RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 CEP44Q9C0F1 390 aa11.66□□□□□ -0.54
PCNX1-205ENST00000553508 PPM1HQ9ULR3 514 aa11.66□□□□□ -0.54
PCNX1-205ENST00000553508 ENC1O14682 589 aa11.65□□□□□ -0.54
PCNX1-205ENST00000553508 ERCC3P19447 782 aa11.65□□□□□ -0.54
PCNX1-205ENST00000553508 FSTP19883 344 aa11.65□□□□□ -0.54
PCNX1-205ENST00000553508 NME2P22392 152 aa11.65□□□□□ -0.54
PCNX1-205ENST00000553508 MAP1SQ66K74 1059 aaPredicted RBP11.65□□□□□ -0.54
PCNX1-205ENST00000553508 FBLIM1Q8WUP2 373 aa11.65□□□□□ -0.54
PCNX1-205ENST00000553508 C7orf69Q9H7B7 122 aa11.65□□□□□ -0.54
PCNX1-205ENST00000553508 CELA3AP09093 270 aa11.64□□□□□ -0.55
PCNX1-205ENST00000553508 MAP4P27816 1152 aaKnown RBP11.64□□□□□ -0.55
PCNX1-205ENST00000553508 CDPF1Q6NVV7 123 aa11.64□□□□□ -0.55
PCNX1-205ENST00000553508 PDZD3Q86UT5 571 aa11.64□□□□□ -0.55
PCNX1-205ENST00000553508 CLEC10AQ8IUN9 316 aa11.64□□□□□ -0.55
PCNX1-205ENST00000553508 ACTL7BQ9Y614 415 aa11.64□□□□□ -0.55
PCNX1-205ENST00000553508 ZNF862O60290 1169 aa11.63□□□□□ -0.55
PCNX1-205ENST00000553508 GRIN3AQ8TCU5 1115 aa11.63□□□□□ -0.55
PCNX1-205ENST00000553508 EMILIN2Q9BXX0 1053 aa11.63□□□□□ -0.55
PCNX1-205ENST00000553508 HIF3AQ9Y2N7 669 aa11.63□□□□□ -0.55
PCNX1-205ENST00000553508 RAB6AP20340 208 aa11.62□□□□□ -0.55
PCNX1-205ENST00000553508 BMP6P22004 513 aa11.62□□□□□ -0.55
PCNX1-205ENST00000553508 DAB2P98082 770 aa11.62□□□□□ -0.55
PCNX1-205ENST00000553508 NFKBIBQ15653 356 aa11.62□□□□□ -0.55
PCNX1-205ENST00000553508 MPRIPQ6WCQ1 1025 aa11.62□□□□□ -0.55
PCNX1-205ENST00000553508 PPP1R9AQ9ULJ8 1098 aa11.62□□□□□ -0.55
PCNX1-205ENST00000553508 SLFN14P0C7P3 912 aa11.61□□□□□ -0.55
PCNX1-205ENST00000553508 ASPAP45381 313 aa11.61□□□□□ -0.55
PCNX1-205ENST00000553508 TRIM26Q12899 539 aaPredicted RBP11.61□□□□□ -0.55
PCNX1-205ENST00000553508 ZMYM1Q5SVZ6 1142 aa11.61□□□□□ -0.55
PCNX1-205ENST00000553508 FAM83CQ9BQN1 747 aa11.61□□□□□ -0.55
PCNX1-205ENST00000553508 SAMM50Q9Y512 469 aa11.61□□□□□ -0.55
PCNX1-205ENST00000553508 IGLV1-40P01703 118 aa11.6□□□□□ -0.55
PCNX1-205ENST00000553508 ACSBG1Q96GR2 724 aa11.6□□□□□ -0.55
PCNX1-205ENST00000553508 BCL2L13Q9BXK5 485 aa11.6□□□□□ -0.55
PCNX1-205ENST00000553508 KRT82Q9NSB4 513 aa11.6□□□□□ -0.55
PCNX1-205ENST00000553508 FAM105AQ9NUU6 356 aa11.6□□□□□ -0.55
PCNX1-205ENST00000553508 MEI1Q5TIA1 1274 aa11.59□□□□□ -0.55
PCNX1-205ENST00000553508 GPBAR1Q8TDU6 330 aa11.59□□□□□ -0.55
PCNX1-205ENST00000553508 FAM95CA0A1B0GW59 222 aa11.58□□□□□ -0.56
PCNX1-205ENST00000553508 TMPRSS2O15393 492 aa11.58□□□□□ -0.56
PCNX1-205ENST00000553508 MFAP1P55081 439 aaKnown RBP11.58□□□□□ -0.56
PCNX1-205ENST00000553508 NFIAQ12857 509 aa11.58□□□□□ -0.56
PCNX1-205ENST00000553508 RASIP1Q5U651 963 aa11.58□□□□□ -0.56
PCNX1-205ENST00000553508 PCNX4Q63HM2 1172 aa11.58□□□□□ -0.56
PCNX1-205ENST00000553508 TMC4Q7Z404 712 aa11.58□□□□□ -0.56
PCNX1-205ENST00000553508 GIPC2Q8TF65 315 aa11.58□□□□□ -0.56
PCNX1-205ENST00000553508 YIPF2Q9BWQ6 316 aa11.58□□□□□ -0.56
PCNX1-205ENST00000553508 LGR6Q9HBX8 967 aa11.58□□□□□ -0.56
PCNX1-205ENST00000553508 MRS2Q9HD23 443 aa11.58□□□□□ -0.56
PCNX1-205ENST00000553508 NFICP08651 508 aa11.57□□□□□ -0.56
PCNX1-205ENST00000553508 ZNF252P-AS1Q0IIN9 211 aa11.57□□□□□ -0.56
PCNX1-205ENST00000553508 CCDC85BQ15834 202 aaPredicted RBP11.57□□□□□ -0.56
PCNX1-205ENST00000553508 MAP3K11Q16584 847 aa11.57□□□□□ -0.56
PCNX1-205ENST00000553508 KIF4BQ2VIQ3 1234 aa11.57□□□□□ -0.56
PCNX1-205ENST00000553508 RNF43Q68DV7 783 aa11.57□□□□□ -0.56
PCNX1-205ENST00000553508 SORBS3O60504 671 aa11.56□□□□□ -0.56
PCNX1-205ENST00000553508 HNRNPUQ00839 825 aaKnown RBP eCLIP11.56□□□□□ -0.56
PCNX1-205ENST00000553508 ID3Q02535 119 aa11.56□□□□□ -0.56
PCNX1-205ENST00000553508 LLGL2Q6P1M3 1020 aa11.56□□□□□ -0.56
PCNX1-205ENST00000553508 PAOXQ6QHF9 649 aa11.56□□□□□ -0.56
PCNX1-205ENST00000553508 SV2BQ7L1I2 683 aa11.56□□□□□ -0.56
PCNX1-205ENST00000553508 ANKRD24Q8TF21 1146 aa11.56□□□□□ -0.56
PCNX1-205ENST00000553508 MFSD14AQ96MC6 490 aa11.56□□□□□ -0.56
PCNX1-205ENST00000553508 CRIM1Q9NZV1 1036 aa11.56□□□□□ -0.56
PCNX1-205ENST00000553508 VTI1BQ9UEU0 232 aa11.56□□□□□ -0.56
PCNX1-205ENST00000553508 GSC2O15499 205 aa11.55□□□□□ -0.56
PCNX1-205ENST00000553508 LRRC14Q15048 493 aa11.55□□□□□ -0.56
PCNX1-205ENST00000553508 FBXL6Q8N531 539 aa11.55□□□□□ -0.56
PCNX1-205ENST00000553508 FANCD2OSQ96PS1 177 aa11.55□□□□□ -0.56
PCNX1-205ENST00000553508 DAGLAQ9Y4D2 1042 aa11.55□□□□□ -0.56
PCNX1-205ENST00000553508 CSADQ9Y600 493 aa11.55□□□□□ -0.56
PCNX1-205ENST00000553508 CTSHP09668 335 aa11.54□□□□□ -0.56
PCNX1-205ENST00000553508 DBNDD2Q9BQY9 259 aa11.54□□□□□ -0.56
PCNX1-205ENST00000553508 PIDD1Q9HB75 910 aa11.54□□□□□ -0.56
PCNX1-205ENST00000553508 PCDHGC5Q9Y5F6 944 aa11.54□□□□□ -0.56
PCNX1-205ENST00000553508 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.53□□□□□ -0.56
PCNX1-205ENST00000553508 SCO2A0A1W2PP80 73 aa11.53□□□□□ -0.56
PCNX1-205ENST00000553508 ZNF326Q5BKZ1 582 aaKnown RBP11.53□□□□□ -0.56
PCNX1-205ENST00000553508 TTBK2Q6IQ55 1244 aa11.53□□□□□ -0.56
PCNX1-205ENST00000553508 ATXN3LQ9H3M9 355 aa11.53□□□□□ -0.56
PCNX1-205ENST00000553508 SEMA6CQ9H3T2 930 aa11.53□□□□□ -0.56
PCNX1-205ENST00000553508 DISC1Q9NRI5 854 aa11.53□□□□□ -0.56
PCNX1-205ENST00000553508 SYNGAP1Q96PV0 1343 aa11.53□□□□□ -0.56
PCNX1-205ENST00000553508 WDR64B1ANS9 1081 aa11.52□□□□□ -0.57
PCNX1-205ENST00000553508 RNGTTO60942 597 aaKnown RBP11.52□□□□□ -0.57
PCNX1-205ENST00000553508 TAF1CQ15572 869 aaPredicted RBP11.52□□□□□ -0.57
PCNX1-205ENST00000553508 SHISA5Q8N114 240 aa11.52□□□□□ -0.57
PCNX1-205ENST00000553508 SHKBP1Q8TBC3 707 aa11.52□□□□□ -0.57
PCNX1-205ENST00000553508 EZH1Q92800 747 aaPredicted RBP11.52□□□□□ -0.57
PCNX1-205ENST00000553508 GSX1Q9H4S2 264 aaPredicted RBP11.52□□□□□ -0.57
PCNX1-205ENST00000553508 ACSS3Q9H6R3 686 aa11.52□□□□□ -0.57
PCNX1-205ENST00000553508 PCDHA4Q9UN74 947 aa11.52□□□□□ -0.57
PCNX1-205ENST00000553508 CYP8B1Q9UNU6 501 aa11.52□□□□□ -0.57
PCNX1-205ENST00000553508 DCDC2CA8MYV0 355 aa11.51□□□□□ -0.57
PCNX1-205ENST00000553508 TRIM37O94972 964 aa11.51□□□□□ -0.57
PCNX1-205ENST00000553508 HCLS1P14317 486 aaPredicted RBP11.51□□□□□ -0.57
PCNX1-205ENST00000553508 MAP7Q14244 749 aa11.51□□□□□ -0.57
PCNX1-205ENST00000553508 TTLL4Q14679 1199 aa11.51□□□□□ -0.57
PCNX1-205ENST00000553508 SLC51AQ86UW1 340 aa11.51□□□□□ -0.57
PCNX1-205ENST00000553508 TBC1D32Q96NH3 1257 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms