RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 COL14A1Q05707 1796 aaKnown RBP17.72■□□□□ 0.43
CNN3-207ENST00000545882 ARAP2Q8WZ64 1704 aa17.72■□□□□ 0.43
CNN3-207ENST00000545882 ITGA6P23229 1130 aa17.72■□□□□ 0.43
CNN3-207ENST00000545882 MARCKSP29966 332 aaPredicted RBP17.72■□□□□ 0.43
CNN3-207ENST00000545882 DMTNQ08495 405 aa17.72■□□□□ 0.43
CNN3-207ENST00000545882 KIF6Q6ZMV9 814 aa17.72■□□□□ 0.43
CNN3-207ENST00000545882 ASAP1Q9ULH1 1129 aa17.72■□□□□ 0.43
CNN3-207ENST00000545882 MAP3K15Q6ZN16 1313 aa17.71■□□□□ 0.43
CNN3-207ENST00000545882 RXRAP19793 462 aa17.71■□□□□ 0.43
CNN3-207ENST00000545882 PTPAQ15257 358 aa17.71■□□□□ 0.43
CNN3-207ENST00000545882 SLC9C2Q5TAH2 1124 aa17.71■□□□□ 0.43
CNN3-207ENST00000545882 E4F1Q66K89 784 aaPredicted RBP17.71■□□□□ 0.43
CNN3-207ENST00000545882 GIGYF2Q6Y7W6 1299 aaKnown RBP17.71■□□□□ 0.43
CNN3-207ENST00000545882 LDHAL6AQ6ZMR3 332 aa17.71■□□□□ 0.43
CNN3-207ENST00000545882 ALG1Q9BT22 464 aa17.71■□□□□ 0.43
CNN3-207ENST00000545882 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.71■□□□□ 0.43
CNN3-207ENST00000545882 HPSEQ9Y251 543 aa17.71■□□□□ 0.43
CNN3-207ENST00000545882 NTRK3Q16288 839 aa17.7■□□□□ 0.42
CNN3-207ENST00000545882 KRT40Q6A162 431 aa17.7■□□□□ 0.42
CNN3-207ENST00000545882 TMC6Q7Z403 805 aa17.7■□□□□ 0.42
CNN3-207ENST00000545882 NLRP10Q86W26 655 aa17.7■□□□□ 0.42
CNN3-207ENST00000545882 PIGBQ92521 554 aa17.7■□□□□ 0.42
CNN3-207ENST00000545882 TIGD1Q96MW7 591 aa17.7■□□□□ 0.42
CNN3-207ENST00000545882 TUBE1Q9UJT0 475 aa17.7■□□□□ 0.42
CNN3-207ENST00000545882 GPTP24298 496 aa17.7■□□□□ 0.42
CNN3-207ENST00000545882 UBE3CQ15386 1083 aa17.7■□□□□ 0.42
CNN3-207ENST00000545882 SHC4Q6S5L8 630 aa17.7■□□□□ 0.42
CNN3-207ENST00000545882 VPS37DQ86XT2 251 aa17.7■□□□□ 0.42
CNN3-207ENST00000545882 IGDCC4Q8TDY8 1250 aa17.7■□□□□ 0.42
CNN3-207ENST00000545882 MAP3K14Q99558 947 aa17.7■□□□□ 0.42
CNN3-207ENST00000545882 FAM217BQ9NTX9 383 aaPredicted RBP17.7■□□□□ 0.42
CNN3-207ENST00000545882 ZNF215Q9UL58 517 aaPredicted RBP17.7■□□□□ 0.42
CNN3-207ENST00000545882 WNK3Q9BYP7 1800 aa17.69■□□□□ 0.42
CNN3-207ENST00000545882 ZNF532Q9HCE3 1301 aa17.69■□□□□ 0.42
CNN3-207ENST00000545882 FAM237AA0A1B0GTK4 181 aa17.69■□□□□ 0.42
CNN3-207ENST00000545882 TCRBV5S4A2TA0A5A2 114 aa17.69■□□□□ 0.42
CNN3-207ENST00000545882 B4E1Z4 1266 aa17.69■□□□□ 0.42
CNN3-207ENST00000545882 SMC2O95347 1197 aa17.69■□□□□ 0.42
CNN3-207ENST00000545882 METAP2P50579 478 aaKnown RBP eCLIP17.69■□□□□ 0.42
CNN3-207ENST00000545882 UTP14CQ5TAP6 766 aaKnown RBP17.69■□□□□ 0.42
CNN3-207ENST00000545882 ISM2Q6H9L7 571 aa17.69■□□□□ 0.42
CNN3-207ENST00000545882 APOA5Q6Q788 366 aa17.69■□□□□ 0.42
CNN3-207ENST00000545882 PHKBQ93100 1093 aa17.69■□□□□ 0.42
CNN3-207ENST00000545882 TEX13AQ9BXU3 409 aaPredicted RBP17.69■□□□□ 0.42
CNN3-207ENST00000545882 WWC3Q9ULE0 1092 aa17.69■□□□□ 0.42
CNN3-207ENST00000545882 COL16A1Q07092 1604 aaPredicted RBP17.69■□□□□ 0.42
CNN3-207ENST00000545882 COL22A1Q8NFW1 1626 aaPredicted RBP17.69■□□□□ 0.42
CNN3-207ENST00000545882 PPP6R2O75170 966 aa17.68■□□□□ 0.42
CNN3-207ENST00000545882 CTSWP56202 376 aa17.68■□□□□ 0.42
CNN3-207ENST00000545882 TRDNQ13061 729 aa17.68■□□□□ 0.42
CNN3-207ENST00000545882 FEZ1Q99689 392 aa17.68■□□□□ 0.42
CNN3-207ENST00000545882 BCL11BQ9C0K0 894 aaPredicted RBP17.68■□□□□ 0.42
CNN3-207ENST00000545882 INCENPQ9NQS7 918 aa17.68■□□□□ 0.42
CNN3-207ENST00000545882 CGNQ9P2M7 1197 aaKnown RBP17.68■□□□□ 0.42
CNN3-207ENST00000545882 TACC3Q9Y6A5 838 aa17.68■□□□□ 0.42
CNN3-207ENST00000545882 UBE2Q2LH0YL09 131 aa17.68■□□□□ 0.42
CNN3-207ENST00000545882 BCL9O00512 1426 aa17.68■□□□□ 0.42
CNN3-207ENST00000545882 IKBKBO14920 756 aa17.68■□□□□ 0.42
CNN3-207ENST00000545882 RANBP6O60518 1105 aaKnown RBP17.68■□□□□ 0.42
CNN3-207ENST00000545882 PDE6AP16499 860 aa17.68■□□□□ 0.42
CNN3-207ENST00000545882 PHKA1P46020 1223 aa17.68■□□□□ 0.42
CNN3-207ENST00000545882 TTF1Q15361 905 aaPredicted RBP17.68■□□□□ 0.42
CNN3-207ENST00000545882 ZRSR1Q15695 479 aaKnown RBP17.68■□□□□ 0.42
CNN3-207ENST00000545882 CCDC150Q8NCX0 1101 aa17.68■□□□□ 0.42
CNN3-207ENST00000545882 CNNM1Q9NRU3 951 aa17.68■□□□□ 0.42
CNN3-207ENST00000545882 BTG4Q9NY30 223 aa17.68■□□□□ 0.42
CNN3-207ENST00000545882 LRP5O75197 1615 aa17.67■□□□□ 0.42
CNN3-207ENST00000545882 ANKRD18BA2A2Z9 1011 aa17.67■□□□□ 0.42
CNN3-207ENST00000545882 IDH1O75874 414 aaKnown RBP17.67■□□□□ 0.42
CNN3-207ENST00000545882 ATP1A3P13637 1013 aa17.67■□□□□ 0.42
CNN3-207ENST00000545882 ARID4AP29374 1257 aaPredicted RBP17.67■□□□□ 0.42
CNN3-207ENST00000545882 SYKP43405 635 aa17.67■□□□□ 0.42
CNN3-207ENST00000545882 FANCCQ00597 558 aa17.67■□□□□ 0.42
CNN3-207ENST00000545882 CCDC102BQ68D86 513 aa17.67■□□□□ 0.42
CNN3-207ENST00000545882 LY9Q9HBG7 655 aa17.67■□□□□ 0.42
CNN3-207ENST00000545882 PDE8BO95263 885 aa17.66■□□□□ 0.42
CNN3-207ENST00000545882 LMOD1P29536 600 aaPredicted RBP17.66■□□□□ 0.42
CNN3-207ENST00000545882 RESP18Q5W5W9 173 aa17.66■□□□□ 0.42
CNN3-207ENST00000545882 DPF2Q92785 391 aa17.66■□□□□ 0.42
CNN3-207ENST00000545882 PPP1R13BQ96KQ4 1090 aa17.66■□□□□ 0.42
CNN3-207ENST00000545882 CLIC6Q96NY7 704 aa17.66■□□□□ 0.42
CNN3-207ENST00000545882 STRBPQ96SI9 672 aaKnown RBP17.66■□□□□ 0.42
CNN3-207ENST00000545882 OGFRQ9NZT2 677 aa17.66■□□□□ 0.42
CNN3-207ENST00000545882 TIAM2Q8IVF5 1701 aa17.66■□□□□ 0.42
CNN3-207ENST00000545882 BCORQ6W2J9 1755 aa17.66■□□□□ 0.42
CNN3-207ENST00000545882 APPP05067 770 aa17.66■□□□□ 0.42
CNN3-207ENST00000545882 KCNJ6P48051 423 aa17.66■□□□□ 0.42
CNN3-207ENST00000545882 PNOCQ13519 176 aa17.66■□□□□ 0.42
CNN3-207ENST00000545882 SGMS1Q86VZ5 419 aa17.66■□□□□ 0.42
CNN3-207ENST00000545882 MICU3Q86XE3 530 aa17.66■□□□□ 0.42
CNN3-207ENST00000545882 TMEM87BQ96K49 555 aa17.66■□□□□ 0.42
CNN3-207ENST00000545882 SLC4A9Q96Q91 983 aa17.66■□□□□ 0.42
CNN3-207ENST00000545882 EPB41L4AQ9HCS5 686 aaPredicted RBP17.66■□□□□ 0.42
CNN3-207ENST00000545882 UBN2Q6ZU65 1347 aa17.65■□□□□ 0.42
CNN3-207ENST00000545882 SLIT2O94813 1529 aa17.65■□□□□ 0.42
CNN3-207ENST00000545882 PSDA5PKW4 1024 aaPredicted RBP17.65■□□□□ 0.42
CNN3-207ENST00000545882 IRS4O14654 1257 aaPredicted RBP17.65■□□□□ 0.42
CNN3-207ENST00000545882 CDKL5O76039 1030 aa17.65■□□□□ 0.42
CNN3-207ENST00000545882 ALX1Q15699 326 aa17.65■□□□□ 0.42
CNN3-207ENST00000545882 METTL16Q86W50 562 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms