RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 TRDNQ13061 729 aa16.32■□□□□ 0.2
RAPGEF3-218ENST00000548919 PTPAQ15257 358 aa16.32■□□□□ 0.2
RAPGEF3-218ENST00000548919 LONRF3Q496Y0 759 aa16.32■□□□□ 0.2
RAPGEF3-218ENST00000548919 SLC9C2Q5TAH2 1124 aa16.32■□□□□ 0.2
RAPGEF3-218ENST00000548919 FOXP4Q8IVH2 680 aaPredicted RBP16.32■□□□□ 0.2
RAPGEF3-218ENST00000548919 UTP14AQ9BVJ6 771 aaKnown RBP16.32■□□□□ 0.2
RAPGEF3-218ENST00000548919 FANCLQ9NW38 375 aa16.32■□□□□ 0.2
RAPGEF3-218ENST00000548919 FAM53CQ9NYF3 392 aa16.32■□□□□ 0.2
RAPGEF3-218ENST00000548919 TUBE1Q9UJT0 475 aa16.32■□□□□ 0.2
RAPGEF3-218ENST00000548919 HPSEQ9Y251 543 aa16.32■□□□□ 0.2
RAPGEF3-218ENST00000548919 METTL16Q86W50 562 aaKnown RBP16.32■□□□□ 0.2
RAPGEF3-218ENST00000548919 ZNF142P52746 1687 aaPredicted RBP16.32■□□□□ 0.2
RAPGEF3-218ENST00000548919 MST1RQ04912 1400 aa16.31■□□□□ 0.2
RAPGEF3-218ENST00000548919 ADAMTSL3P82987 1691 aa16.31■□□□□ 0.2
RAPGEF3-218ENST00000548919 DDX60Q8IY21 1712 aaKnown RBP16.31■□□□□ 0.2
RAPGEF3-218ENST00000548919 NRDCO43847 1150 aa16.31■□□□□ 0.2
RAPGEF3-218ENST00000548919 H2AFXP16104 143 aaPredicted RBP16.31■□□□□ 0.2
RAPGEF3-218ENST00000548919 ETF1P62495 437 aaKnown RBP16.31■□□□□ 0.2
RAPGEF3-218ENST00000548919 MYL5Q02045 173 aa16.31■□□□□ 0.2
RAPGEF3-218ENST00000548919 ARHGAP29Q52LW3 1261 aa16.31■□□□□ 0.2
RAPGEF3-218ENST00000548919 FAM177A1Q8N128 213 aaPredicted RBP16.31■□□□□ 0.2
RAPGEF3-218ENST00000548919 MAP3K14Q99558 947 aa16.31■□□□□ 0.2
RAPGEF3-218ENST00000548919 ISCA1Q9BUE6 129 aa16.31■□□□□ 0.2
RAPGEF3-218ENST00000548919 IDH1O75874 414 aaKnown RBP16.31■□□□□ 0.2
RAPGEF3-218ENST00000548919 ATF3P18847 181 aa16.31■□□□□ 0.2
RAPGEF3-218ENST00000548919 CLCN6P51797 869 aa16.31■□□□□ 0.2
RAPGEF3-218ENST00000548919 IFIT5Q13325 482 aaKnown RBP16.31■□□□□ 0.2
RAPGEF3-218ENST00000548919 METTL24Q5JXM2 366 aa16.31■□□□□ 0.2
RAPGEF3-218ENST00000548919 APOA5Q6Q788 366 aa16.31■□□□□ 0.2
RAPGEF3-218ENST00000548919 ZCRB1Q8TBF4 217 aaKnown RBP16.31■□□□□ 0.2
RAPGEF3-218ENST00000548919 SH2B2O14492 632 aaPredicted RBP16.3■□□□□ 0.2
RAPGEF3-218ENST00000548919 PDE4BQ07343 736 aa16.3■□□□□ 0.2
RAPGEF3-218ENST00000548919 TCIRG1Q13488 830 aa16.3■□□□□ 0.2
RAPGEF3-218ENST00000548919 TRIM65Q6PJ69 517 aa16.3■□□□□ 0.2
RAPGEF3-218ENST00000548919 MYO5AQ9Y4I1 1855 aaKnown RBP16.3■□□□□ 0.2
RAPGEF3-218ENST00000548919 RANBP6O60518 1105 aaKnown RBP16.3■□□□□ 0.2
RAPGEF3-218ENST00000548919 BMP6P22004 513 aa16.3■□□□□ 0.2
RAPGEF3-218ENST00000548919 TIGD1Q96MW7 591 aa16.3■□□□□ 0.2
RAPGEF3-218ENST00000548919 TMX1Q9H3N1 280 aa16.3■□□□□ 0.2
RAPGEF3-218ENST00000548919 PIH1D3Q9NQM4 214 aaKnown RBP16.3■□□□□ 0.2
RAPGEF3-218ENST00000548919 MYH7P12883 1935 aa16.3■□□□□ 0.2
RAPGEF3-218ENST00000548919 KCPQ6ZWJ8 1503 aa16.3■□□□□ 0.2
RAPGEF3-218ENST00000548919 KCNJ6P48051 423 aa16.29■□□□□ 0.2
RAPGEF3-218ENST00000548919 NFXL1Q6ZNB6 911 aa16.29■□□□□ 0.2
RAPGEF3-218ENST00000548919 STK11IPQ8N1F8 1099 aa16.29■□□□□ 0.2
RAPGEF3-218ENST00000548919 INTS13Q9NVM9 706 aa16.29■□□□□ 0.2
RAPGEF3-218ENST00000548919 PCDHA5Q9Y5H7 936 aa16.29■□□□□ 0.2
RAPGEF3-218ENST00000548919 PPP6R2O75170 966 aa16.29■□□□□ 0.2
RAPGEF3-218ENST00000548919 ADD2P35612 726 aa16.29■□□□□ 0.2
RAPGEF3-218ENST00000548919 RESP18Q5W5W9 173 aa16.29■□□□□ 0.2
RAPGEF3-218ENST00000548919 PCDH11XQ9BZA7 1347 aa16.28■□□□□ 0.2
RAPGEF3-218ENST00000548919 PCDH11YQ9BZA8 1340 aa16.28■□□□□ 0.2
RAPGEF3-218ENST00000548919 URI1O94763 535 aaPredicted RBP16.28■□□□□ 0.2
RAPGEF3-218ENST00000548919 GPTP24298 496 aa16.28■□□□□ 0.2
RAPGEF3-218ENST00000548919 LDHAL6AQ6ZMR3 332 aa16.28■□□□□ 0.2
RAPGEF3-218ENST00000548919 TOM1L2Q6ZVM7 507 aa16.28■□□□□ 0.2
RAPGEF3-218ENST00000548919 VSTM4Q8IW00 320 aa16.28■□□□□ 0.2
RAPGEF3-218ENST00000548919 CNNM3Q8NE01 707 aa16.28■□□□□ 0.2
RAPGEF3-218ENST00000548919 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.28■□□□□ 0.2
RAPGEF3-218ENST00000548919 KCNH3Q9ULD8 1083 aa16.28■□□□□ 0.2
RAPGEF3-218ENST00000548919 FHOD1Q9Y613 1164 aa16.28■□□□□ 0.2
RAPGEF3-218ENST00000548919 RIC1Q4ADV7 1423 aa16.28■□□□□ 0.2
RAPGEF3-218ENST00000548919 UBN2Q6ZU65 1347 aa16.28■□□□□ 0.2
RAPGEF3-218ENST00000548919 TOP1P11387 765 aaKnown RBP16.28■□□□□ 0.2
RAPGEF3-218ENST00000548919 GRIN1Q05586 938 aa16.28■□□□□ 0.2
RAPGEF3-218ENST00000548919 REXO1L1PQ8IX06 675 aa16.28■□□□□ 0.2
RAPGEF3-218ENST00000548919 EPC1Q9H2F5 836 aa16.28■□□□□ 0.2
RAPGEF3-218ENST00000548919 GREM2Q9H772 168 aa16.28■□□□□ 0.2
RAPGEF3-218ENST00000548919 WDR19Q8NEZ3 1342 aa16.27■□□□□ 0.2
RAPGEF3-218ENST00000548919 ZNF532Q9HCE3 1301 aa16.27■□□□□ 0.2
RAPGEF3-218ENST00000548919 ZBTB43O43298 467 aa16.27■□□□□ 0.2
RAPGEF3-218ENST00000548919 IARSP41252 1262 aaKnown RBP16.27■□□□□ 0.2
RAPGEF3-218ENST00000548919 NTRK3Q16288 839 aa16.27■□□□□ 0.2
RAPGEF3-218ENST00000548919 OLFM4Q6UX06 510 aa16.27■□□□□ 0.2
RAPGEF3-218ENST00000548919 JMYQ8N9B5 988 aa16.27■□□□□ 0.2
RAPGEF3-218ENST00000548919 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.27■□□□□ 0.2
RAPGEF3-218ENST00000548919 SLC26A6Q9BXS9 759 aa16.27■□□□□ 0.2
RAPGEF3-218ENST00000548919 FAM217BQ9NTX9 383 aaPredicted RBP16.27■□□□□ 0.2
RAPGEF3-218ENST00000548919 AKAP11Q9UKA4 1901 aa16.27■□□□□ 0.2
RAPGEF3-218ENST00000548919 CDKL5O76039 1030 aa16.27■□□□□ 0.2
RAPGEF3-218ENST00000548919 KRBA2Q6ZNG9 492 aa16.27■□□□□ 0.2
RAPGEF3-218ENST00000548919 WWC3Q9ULE0 1092 aa16.27■□□□□ 0.2
RAPGEF3-218ENST00000548919 RIPOR2Q9Y4F9 1068 aa16.27■□□□□ 0.2
RAPGEF3-218ENST00000548919 ECM29Q5VYK3 1845 aa16.27■□□□□ 0.19
RAPGEF3-218ENST00000548919 UBR2Q8IWV8 1755 aa16.27■□□□□ 0.19
RAPGEF3-218ENST00000548919 ERICH4A6NGS2 130 aa16.26■□□□□ 0.19
RAPGEF3-218ENST00000548919 GOLGA8AA7E2F4 631 aa16.26■□□□□ 0.19
RAPGEF3-218ENST00000548919 ERVV-2B6SEH9 535 aa16.26■□□□□ 0.19
RAPGEF3-218ENST00000548919 CBFA2T2O43439 604 aa16.26■□□□□ 0.19
RAPGEF3-218ENST00000548919 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
RAPGEF3-218ENST00000548919 ITGA6P23229 1130 aa16.26■□□□□ 0.19
RAPGEF3-218ENST00000548919 GUCY1A2P33402 732 aa16.26■□□□□ 0.19
RAPGEF3-218ENST00000548919 ZNF827Q17R98 1081 aa16.26■□□□□ 0.19
RAPGEF3-218ENST00000548919 CCDC102BQ68D86 513 aa16.26■□□□□ 0.19
RAPGEF3-218ENST00000548919 PDILTQ8N807 584 aa16.26■□□□□ 0.19
RAPGEF3-218ENST00000548919 IGDCC4Q8TDY8 1250 aa16.26■□□□□ 0.19
RAPGEF3-218ENST00000548919 CARD6Q9BX69 1037 aa16.26■□□□□ 0.19
RAPGEF3-218ENST00000548919 LY9Q9HBG7 655 aa16.26■□□□□ 0.19
RAPGEF3-218ENST00000548919 PHLPP2Q6ZVD8 1323 aa16.26■□□□□ 0.19
RAPGEF3-218ENST00000548919 CSF1RP07333 972 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms