LEMD3Q9Y2U8 911 aa21.65■■□□□ 1.06
GABRB3-209ENST00000555632 MBD3O95983 291 aa21.65■■□□□ 1.06
GABRB3-209ENST00000555632 IGDCC4Q8TDY8 1250 aa21.65■■□□□ 1.06
GABRB3-209ENST00000555632 RRP12Q5JTH9 1297 aaKnown RBP21.64■■□□□ 1.06
GABRB3-209ENST00000555632 L1TD1Q5T7N2 865 aaKnown RBP21.64■■□□□ 1.06
GABRB3-209ENST00000555632 RBM17Q96I25 401 aaKnown RBP21.64■■□□□ 1.06
GABRB3-209ENST00000555632 GRPEL1Q9HAV7 217 aa21.64■■□□□ 1.06
GABRB3-209ENST00000555632 PDS5AQ29RF7 1337 aaKnown RBP21.64■■□□□ 1.05
GABRB3-209ENST00000555632 BAZ2AQ9UIF9 1905 aaKnown RBP21.64■■□□□ 1.05
GABRB3-209ENST00000555632 CYP2D7A0A087X1C5 515 aa21.64■■□□□ 1.05
GABRB3-209ENST00000555632 MINDY4BA8MYZ0 360 aa21.64■■□□□ 1.05
GABRB3-209ENST00000555632 EVX2Q03828 476 aa21.64■■□□□ 1.05
GABRB3-209ENST00000555632 GRIK5Q16478 980 aa21.64■■□□□ 1.05
GABRB3-209ENST00000555632 MFSD6Q6ZSS7 791 aa21.64■■□□□ 1.05
GABRB3-209ENST00000555632 AATFQ9NY61 560 aaKnown RBP eCLIP21.64■■□□□ 1.05
GABRB3-209ENST00000555632 RGS17Q9UGC6 210 aaPredicted RBP21.64■■□□□ 1.05
GABRB3-209ENST00000555632 H3BQV1 296 aa21.63■■□□□ 1.05
GABRB3-209ENST00000555632 PDIA4P13667 645 aaKnown RBP21.63■■□□□ 1.05
GABRB3-209ENST00000555632 PPARAQ07869 468 aa21.63■■□□□ 1.05
GABRB3-209ENST00000555632 IFFO2Q5TF58 517 aa21.63■■□□□ 1.05
GABRB3-209ENST00000555632 STAG1Q8WVM7 1258 aa21.63■■□□□ 1.05
GABRB3-209ENST00000555632 ZKSCAN3Q9BRR0 538 aa21.63■■□□□ 1.05
GABRB3-209ENST00000555632 TFIP11Q9UBB9 837 aaKnown RBP21.63■■□□□ 1.05
GABRB3-209ENST00000555632 TIAM2Q8IVF5 1701 aa21.63■■□□□ 1.05
GABRB3-209ENST00000555632 ZNF445P59923 1031 aa21.62■■□□□ 1.05
GABRB3-209ENST00000555632 HMGN5P82970 282 aaKnown RBP21.62■■□□□ 1.05
GABRB3-209ENST00000555632 GUCY1B3Q02153 619 aa21.62■■□□□ 1.05
GABRB3-209ENST00000555632 RESTQ13127 1097 aa21.62■■□□□ 1.05
GABRB3-209ENST00000555632 LY9Q9HBG7 655 aa21.62■■□□□ 1.05
GABRB3-209ENST00000555632 TOMM22Q9NS69 142 aa21.62■■□□□ 1.05
GABRB3-209ENST00000555632 KLRG2A4D1S0 409 aaPredicted RBP21.62■■□□□ 1.05
GABRB3-209ENST00000555632 UFL1O94874 794 aa21.62■■□□□ 1.05
GABRB3-209ENST00000555632 HOXA10P31260 410 aaPredicted RBP21.62■■□□□ 1.05
GABRB3-209ENST00000555632 TTC6Q86TZ1 520 aa21.62■■□□□ 1.05
GABRB3-209ENST00000555632 TDRD7Q8NHU6 1098 aaKnown RBP21.62■■□□□ 1.05
GABRB3-209ENST00000555632 MYL10Q9BUA6 226 aa21.62■■□□□ 1.05
GABRB3-209ENST00000555632 SYCE3A1L190 88 aa21.61■■□□□ 1.05
GABRB3-209ENST00000555632 ADD1P35611 737 aaKnown RBP21.61■■□□□ 1.05
GABRB3-209ENST00000555632 APOA5Q6Q788 366 aa21.61■■□□□ 1.05
GABRB3-209ENST00000555632 CCDC144CPQ8IYA2 1237 aa21.61■■□□□ 1.05
GABRB3-209ENST00000555632 ANKRD31Q8N7Z5 1873 aa21.61■■□□□ 1.05
GABRB3-209ENST00000555632 MRE11P49959 708 aa21.61■■□□□ 1.05
GABRB3-209ENST00000555632 TMEM67Q5HYA8 995 aa21.61■■□□□ 1.05
GABRB3-209ENST00000555632 GJB4Q9NTQ9 266 aa21.61■■□□□ 1.05
GABRB3-209ENST00000555632 POLLQ9UGP5 575 aa21.61■■□□□ 1.05
GABRB3-209ENST00000555632 CDC27P30260 824 aa21.6■■□□□ 1.05
GABRB3-209ENST00000555632 MSL1Q68DK7 614 aa21.6■■□□□ 1.05
GABRB3-209ENST00000555632 OTUD7BQ6GQQ9 843 aa21.6■■□□□ 1.05
GABRB3-209ENST00000555632 TMEM87BQ96K49 555 aa21.6■■□□□ 1.05
GABRB3-209ENST00000555632 IFIT3O14879 490 aaKnown RBP21.59■■□□□ 1.05
GABRB3-209ENST00000555632 UBE2HP62256 183 aa21.59■■□□□ 1.05
GABRB3-209ENST00000555632 KRT85P78386 507 aa21.59■■□□□ 1.05
GABRB3-209ENST00000555632 OLFM4Q6UX06 510 aa21.59■■□□□ 1.05
GABRB3-209ENST00000555632 MICU3Q86XE3 530 aa21.59■■□□□ 1.05
GABRB3-209ENST00000555632 NLGN1Q8N2Q7 840 aa21.59■■□□□ 1.05
GABRB3-209ENST00000555632 CNNM2Q9H8M5 875 aa21.59■■□□□ 1.05
GABRB3-209ENST00000555632 BBOX1O75936 387 aa21.59■■□□□ 1.05
GABRB3-209ENST00000555632 POTEAQ6S8J7 498 aa21.59■■□□□ 1.05
GABRB3-209ENST00000555632 KRT23Q9C075 422 aa21.59■■□□□ 1.05
GABRB3-209ENST00000555632 CTR9Q6PD62 1173 aa21.58■■□□□ 1.05
GABRB3-209ENST00000555632 ZNF804AQ7Z570 1209 aa21.58■■□□□ 1.05
GABRB3-209ENST00000555632 CRAMP1Q96RY5 1269 aa21.58■■□□□ 1.05
GABRB3-209ENST00000555632 GGA1Q9UJY5 639 aa21.58■■□□□ 1.05
GABRB3-209ENST00000555632 CPLX1O14810 134 aa21.58■■□□□ 1.04
GABRB3-209ENST00000555632 MMP10P09238 476 aa21.58■■□□□ 1.04
GABRB3-209ENST00000555632 METAP2P50579 478 aaKnown RBP eCLIP21.58■■□□□ 1.04
GABRB3-209ENST00000555632 DIXDC1Q155Q3 683 aa21.58■■□□□ 1.04
GABRB3-209ENST00000555632 NFXL1Q6ZNB6 911 aa21.58■■□□□ 1.04
GABRB3-209ENST00000555632 C15orf52Q6ZUT6 534 aaKnown RBP21.58■■□□□ 1.04
GABRB3-209ENST00000555632 SGMS1Q86VZ5 419 aa21.58■■□□□ 1.04
GABRB3-209ENST00000555632 DZIP1Q86YF9 867 aaKnown RBP21.58■■□□□ 1.04
GABRB3-209ENST00000555632 TBC1D16Q8TBP0 767 aa21.58■■□□□ 1.04
GABRB3-209ENST00000555632 BRIP1Q9BX63 1249 aa21.58■■□□□ 1.04
GABRB3-209ENST00000555632 CD209Q9NNX6 404 aa21.58■■□□□ 1.04
GABRB3-209ENST00000555632 ISY1Q9ULR0 285 aaKnown RBP21.58■■□□□ 1.04
GABRB3-209ENST00000555632 CCDC88AQ3V6T2 1871 aa21.57■■□□□ 1.04
GABRB3-209ENST00000555632 USP17L12C9JPN9 530 aa21.57■■□□□ 1.04
GABRB3-209ENST00000555632 USP17L21D6R901 530 aa21.57■■□□□ 1.04
GABRB3-209ENST00000555632 FAM217BQ9NTX9 383 aaPredicted RBP21.57■■□□□ 1.04
GABRB3-209ENST00000555632 ORC3Q9UBD5 711 aaPredicted RBP21.57■■□□□ 1.04
GABRB3-209ENST00000555632 ANAPC4Q9UJX5 808 aa21.57■■□□□ 1.04
GABRB3-209ENST00000555632 DHX16O60231 1041 aaKnown RBP21.56■■□□□ 1.04
GABRB3-209ENST00000555632 PRDM1O75626 825 aa21.56■■□□□ 1.04
GABRB3-209ENST00000555632 ATP2B4P23634 1241 aa21.56■■□□□ 1.04
GABRB3-209ENST00000555632 FTOQ9C0B1 505 aaKnown RBP eCLIP21.56■■□□□ 1.04
GABRB3-209ENST00000555632 DCP1AQ9NPI6 582 aaPredicted RBP21.56■■□□□ 1.04
GABRB3-209ENST00000555632 LDHBP07195 334 aaKnown RBP21.56■■□□□ 1.04
GABRB3-209ENST00000555632 SRGNP10124 158 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms