RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 FAM205AQ6ZU69 1335 aa15.83■□□□□ 0.12
PTCH1-215ENST00000547672 COL4A1P02462 1669 aa15.83■□□□□ 0.12
PTCH1-215ENST00000547672 MYO5AQ9Y4I1 1855 aaKnown RBP15.82■□□□□ 0.12
PTCH1-215ENST00000547672 ERICH2A1L162 156 aa15.82■□□□□ 0.12
PTCH1-215ENST00000547672 STX6O43752 255 aa15.82■□□□□ 0.12
PTCH1-215ENST00000547672 BAG4O95429 457 aaKnown RBP15.82■□□□□ 0.12
PTCH1-215ENST00000547672 KLRK1P26718 216 aa15.82■□□□□ 0.12
PTCH1-215ENST00000547672 GJB2P29033 226 aa15.82■□□□□ 0.12
PTCH1-215ENST00000547672 PPP4CP60510 307 aa15.82■□□□□ 0.12
PTCH1-215ENST00000547672 TXNRD3Q86VQ6 643 aa15.82■□□□□ 0.12
PTCH1-215ENST00000547672 MB21D2Q8IYB1 491 aaPredicted RBP15.82■□□□□ 0.12
PTCH1-215ENST00000547672 MIGA1Q8NAN2 632 aa15.82■□□□□ 0.12
PTCH1-215ENST00000547672 GTF3C6Q969F1 213 aa15.82■□□□□ 0.12
PTCH1-215ENST00000547672 FAM163AQ96GL9 167 aaPredicted RBP15.82■□□□□ 0.12
PTCH1-215ENST00000547672 RIOK1Q9BRS2 568 aaKnown RBP15.82■□□□□ 0.12
PTCH1-215ENST00000547672 POLLQ9UGP5 575 aa15.82■□□□□ 0.12
PTCH1-215ENST00000547672 TAF6LQ9Y6J9 622 aa15.82■□□□□ 0.12
PTCH1-215ENST00000547672 WTIPA6NIX2 430 aaPredicted RBP15.81■□□□□ 0.12
PTCH1-215ENST00000547672 ZSCAN22P10073 491 aaPredicted RBP15.81■□□□□ 0.12
PTCH1-215ENST00000547672 LARP1BQ659C4 914 aaKnown RBP15.81■□□□□ 0.12
PTCH1-215ENST00000547672 MSL1Q68DK7 614 aa15.81■□□□□ 0.12
PTCH1-215ENST00000547672 FAM184AQ8NB25 1140 aa15.81■□□□□ 0.12
PTCH1-215ENST00000547672 ESR2Q92731 530 aa15.81■□□□□ 0.12
PTCH1-215ENST00000547672 ZNF287Q9HBT7 754 aa15.81■□□□□ 0.12
PTCH1-215ENST00000547672 ANGEL1Q9UNK9 670 aaKnown RBP15.81■□□□□ 0.12
PTCH1-215ENST00000547672 LRRC37AA6NMS7 1700 aa15.8■□□□□ 0.12
PTCH1-215ENST00000547672 CDKL5O76039 1030 aa15.8■□□□□ 0.12
PTCH1-215ENST00000547672 NCLP19338 710 aaKnown RBP15.8■□□□□ 0.12
PTCH1-215ENST00000547672 LIFRP42702 1097 aa15.8■□□□□ 0.12
PTCH1-215ENST00000547672 PPARAQ07869 468 aa15.8■□□□□ 0.12
PTCH1-215ENST00000547672 PPP2R5BQ15173 497 aa15.8■□□□□ 0.12
PTCH1-215ENST00000547672 SBK1Q52WX2 424 aa15.8■□□□□ 0.12
PTCH1-215ENST00000547672 PODNQ7Z5L7 613 aa15.8■□□□□ 0.12
PTCH1-215ENST00000547672 UPF1Q92900 1129 aaKnown RBP eCLIP15.8■□□□□ 0.12
PTCH1-215ENST00000547672 ARPP21Q9UBL0 812 aaPredicted RBP15.8■□□□□ 0.12
PTCH1-215ENST00000547672 ANKRD31Q8N7Z5 1873 aa15.8■□□□□ 0.12
PTCH1-215ENST00000547672 COL1A1P02452 1464 aaPredicted RBP15.79■□□□□ 0.12
PTCH1-215ENST00000547672 SYT1P21579 422 aa15.79■□□□□ 0.12
PTCH1-215ENST00000547672 PDIA3P30101 505 aaKnown RBP15.79■□□□□ 0.12
PTCH1-215ENST00000547672 RCAN1P53805 252 aa15.79■□□□□ 0.12
PTCH1-215ENST00000547672 CCDC178Q5BJE1 867 aa15.79■□□□□ 0.12
PTCH1-215ENST00000547672 NECAB1Q8N987 351 aa15.79■□□□□ 0.12
PTCH1-215ENST00000547672 TCEANC2Q96MN5 208 aa15.79■□□□□ 0.12
PTCH1-215ENST00000547672 LARP6Q9BRS8 491 aaKnown RBP15.79■□□□□ 0.12
PTCH1-215ENST00000547672 ANO8Q9HCE9 1232 aaPredicted RBP15.79■□□□□ 0.12
PTCH1-215ENST00000547672 MAST2Q6P0Q8 1798 aa15.79■□□□□ 0.12
PTCH1-215ENST00000547672 LAMA4Q16363 1823 aa15.78■□□□□ 0.12
PTCH1-215ENST00000547672 CPLX1O14810 134 aa15.78■□□□□ 0.12
PTCH1-215ENST00000547672 PRDX5P30044 214 aa15.78■□□□□ 0.12
PTCH1-215ENST00000547672 FKBP1AP62942 108 aaKnown RBP15.78■□□□□ 0.12
PTCH1-215ENST00000547672 PDE4BQ07343 736 aa15.78■□□□□ 0.12
PTCH1-215ENST00000547672 APOBRQ0VD83 1088 aa15.78■□□□□ 0.12
PTCH1-215ENST00000547672 SOGA3Q5TF21 947 aa15.78■□□□□ 0.12
PTCH1-215ENST00000547672 VPS33BQ9H267 617 aa15.78■□□□□ 0.12
PTCH1-215ENST00000547672 EPB41L4AQ9HCS5 686 aaPredicted RBP15.78■□□□□ 0.12
PTCH1-215ENST00000547672 NAP1L2Q9ULW6 460 aaPredicted RBP15.78■□□□□ 0.12
PTCH1-215ENST00000547672 CACNA1SQ13698 1873 aa15.78■□□□□ 0.12
PTCH1-215ENST00000547672 CCDC196A0A1B0GTZ2 297 aa15.77■□□□□ 0.12
PTCH1-215ENST00000547672 CCDC69A6NI79 296 aa15.77■□□□□ 0.12
PTCH1-215ENST00000547672 MINDY4BA8MYZ0 360 aa15.77■□□□□ 0.12
PTCH1-215ENST00000547672 PRKAB2O43741 272 aa15.77■□□□□ 0.12
PTCH1-215ENST00000547672 TRAK2O60296 914 aa15.77■□□□□ 0.12
PTCH1-215ENST00000547672 LARGE1O95461 756 aa15.77■□□□□ 0.12
PTCH1-215ENST00000547672 USP5P45974 858 aa15.77■□□□□ 0.12
PTCH1-215ENST00000547672 STK3Q13188 491 aa15.77■□□□□ 0.12
PTCH1-215ENST00000547672 TMEM67Q5HYA8 995 aa15.77■□□□□ 0.12
PTCH1-215ENST00000547672 MFSD14BQ5SR56 506 aa15.77■□□□□ 0.12
PTCH1-215ENST00000547672 NFXL1Q6ZNB6 911 aa15.77■□□□□ 0.12
PTCH1-215ENST00000547672 IQCA1Q86XH1 822 aa15.77■□□□□ 0.12
PTCH1-215ENST00000547672 RTKN2Q8IZC4 609 aa15.77■□□□□ 0.12
PTCH1-215ENST00000547672 UBAC1Q9BSL1 405 aa15.77■□□□□ 0.12
PTCH1-215ENST00000547672 MRIQ9BWK5 157 aa15.77■□□□□ 0.12
PTCH1-215ENST00000547672 RTFDC1Q9BY42 306 aaPredicted RBP15.77■□□□□ 0.12
PTCH1-215ENST00000547672 TOMM22Q9NS69 142 aa15.77■□□□□ 0.12
PTCH1-215ENST00000547672 AATFQ9NY61 560 aaKnown RBP eCLIP15.77■□□□□ 0.12
PTCH1-215ENST00000547672 KIAA1551Q9HCM1 1747 aa15.77■□□□□ 0.11
PTCH1-215ENST00000547672 MROH7-TTC4A0A0A0MT08 1334 aa15.76■□□□□ 0.11
PTCH1-215ENST00000547672 GPR75-ASB3A0A0A6YYF3 556 aa15.76■□□□□ 0.11
PTCH1-215ENST00000547672 KLF18A0A0U1RQI7 1052 aa15.76■□□□□ 0.11
PTCH1-215ENST00000547672 B4E1Z4 1266 aa15.76■□□□□ 0.11
PTCH1-215ENST00000547672 H3BQV1 296 aa15.76■□□□□ 0.11
PTCH1-215ENST00000547672 IFIT3O14879 490 aaKnown RBP15.76■□□□□ 0.11
PTCH1-215ENST00000547672 FGRP09769 529 aa15.76■□□□□ 0.11
PTCH1-215ENST00000547672 POLD1P28340 1107 aa15.76■□□□□ 0.11
PTCH1-215ENST00000547672 IFFO2Q5TF58 517 aa15.76■□□□□ 0.11
PTCH1-215ENST00000547672 ADGRA1Q86SQ6 560 aa15.76■□□□□ 0.11
PTCH1-215ENST00000547672 SGMS1Q86VZ5 419 aa15.76■□□□□ 0.11
PTCH1-215ENST00000547672 TBC1D10CQ8IV04 446 aa15.76■□□□□ 0.11
PTCH1-215ENST00000547672 SMARCC2Q8TAQ2 1214 aa15.76■□□□□ 0.11
PTCH1-215ENST00000547672 LRRC2Q9BYS8 371 aa15.76■□□□□ 0.11
PTCH1-215ENST00000547672 ZSCAN16Q9H4T2 348 aaPredicted RBP15.76■□□□□ 0.11
PTCH1-215ENST00000547672 ZSWIM5Q9P217 1185 aa15.76■□□□□ 0.11
PTCH1-215ENST00000547672 ZDHHC9Q9Y397 364 aa15.76■□□□□ 0.11
PTCH1-215ENST00000547672 SH2B2O14492 632 aaPredicted RBP15.75■□□□□ 0.11
PTCH1-215ENST00000547672 RIMBP2O15034 1052 aa15.75■□□□□ 0.11
PTCH1-215ENST00000547672 ORC4O43929 436 aa15.75■□□□□ 0.11
PTCH1-215ENST00000547672 DYNLL1P63167 89 aaKnown RBP15.75■□□□□ 0.11
PTCH1-215ENST00000547672 CTDSPL2Q05D32 466 aa15.75■□□□□ 0.11
PTCH1-215ENST00000547672 SCRN1Q12765 414 aa15.75■□□□□ 0.11
PTCH1-215ENST00000547672 MCTP1Q6DN14 999 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms