RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 TRPM7Q96QT4 1865 aa24.85■■□□□ 1.57
HMGA2-211ENST00000545998 GPR75-ASB3A0A0A6YYF3 556 aa24.85■■□□□ 1.57
HMGA2-211ENST00000545998 ADM5C9JUS6 153 aa24.85■■□□□ 1.57
HMGA2-211ENST00000545998 TMED8Q6PL24 325 aaPredicted RBP24.85■■□□□ 1.57
HMGA2-211ENST00000545998 TRAF5O00463 557 aa24.84■■□□□ 1.57
HMGA2-211ENST00000545998 CDC42EP5Q6NZY7 148 aa24.84■■□□□ 1.57
HMGA2-211ENST00000545998 ADGRA1Q86SQ6 560 aa24.84■■□□□ 1.57
HMGA2-211ENST00000545998 MAGEB6Q8N7X4 407 aa24.84■■□□□ 1.57
HMGA2-211ENST00000545998 VEZTQ9HBM0 779 aa24.84■■□□□ 1.57
HMGA2-211ENST00000545998 PPP4R2Q9NY27 417 aa24.84■■□□□ 1.57
HMGA2-211ENST00000545998 MAP4K4O95819 1239 aaPredicted RBP24.84■■□□□ 1.57
HMGA2-211ENST00000545998 BTDP43251 543 aa24.84■■□□□ 1.57
HMGA2-211ENST00000545998 DLK2Q6UY11 383 aa24.84■■□□□ 1.57
HMGA2-211ENST00000545998 PDE6AP16499 860 aa24.83■■□□□ 1.57
HMGA2-211ENST00000545998 CYP7A1P22680 504 aa24.83■■□□□ 1.57
HMGA2-211ENST00000545998 FMR1Q06787 632 aaKnown RBP eCLIP24.83■■□□□ 1.57
HMGA2-211ENST00000545998 SLC9C2Q5TAH2 1124 aa24.83■■□□□ 1.57
HMGA2-211ENST00000545998 USP40Q9NVE5 1235 aa24.83■■□□□ 1.57
HMGA2-211ENST00000545998 KBTBD3Q8NAB2 608 aa24.82■■□□□ 1.56
HMGA2-211ENST00000545998 TCRBV5S4A2TA0A5A2 114 aa24.81■■□□□ 1.56
HMGA2-211ENST00000545998 CACNB3P54284 484 aa24.81■■□□□ 1.56
HMGA2-211ENST00000545998 RHBDL3P58872 404 aa24.81■■□□□ 1.56
HMGA2-211ENST00000545998 FKBP1CQ5VVH2 108 aa24.81■■□□□ 1.56
HMGA2-211ENST00000545998 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.81■■□□□ 1.56
HMGA2-211ENST00000545998 DEFB129Q9H1M3 183 aa24.81■■□□□ 1.56
HMGA2-211ENST00000545998 CEP350Q5VT06 3117 aa24.8■■□□□ 1.56
HMGA2-211ENST00000545998 TNFAIP1Q13829 316 aa24.8■■□□□ 1.56
HMGA2-211ENST00000545998 TMOD2Q9NZR1 351 aa24.8■■□□□ 1.56
HMGA2-211ENST00000545998 TCP10L2B9ZVM9 353 aa24.8■■□□□ 1.56
HMGA2-211ENST00000545998 ADD2P35612 726 aa24.8■■□□□ 1.56
HMGA2-211ENST00000545998 PPP4CP60510 307 aa24.8■■□□□ 1.56
HMGA2-211ENST00000545998 AATFQ9NY61 560 aaKnown RBP eCLIP24.8■■□□□ 1.56
HMGA2-211ENST00000545998 ZNF532Q9HCE3 1301 aa24.79■■□□□ 1.56
HMGA2-211ENST00000545998 CDK5RAP2Q96SN8 1893 aa24.79■■□□□ 1.56
HMGA2-211ENST00000545998 BAG3O95817 575 aa24.79■■□□□ 1.56
HMGA2-211ENST00000545998 RASA3Q14644 834 aa24.79■■□□□ 1.56
HMGA2-211ENST00000545998 CDCA5Q96FF9 252 aa24.79■■□□□ 1.56
HMGA2-211ENST00000545998 PPP2R3BQ9Y5P8 575 aa24.79■■□□□ 1.56
HMGA2-211ENST00000545998 CNTNAP1P78357 1384 aa24.79■■□□□ 1.56
HMGA2-211ENST00000545998 RFX7Q2KHR2 1363 aa24.79■■□□□ 1.56
HMGA2-211ENST00000545998 NFIAQ12857 509 aa24.78■■□□□ 1.56
HMGA2-211ENST00000545998 ZSCAN25Q6NSZ9 544 aa24.78■■□□□ 1.56
HMGA2-211ENST00000545998 NOL10Q9BSC4 688 aaKnown RBP24.78■■□□□ 1.56
HMGA2-211ENST00000545998 WDHD1O75717 1129 aaPredicted RBP24.77■■□□□ 1.56
HMGA2-211ENST00000545998 CHGBP05060 677 aa24.77■■□□□ 1.56
HMGA2-211ENST00000545998 UBE3CQ15386 1083 aa24.77■■□□□ 1.56
HMGA2-211ENST00000545998 SLFNL1Q499Z3 407 aa24.77■■□□□ 1.56
HMGA2-211ENST00000545998 FOCADQ5VW36 1801 aa24.77■■□□□ 1.56
HMGA2-211ENST00000545998 PRAMEF18Q5VWM3 479 aa24.77■■□□□ 1.56
HMGA2-211ENST00000545998 FAM83AQ86UY5 434 aa24.77■■□□□ 1.56
HMGA2-211ENST00000545998 IDI2Q9BXS1 227 aa24.77■■□□□ 1.56
HMGA2-211ENST00000545998 AK9Q5TCS8 1911 aa24.77■■□□□ 1.56
HMGA2-211ENST00000545998 TNNI2P48788 182 aa24.76■■□□□ 1.55
HMGA2-211ENST00000545998 APLP1P51693 650 aa24.76■■□□□ 1.55
HMGA2-211ENST00000545998 CST9Q5W186 159 aa24.76■■□□□ 1.55
HMGA2-211ENST00000545998 MIGA1Q8NAN2 632 aa24.76■■□□□ 1.55
HMGA2-211ENST00000545998 SH3RF3Q8TEJ3 882 aaPredicted RBP24.76■■□□□ 1.55
HMGA2-211ENST00000545998 EVI5LQ96CN4 794 aa24.76■■□□□ 1.55
HMGA2-211ENST00000545998 FAM198AQ9UFP1 575 aa24.76■■□□□ 1.55
HMGA2-211ENST00000545998 PLCG2P16885 1265 aa24.76■■□□□ 1.55
HMGA2-211ENST00000545998 DYNLL1P63167 89 aaKnown RBP24.76■■□□□ 1.55
HMGA2-211ENST00000545998 TMEM39BQ9GZU3 492 aa24.76■■□□□ 1.55
HMGA2-211ENST00000545998 CELF2O95319 508 aaKnown RBP24.75■■□□□ 1.55
HMGA2-211ENST00000545998 CERS3Q8IU89 383 aa24.75■■□□□ 1.55
HMGA2-211ENST00000545998 TEPSINQ96N21 525 aa24.75■■□□□ 1.55
HMGA2-211ENST00000545998 RIOK1Q9BRS2 568 aaKnown RBP24.75■■□□□ 1.55
HMGA2-211ENST00000545998 FSD1Q9BTV5 496 aa24.75■■□□□ 1.55
HMGA2-211ENST00000545998 RNF113AO15541 343 aaKnown RBP24.74■■□□□ 1.55
HMGA2-211ENST00000545998 ZFYP08048 801 aaPredicted RBP24.74■■□□□ 1.55
HMGA2-211ENST00000545998 HSPA6P17066 643 aa24.74■■□□□ 1.55
HMGA2-211ENST00000545998 RGS3P49796 1198 aa24.74■■□□□ 1.55
HMGA2-211ENST00000545998 TEX11Q8IYF3 940 aa24.74■■□□□ 1.55
HMGA2-211ENST00000545998 FAM151AQ8WW52 585 aa24.74■■□□□ 1.55
HMGA2-211ENST00000545998 ZNF408Q9H9D4 720 aa24.74■■□□□ 1.55
HMGA2-211ENST00000545998 DDX4Q9NQI0 724 aaKnown RBP24.74■■□□□ 1.55
HMGA2-211ENST00000545998 MAGEB6P1A0A0J9YX57 407 aa24.73■■□□□ 1.55
HMGA2-211ENST00000545998 TRIM6-TRIM34B2RNG4 842 aa24.73■■□□□ 1.55
HMGA2-211ENST00000545998 LRRFIP1Q32MZ4 808 aaKnown RBP24.73■■□□□ 1.55
HMGA2-211ENST00000545998 TMEM88BA6NKF7 163 aa24.72■■□□□ 1.55
HMGA2-211ENST00000545998 ENTPD3O75355 529 aa24.72■■□□□ 1.55
HMGA2-211ENST00000545998 NPM3O75607 178 aaKnown RBP24.72■■□□□ 1.55
HMGA2-211ENST00000545998 TCP10Q12799 353 aa24.72■■□□□ 1.55
HMGA2-211ENST00000545998 TTC22Q5TAA0 569 aa24.72■■□□□ 1.55
HMGA2-211ENST00000545998 SKAP1Q86WV1 359 aa24.72■■□□□ 1.55
HMGA2-211ENST00000545998 CDAN1Q8IWY9 1227 aa24.72■■□□□ 1.55
HMGA2-211ENST00000545998 RPAP1Q9BWH6 1393 aaPredicted RBP24.72■■□□□ 1.55
HMGA2-211ENST00000545998 NBPF12Q5TAG4 269 aaPredicted RBP24.71■■□□□ 1.55
HMGA2-211ENST00000545998 ZFPM1Q8IX07 1006 aa24.71■■□□□ 1.55
HMGA2-211ENST00000545998 SSC5DA1L4H1 1573 aa24.71■■□□□ 1.55
HMGA2-211ENST00000545998 GSPT1P15170 499 aaKnown RBP24.71■■□□□ 1.55
HMGA2-211ENST00000545998 PICALMQ13492 652 aa24.71■■□□□ 1.55
HMGA2-211ENST00000545998 TICAM2Q86XR7 235 aa24.71■■□□□ 1.55
HMGA2-211ENST00000545998 APPBP2Q92624 585 aa24.71■■□□□ 1.55
HMGA2-211ENST00000545998 RILPL2Q969X0 211 aa24.71■■□□□ 1.55
HMGA2-211ENST00000545998 PUS7LQ9H0K6 701 aaKnown RBP24.71■■□□□ 1.55
HMGA2-211ENST00000545998 SUPT20HL1Q3ZLR7 823 aa24.7■■□□□ 1.54
HMGA2-211ENST00000545998 LCORLQ8N3X6 602 aa24.7■■□□□ 1.54
HMGA2-211ENST00000545998 TGFBRAP1Q8WUH2 860 aa24.7■■□□□ 1.54
HMGA2-211ENST00000545998 CREBZFQ9NS37 354 aa24.7■■□□□ 1.54
HMGA2-211ENST00000545998 OSBP2Q969R2 916 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms