RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 TDO2P48775 406 aa12.47□□□□□ -0.41
TMEM55B-205ENST00000554028 RBM5P52756 815 aaKnown RBP eCLIP12.47□□□□□ -0.41
TMEM55B-205ENST00000554028 PPP4CP60510 307 aa12.47□□□□□ -0.41
TMEM55B-205ENST00000554028 NECTIN1Q15223 517 aa12.47□□□□□ -0.41
TMEM55B-205ENST00000554028 DIXDC1Q155Q3 683 aa12.47□□□□□ -0.41
TMEM55B-205ENST00000554028 IMMTQ16891 758 aaKnown RBP12.47□□□□□ -0.41
TMEM55B-205ENST00000554028 HHIPL2Q6UWX4 724 aa12.47□□□□□ -0.41
TMEM55B-205ENST00000554028 KIAA0825Q8IV33 1275 aa12.47□□□□□ -0.41
TMEM55B-205ENST00000554028 AMOTL1Q8IY63 956 aa12.47□□□□□ -0.41
TMEM55B-205ENST00000554028 LCORLQ8N3X6 602 aa12.47□□□□□ -0.41
TMEM55B-205ENST00000554028 CERS5Q8N5B7 392 aa12.47□□□□□ -0.41
TMEM55B-205ENST00000554028 AGBL3Q8NEM8 1001 aa12.47□□□□□ -0.41
TMEM55B-205ENST00000554028 NAPBQ9H115 298 aa12.47□□□□□ -0.41
TMEM55B-205ENST00000554028 ATP8A2Q9NTI2 1148 aa12.47□□□□□ -0.41
TMEM55B-205ENST00000554028 GPR75-ASB3A0A0A6YYF3 556 aa12.46□□□□□ -0.41
TMEM55B-205ENST00000554028 PSMD14O00487 310 aa12.46□□□□□ -0.41
TMEM55B-205ENST00000554028 ZNF213O14771 459 aa12.46□□□□□ -0.41
TMEM55B-205ENST00000554028 FGAP02671 866 aa12.46□□□□□ -0.41
TMEM55B-205ENST00000554028 PSMA5P28066 241 aa12.46□□□□□ -0.41
TMEM55B-205ENST00000554028 BTDP43251 543 aa12.46□□□□□ -0.41
TMEM55B-205ENST00000554028 USP5P45974 858 aa12.46□□□□□ -0.41
TMEM55B-205ENST00000554028 DYNLL1P63167 89 aaKnown RBP12.46□□□□□ -0.41
TMEM55B-205ENST00000554028 CXCL9Q07325 125 aa12.46□□□□□ -0.41
TMEM55B-205ENST00000554028 RABEP1Q15276 862 aa12.46□□□□□ -0.41
TMEM55B-205ENST00000554028 ALX1Q15699 326 aa12.46□□□□□ -0.41
TMEM55B-205ENST00000554028 GRIK5Q16478 980 aa12.46□□□□□ -0.41
TMEM55B-205ENST00000554028 VPS53Q5VIR6 699 aa12.46□□□□□ -0.41
TMEM55B-205ENST00000554028 CREB3L3Q68CJ9 461 aa12.46□□□□□ -0.41
TMEM55B-205ENST00000554028 GIMAP6Q6P9H5 292 aa12.46□□□□□ -0.41
TMEM55B-205ENST00000554028 ADGRA1Q86SQ6 560 aa12.46□□□□□ -0.41
TMEM55B-205ENST00000554028 IFNL3Q8IZI9 196 aa12.46□□□□□ -0.41
TMEM55B-205ENST00000554028 RIOK1Q9BRS2 568 aaKnown RBP12.46□□□□□ -0.41
TMEM55B-205ENST00000554028 MXD3Q9BW11 206 aa12.46□□□□□ -0.41
TMEM55B-205ENST00000554028 FOXD4L1Q9NU39 408 aa12.46□□□□□ -0.41
TMEM55B-205ENST00000554028 DAXXQ9UER7 740 aaPredicted RBP12.46□□□□□ -0.41
TMEM55B-205ENST00000554028 SERPINA10Q9UK55 444 aa12.46□□□□□ -0.41
TMEM55B-205ENST00000554028 GAKO14976 1311 aa12.45□□□□□ -0.42
TMEM55B-205ENST00000554028 SLC27A2O14975 620 aa12.45□□□□□ -0.42
TMEM55B-205ENST00000554028 PRKAR2AP13861 404 aaKnown RBP12.45□□□□□ -0.42
TMEM55B-205ENST00000554028 RPS12P25398 132 aaKnown RBP12.45□□□□□ -0.42
TMEM55B-205ENST00000554028 CRKP46108 304 aa12.45□□□□□ -0.42
TMEM55B-205ENST00000554028 SCNN1DP51172 638 aa12.45□□□□□ -0.42
TMEM55B-205ENST00000554028 LHX8Q68G74 356 aa12.45□□□□□ -0.42
TMEM55B-205ENST00000554028 ZNF384Q8TF68 577 aa12.45□□□□□ -0.42
TMEM55B-205ENST00000554028 GSG1L2A8MUP6 293 aa12.44□□□□□ -0.42
TMEM55B-205ENST00000554028 FZD9O00144 591 aa12.44□□□□□ -0.42
TMEM55B-205ENST00000554028 ST18O60284 1047 aa12.44□□□□□ -0.42
TMEM55B-205ENST00000554028 USP17L8P0C7I0 530 aa12.44□□□□□ -0.42
TMEM55B-205ENST00000554028 BECN1Q14457 450 aa12.44□□□□□ -0.42
TMEM55B-205ENST00000554028 TEX11Q8IYF3 940 aa12.44□□□□□ -0.42
TMEM55B-205ENST00000554028 ZDHHC15Q96MV8 337 aa12.44□□□□□ -0.42
TMEM55B-205ENST00000554028 USP40Q9NVE5 1235 aa12.44□□□□□ -0.42
TMEM55B-205ENST00000554028 DAGLAQ9Y4D2 1042 aa12.44□□□□□ -0.42
TMEM55B-205ENST00000554028 SNX14Q9Y5W7 946 aa12.44□□□□□ -0.42
TMEM55B-205ENST00000554028 GJA3Q9Y6H8 435 aa12.44□□□□□ -0.42
TMEM55B-205ENST00000554028 ZMYM6O95789 1325 aa12.43□□□□□ -0.42
TMEM55B-205ENST00000554028 PRKAB2O43741 272 aa12.43□□□□□ -0.42
TMEM55B-205ENST00000554028 SLC3A2P08195 630 aaKnown RBP12.43□□□□□ -0.42
TMEM55B-205ENST00000554028 HMGB1P09429 215 aaKnown RBP12.43□□□□□ -0.42
TMEM55B-205ENST00000554028 YBX3P16989 372 aaKnown RBP eCLIP12.43□□□□□ -0.42
TMEM55B-205ENST00000554028 TRDNQ13061 729 aa12.43□□□□□ -0.42
TMEM55B-205ENST00000554028 DLGAP5Q15398 846 aa12.43□□□□□ -0.42
TMEM55B-205ENST00000554028 TSGA10IPQ3SY00 556 aa12.43□□□□□ -0.42
TMEM55B-205ENST00000554028 SH3RF3Q8TEJ3 882 aaPredicted RBP12.43□□□□□ -0.42
TMEM55B-205ENST00000554028 SDR42E1Q8WUS8 393 aa12.43□□□□□ -0.42
TMEM55B-205ENST00000554028 KCNB2Q92953 911 aa12.43□□□□□ -0.42
TMEM55B-205ENST00000554028 TM6SF1Q9BZW5 370 aa12.43□□□□□ -0.42
TMEM55B-205ENST00000554028 TMOD2Q9NZR1 351 aa12.43□□□□□ -0.42
TMEM55B-205ENST00000554028 RNF181Q9P0P0 153 aa12.43□□□□□ -0.42
TMEM55B-205ENST00000554028 BRCA1P38398 1863 aaKnown RBP12.42□□□□□ -0.42
TMEM55B-205ENST00000554028 DOCK2Q92608 1830 aa12.42□□□□□ -0.42
TMEM55B-205ENST00000554028 MYO1BO43795 1136 aa12.42□□□□□ -0.42
TMEM55B-205ENST00000554028 CYP21A2P08686 494 aa12.42□□□□□ -0.42
TMEM55B-205ENST00000554028 CFAP100Q494V2 611 aa12.42□□□□□ -0.42
TMEM55B-205ENST00000554028 TGFBRAP1Q8WUH2 860 aa12.42□□□□□ -0.42
TMEM55B-205ENST00000554028 DPF2Q92785 391 aa12.42□□□□□ -0.42
TMEM55B-205ENST00000554028 JAKMIP1Q96N16 626 aaKnown RBP12.42□□□□□ -0.42
TMEM55B-205ENST00000554028 GMLQ99445 158 aa12.42□□□□□ -0.42
TMEM55B-205ENST00000554028 RNF41Q9H4P4 317 aaPredicted RBP12.42□□□□□ -0.42
TMEM55B-205ENST00000554028 MCM9Q9NXL9 1143 aa12.42□□□□□ -0.42
TMEM55B-205ENST00000554028 ARPP21Q9UBL0 812 aaPredicted RBP12.42□□□□□ -0.42
TMEM55B-205ENST00000554028 PALD1Q9ULE6 856 aa12.42□□□□□ -0.42
TMEM55B-205ENST00000554028 CYP46A1Q9Y6A2 500 aa12.42□□□□□ -0.42
TMEM55B-205ENST00000554028 MYH13Q9UKX3 1938 aa12.42□□□□□ -0.42
TMEM55B-205ENST00000554028 MINDY4BA8MYZ0 360 aa12.41□□□□□ -0.42
TMEM55B-205ENST00000554028 H7C1D1 291 aa12.41□□□□□ -0.42
TMEM55B-205ENST00000554028 POLR3DP05423 398 aaPredicted RBP12.41□□□□□ -0.42
TMEM55B-205ENST00000554028 NEK4P51957 841 aa12.41□□□□□ -0.42
TMEM55B-205ENST00000554028 C9orf131Q5VYM1 1079 aa12.41□□□□□ -0.42
TMEM55B-205ENST00000554028 DPY19L2Q6NUT2 758 aa12.41□□□□□ -0.42
TMEM55B-205ENST00000554028 BLOC1S2Q6QNY1 142 aa12.41□□□□□ -0.42
TMEM55B-205ENST00000554028 RALYLQ86SE5 291 aaKnown RBP12.41□□□□□ -0.42
TMEM55B-205ENST00000554028 RASEFQ8IZ41 740 aa12.41□□□□□ -0.42
TMEM55B-205ENST00000554028 GPC2Q8N158 579 aa12.41□□□□□ -0.42
TMEM55B-205ENST00000554028 IL17RAQ96F46 866 aa12.41□□□□□ -0.42
TMEM55B-205ENST00000554028 NEK1Q96PY6 1258 aa12.41□□□□□ -0.42
TMEM55B-205ENST00000554028 CNNM2Q9H8M5 875 aa12.41□□□□□ -0.42
TMEM55B-205ENST00000554028 DCP1AQ9NPI6 582 aaPredicted RBP12.41□□□□□ -0.42
TMEM55B-205ENST00000554028 ARFGEF1Q9Y6D6 1849 aa12.41□□□□□ -0.42
TMEM55B-205ENST00000554028 FER1L6Q2WGJ9 1857 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms