RNA–Protein interactions for RNA: ENST00000548946.1

UBE2N-202, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3

Gene UBE2N, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-202ENST00000548946 TMEM39AQ9NV64 488 aa8.27□□□□□ -1.09
UBE2N-202ENST00000548946 GPN3Q9UHW5 284 aaPredicted RBP8.27□□□□□ -1.09
UBE2N-202ENST00000548946 NFICP08651 508 aa8.26□□□□□ -1.09
UBE2N-202ENST00000548946 SLFN14P0C7P3 912 aa8.26□□□□□ -1.09
UBE2N-202ENST00000548946 SPINK2P20155 84 aa8.26□□□□□ -1.09
UBE2N-202ENST00000548946 RAB6AP20340 208 aa8.26□□□□□ -1.09
UBE2N-202ENST00000548946 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.26□□□□□ -1.09
UBE2N-202ENST00000548946 PI16Q6UXB8 463 aa8.26□□□□□ -1.09
UBE2N-202ENST00000548946 TBC1D32Q96NH3 1257 aa8.26□□□□□ -1.09
UBE2N-202ENST00000548946 WDR18Q9BV38 432 aa8.26□□□□□ -1.09
UBE2N-202ENST00000548946 DTX1Q86Y01 620 aa8.25□□□□□ -1.09
UBE2N-202ENST00000548946 GSX1Q9H4S2 264 aaPredicted RBP8.25□□□□□ -1.09
UBE2N-202ENST00000548946 ACSS3Q9H6R3 686 aa8.25□□□□□ -1.09
UBE2N-202ENST00000548946 FAM105AQ9NUU6 356 aa8.25□□□□□ -1.09
UBE2N-202ENST00000548946 PRKAG2Q9UGJ0 569 aa8.25□□□□□ -1.09
UBE2N-202ENST00000548946 AKAP2Q9Y2D5 859 aa8.25□□□□□ -1.09
UBE2N-202ENST00000548946 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.24□□□□□ -1.09
UBE2N-202ENST00000548946 PATL2C9JE40 543 aaKnown RBP8.24□□□□□ -1.09
UBE2N-202ENST00000548946 GSTP1P09211 210 aaKnown RBP8.24□□□□□ -1.09
UBE2N-202ENST00000548946 LIG1P18858 919 aa8.24□□□□□ -1.09
UBE2N-202ENST00000548946 NXPE4Q6UWF7 544 aa8.24□□□□□ -1.09
UBE2N-202ENST00000548946 ZAR1Q86SH2 424 aa8.24□□□□□ -1.09
UBE2N-202ENST00000548946 FBF1Q8TES7 1133 aa8.24□□□□□ -1.09
UBE2N-202ENST00000548946 KRTAP9-2Q9BYQ4 174 aa8.24□□□□□ -1.09
UBE2N-202ENST00000548946 ZC3H12CQ9C0D7 883 aaKnown RBP8.24□□□□□ -1.09
UBE2N-202ENST00000548946 SEMA6CQ9H3T2 930 aa8.24□□□□□ -1.09
UBE2N-202ENST00000548946 KRT82Q9NSB4 513 aa8.24□□□□□ -1.09
UBE2N-202ENST00000548946 WNT11O96014 354 aa8.23□□□□□ -1.09
UBE2N-202ENST00000548946 FOSL1P15407 271 aa8.23□□□□□ -1.09
UBE2N-202ENST00000548946 MAPK8P45983 427 aa8.23□□□□□ -1.09
UBE2N-202ENST00000548946 CYP27A1Q02318 531 aa8.23□□□□□ -1.09
UBE2N-202ENST00000548946 DUSP27Q5VZP5 1158 aa8.23□□□□□ -1.09
UBE2N-202ENST00000548946 ASB16Q96NS5 453 aa8.23□□□□□ -1.09
UBE2N-202ENST00000548946 PSMG3-AS1Q96PY0 264 aa8.23□□□□□ -1.09
UBE2N-202ENST00000548946 CCDC86Q9H6F5 360 aaKnown RBP8.23□□□□□ -1.09
UBE2N-202ENST00000548946 ZEB1P37275 1124 aaPredicted RBP8.22□□□□□ -1.09
UBE2N-202ENST00000548946 GP2P55259 537 aaKnown RBP8.22□□□□□ -1.09
UBE2N-202ENST00000548946 TRAIPQ9BWF2 469 aa8.22□□□□□ -1.09
UBE2N-202ENST00000548946 SRCIN1Q9C0H9 1055 aa8.22□□□□□ -1.09
UBE2N-202ENST00000548946 PPP1R9AQ9ULJ8 1098 aa8.22□□□□□ -1.09
UBE2N-202ENST00000548946 DAGLAQ9Y4D2 1042 aa8.22□□□□□ -1.09
UBE2N-202ENST00000548946 CYP26A1O43174 497 aa8.21□□□□□ -1.1
UBE2N-202ENST00000548946 HOXA10P31260 410 aaPredicted RBP8.21□□□□□ -1.1
UBE2N-202ENST00000548946 ADMP35318 185 aa8.21□□□□□ -1.1
UBE2N-202ENST00000548946 FMR1Q06787 632 aaKnown RBP eCLIP8.21□□□□□ -1.1
UBE2N-202ENST00000548946 ALG1LQ6GMV1 187 aa8.21□□□□□ -1.1
UBE2N-202ENST00000548946 KCNB2Q92953 911 aa8.21□□□□□ -1.1
UBE2N-202ENST00000548946 ATXN3LQ9H3M9 355 aa8.21□□□□□ -1.1
UBE2N-202ENST00000548946 PIDD1Q9HB75 910 aa8.21□□□□□ -1.1
UBE2N-202ENST00000548946 GIPC1O14908 333 aa8.2□□□□□ -1.1
UBE2N-202ENST00000548946 TMPRSS2O15393 492 aa8.2□□□□□ -1.1
UBE2N-202ENST00000548946 GSTT1P30711 240 aa8.2□□□□□ -1.1
UBE2N-202ENST00000548946 ATP2B2Q01814 1243 aa8.2□□□□□ -1.1
UBE2N-202ENST00000548946 ID3Q02535 119 aa8.2□□□□□ -1.1
UBE2N-202ENST00000548946 KIF4BQ2VIQ3 1234 aa8.2□□□□□ -1.1
UBE2N-202ENST00000548946 SULF2Q8IWU5 870 aa8.2□□□□□ -1.1
UBE2N-202ENST00000548946 SHISA5Q8N114 240 aa8.2□□□□□ -1.1
UBE2N-202ENST00000548946 WDR89Q96FK6 387 aaPredicted RBP8.2□□□□□ -1.1
UBE2N-202ENST00000548946 EMILIN2Q9BXX0 1053 aa8.2□□□□□ -1.1
UBE2N-202ENST00000548946 CRIM1Q9NZV1 1036 aa8.2□□□□□ -1.1
UBE2N-202ENST00000548946 KRTAP9-6A0A140TA67 174 aa8.19□□□□□ -1.1
UBE2N-202ENST00000548946 FAM170BA6NMN3 283 aa8.19□□□□□ -1.1
UBE2N-202ENST00000548946 ZNF862O60290 1169 aa8.19□□□□□ -1.1
UBE2N-202ENST00000548946 ARNTP27540 789 aa8.19□□□□□ -1.1
UBE2N-202ENST00000548946 IRAK1P51617 712 aa8.19□□□□□ -1.1
UBE2N-202ENST00000548946 GATA6Q92908 595 aa8.19□□□□□ -1.1
UBE2N-202ENST00000548946 FANCD2OSQ96PS1 177 aa8.19□□□□□ -1.1
UBE2N-202ENST00000548946 ANGEL1Q9UNK9 670 aaKnown RBP8.19□□□□□ -1.1
UBE2N-202ENST00000548946 NME2P22392 152 aa8.18□□□□□ -1.1
UBE2N-202ENST00000548946 MSMPQ1L6U9 139 aa8.18□□□□□ -1.1
UBE2N-202ENST00000548946 SEZ6L2Q6UXD5 910 aa8.18□□□□□ -1.1
UBE2N-202ENST00000548946 PDZD3Q86UT5 571 aa8.18□□□□□ -1.1
UBE2N-202ENST00000548946 CEP44Q9C0F1 390 aa8.18□□□□□ -1.1
UBE2N-202ENST00000548946 SPG7Q9UQ90 795 aa8.18□□□□□ -1.1
UBE2N-202ENST00000548946 SAMM50Q9Y512 469 aa8.18□□□□□ -1.1
UBE2N-202ENST00000548946 OAS3Q9Y6K5 1087 aaKnown RBP8.18□□□□□ -1.1
UBE2N-202ENST00000548946 MCTP1Q6DN14 999 aa8.17□□□□□ -1.1
UBE2N-202ENST00000548946 C3orf58Q8NDZ4 430 aa8.17□□□□□ -1.1
UBE2N-202ENST00000548946 LGR6Q9HBX8 967 aa8.17□□□□□ -1.1
UBE2N-202ENST00000548946 C1GALT1Q9NS00 363 aa8.17□□□□□ -1.1
UBE2N-202ENST00000548946 PPM1HQ9ULR3 514 aa8.17□□□□□ -1.1
UBE2N-202ENST00000548946 ADAMTS4O75173 837 aa8.16□□□□□ -1.1
UBE2N-202ENST00000548946 MAP1SQ66K74 1059 aaPredicted RBP8.16□□□□□ -1.1
UBE2N-202ENST00000548946 OGFOD3Q6PK18 319 aa8.16□□□□□ -1.1
UBE2N-202ENST00000548946 ZNF765Q7L2R6 523 aa8.16□□□□□ -1.1
UBE2N-202ENST00000548946 SMYD4Q8IYR2 804 aaPredicted RBP8.16□□□□□ -1.1
UBE2N-202ENST00000548946 NECAB3Q96P71 396 aaPredicted RBP8.16□□□□□ -1.1
UBE2N-202ENST00000548946 CBX8Q9HC52 389 aa8.16□□□□□ -1.1
UBE2N-202ENST00000548946 DISC1Q9NRI5 854 aa8.16□□□□□ -1.1
UBE2N-202ENST00000548946 COL17A1Q9UMD9 1497 aaPredicted RBP8.16□□□□□ -1.1
UBE2N-202ENST00000548946 DYNC1LI2O43237 492 aaPredicted RBP8.15□□□□□ -1.1
UBE2N-202ENST00000548946 RNGTTO60942 597 aaKnown RBP8.15□□□□□ -1.1
UBE2N-202ENST00000548946 CYP27C1Q4G0S4 372 aa8.15□□□□□ -1.1
UBE2N-202ENST00000548946 TPTE2Q6XPS3 522 aa8.15□□□□□ -1.1
UBE2N-202ENST00000548946 STK35Q8TDR2 534 aa8.15□□□□□ -1.1
UBE2N-202ENST00000548946 OSBPL7Q9BZF2 842 aa8.15□□□□□ -1.1
UBE2N-202ENST00000548946 LRRC4CQ9HCJ2 640 aa8.15□□□□□ -1.1
UBE2N-202ENST00000548946 BSDC1Q9NW68 430 aaPredicted RBP8.15□□□□□ -1.1
UBE2N-202ENST00000548946 WWC3Q9ULE0 1092 aa8.15□□□□□ -1.1
UBE2N-202ENST00000548946 PCDHGC5Q9Y5F6 944 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms