RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 FBF1Q8TES7 1133 aa7.55□□□□□ -1.2
SCFD1-210ENST00000553693 ADGRE2Q9UHX3 823 aa7.55□□□□□ -1.2
SCFD1-210ENST00000553693 CTSBP07858 339 aa7.54□□□□□ -1.2
SCFD1-210ENST00000553693 PPP2R3AQ06190 1150 aa7.54□□□□□ -1.2
SCFD1-210ENST00000553693 CPSF6Q16630 551 aaKnown RBP eCLIP7.54□□□□□ -1.2
SCFD1-210ENST00000553693 AKAP4Q5JQC9 854 aa7.54□□□□□ -1.2
SCFD1-210ENST00000553693 SHKBP1Q8TBC3 707 aa7.54□□□□□ -1.2
SCFD1-210ENST00000553693 ASB16Q96NS5 453 aa7.54□□□□□ -1.2
SCFD1-210ENST00000553693 BCO2Q9BYV7 579 aa7.54□□□□□ -1.2
SCFD1-210ENST00000553693 AP4E1Q9UPM8 1137 aa7.54□□□□□ -1.2
SCFD1-210ENST00000553693 SYNGAP1Q96PV0 1343 aa7.53□□□□□ -1.2
SCFD1-210ENST00000553693 ATP2B2Q01814 1243 aa7.53□□□□□ -1.2
SCFD1-210ENST00000553693 FMR1Q06787 632 aaKnown RBP eCLIP7.53□□□□□ -1.2
SCFD1-210ENST00000553693 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.53□□□□□ -1.2
SCFD1-210ENST00000553693 PI16Q6UXB8 463 aa7.53□□□□□ -1.2
SCFD1-210ENST00000553693 FBLIM1Q8WUP2 373 aa7.53□□□□□ -1.2
SCFD1-210ENST00000553693 MFSD14AQ96MC6 490 aa7.53□□□□□ -1.2
SCFD1-210ENST00000553693 ATG3Q9NT62 314 aa7.53□□□□□ -1.2
SCFD1-210ENST00000553693 GPN3Q9UHW5 284 aaPredicted RBP7.53□□□□□ -1.2
SCFD1-210ENST00000553693 ACTL7BQ9Y614 415 aa7.53□□□□□ -1.2
SCFD1-210ENST00000553693 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.52□□□□□ -1.21
SCFD1-210ENST00000553693 WDR64B1ANS9 1081 aa7.52□□□□□ -1.21
SCFD1-210ENST00000553693 C8AP07357 584 aa7.52□□□□□ -1.21
SCFD1-210ENST00000553693 MAPK8P45983 427 aa7.52□□□□□ -1.21
SCFD1-210ENST00000553693 FAAP100Q0VG06 881 aa7.52□□□□□ -1.21
SCFD1-210ENST00000553693 MAP7Q14244 749 aa7.52□□□□□ -1.21
SCFD1-210ENST00000553693 ALG1LQ6GMV1 187 aa7.52□□□□□ -1.21
SCFD1-210ENST00000553693 CDPF1Q6NVV7 123 aa7.52□□□□□ -1.21
SCFD1-210ENST00000553693 DYMQ7RTS9 669 aa7.52□□□□□ -1.21
SCFD1-210ENST00000553693 EZH1Q92800 747 aaPredicted RBP7.52□□□□□ -1.21
SCFD1-210ENST00000553693 SRCIN1Q9C0H9 1055 aa7.52□□□□□ -1.21
SCFD1-210ENST00000553693 TMEM39AQ9NV64 488 aa7.52□□□□□ -1.21
SCFD1-210ENST00000553693 AOC2O75106 756 aa7.51□□□□□ -1.21
SCFD1-210ENST00000553693 ECEL1O95672 775 aa7.51□□□□□ -1.21
SCFD1-210ENST00000553693 RAB6AP20340 208 aa7.51□□□□□ -1.21
SCFD1-210ENST00000553693 NFKBIBQ15653 356 aa7.51□□□□□ -1.21
SCFD1-210ENST00000553693 METTL22Q9BUU2 404 aaPredicted RBP7.51□□□□□ -1.21
SCFD1-210ENST00000553693 PRR19A6NJB7 356 aa7.5□□□□□ -1.21
SCFD1-210ENST00000553693 GSTT1P30711 240 aa7.5□□□□□ -1.21
SCFD1-210ENST00000553693 ZNF157P51786 506 aaPredicted RBP7.5□□□□□ -1.21
SCFD1-210ENST00000553693 NXPE4Q6UWF7 544 aa7.5□□□□□ -1.21
SCFD1-210ENST00000553693 FBXL6Q8N531 539 aa7.5□□□□□ -1.21
SCFD1-210ENST00000553693 WDR18Q9BV38 432 aa7.5□□□□□ -1.21
SCFD1-210ENST00000553693 OSBPL1AQ9BXW6 950 aa7.5□□□□□ -1.21
SCFD1-210ENST00000553693 KRT82Q9NSB4 513 aa7.5□□□□□ -1.21
SCFD1-210ENST00000553693 PIM2Q9P1W9 311 aa7.5□□□□□ -1.21
SCFD1-210ENST00000553693 AKAP2Q9Y2D5 859 aa7.5□□□□□ -1.21
SCFD1-210ENST00000553693 GIPC1O14908 333 aa7.49□□□□□ -1.21
SCFD1-210ENST00000553693 GSTP1P09211 210 aaKnown RBP7.49□□□□□ -1.21
SCFD1-210ENST00000553693 ASPAP45381 313 aa7.49□□□□□ -1.21
SCFD1-210ENST00000553693 CCDC86Q9H6F5 360 aaKnown RBP7.49□□□□□ -1.21
SCFD1-210ENST00000553693 FAM105AQ9NUU6 356 aa7.49□□□□□ -1.21
SCFD1-210ENST00000553693 PRKAG2Q9UGJ0 569 aa7.49□□□□□ -1.21
SCFD1-210ENST00000553693 PPM1HQ9ULR3 514 aa7.49□□□□□ -1.21
SCFD1-210ENST00000553693 LEMD3Q9Y2U8 911 aa7.49□□□□□ -1.21
SCFD1-210ENST00000553693 SLFN14P0C7P3 912 aa7.48□□□□□ -1.21
SCFD1-210ENST00000553693 ZAR1Q86SH2 424 aa7.48□□□□□ -1.21
SCFD1-210ENST00000553693 DTX1Q86Y01 620 aa7.48□□□□□ -1.21
SCFD1-210ENST00000553693 SULF2Q8IWU5 870 aa7.48□□□□□ -1.21
SCFD1-210ENST00000553693 TBC1D32Q96NH3 1257 aa7.48□□□□□ -1.21
SCFD1-210ENST00000553693 ATXN3LQ9H3M9 355 aa7.48□□□□□ -1.21
SCFD1-210ENST00000553693 GSX1Q9H4S2 264 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-210ENST00000553693 ACSS3Q9H6R3 686 aa7.48□□□□□ -1.21
SCFD1-210ENST00000553693 SPG7Q9UQ90 795 aa7.48□□□□□ -1.21
SCFD1-210ENST00000553693 KRTAP9-7A8MTY7 169 aa7.47□□□□□ -1.21
SCFD1-210ENST00000553693 F13BP05160 661 aa7.47□□□□□ -1.21
SCFD1-210ENST00000553693 NFICP08651 508 aa7.47□□□□□ -1.21
SCFD1-210ENST00000553693 ID3Q02535 119 aa7.47□□□□□ -1.21
SCFD1-210ENST00000553693 POU5F2Q8N7G0 328 aa7.47□□□□□ -1.21
SCFD1-210ENST00000553693 EMILIN2Q9BXX0 1053 aa7.47□□□□□ -1.21
SCFD1-210ENST00000553693 CEP44Q9C0F1 390 aa7.47□□□□□ -1.21
SCFD1-210ENST00000553693 SEMA6CQ9H3T2 930 aa7.47□□□□□ -1.21
SCFD1-210ENST00000553693 PIDD1Q9HB75 910 aa7.47□□□□□ -1.21
SCFD1-210ENST00000553693 FOSL1P15407 271 aa7.46□□□□□ -1.22
SCFD1-210ENST00000553693 LIG1P18858 919 aa7.46□□□□□ -1.22
SCFD1-210ENST00000553693 NME2P22392 152 aa7.46□□□□□ -1.22
SCFD1-210ENST00000553693 CYP27A1Q02318 531 aa7.46□□□□□ -1.22
SCFD1-210ENST00000553693 KIF4BQ2VIQ3 1234 aa7.46□□□□□ -1.22
SCFD1-210ENST00000553693 KRTAP5-3Q6L8H2 238 aa7.46□□□□□ -1.22
SCFD1-210ENST00000553693 C3orf58Q8NDZ4 430 aa7.46□□□□□ -1.22
SCFD1-210ENST00000553693 KCNB2Q92953 911 aa7.46□□□□□ -1.22
SCFD1-210ENST00000553693 ZC3H12CQ9C0D7 883 aaKnown RBP7.46□□□□□ -1.22
SCFD1-210ENST00000553693 PPP1R9AQ9ULJ8 1098 aa7.46□□□□□ -1.22
SCFD1-210ENST00000553693 SAMM50Q9Y512 469 aa7.46□□□□□ -1.22
SCFD1-210ENST00000553693 TMPRSS2O15393 492 aa7.45□□□□□ -1.22
SCFD1-210ENST00000553693 P4HBP07237 508 aaKnown RBP7.45□□□□□ -1.22
SCFD1-210ENST00000553693 ARNTP27540 789 aa7.45□□□□□ -1.22
SCFD1-210ENST00000553693 FGD1P98174 961 aa7.45□□□□□ -1.22
SCFD1-210ENST00000553693 DUSP27Q5VZP5 1158 aa7.45□□□□□ -1.22
SCFD1-210ENST00000553693 PDZD3Q86UT5 571 aa7.45□□□□□ -1.22
SCFD1-210ENST00000553693 FRMD6Q96NE9 622 aa7.45□□□□□ -1.22
SCFD1-210ENST00000553693 CRIM1Q9NZV1 1036 aa7.45□□□□□ -1.22
SCFD1-210ENST00000553693 DAGLAQ9Y4D2 1042 aa7.45□□□□□ -1.22
SCFD1-210ENST00000553693 ZNF862O60290 1169 aa7.44□□□□□ -1.22
SCFD1-210ENST00000553693 WNT11O96014 354 aa7.44□□□□□ -1.22
SCFD1-210ENST00000553693 LDHBP07195 334 aaKnown RBP7.44□□□□□ -1.22
SCFD1-210ENST00000553693 PDIA4P13667 645 aaKnown RBP7.44□□□□□ -1.22
SCFD1-210ENST00000553693 ADMP35318 185 aa7.44□□□□□ -1.22
SCFD1-210ENST00000553693 LCE5AQ5TCM9 118 aa7.44□□□□□ -1.22
SCFD1-210ENST00000553693 SND1Q7KZF4 910 aaKnown RBP eCLIP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms