RNA–Protein interactions for RNA: ENST00000543744.1

PTPN6-222, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best)

Gene PTPN6, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-222ENST00000543744 RXRAP19793 462 aa20.71■□□□□ 0.91
PTPN6-222ENST00000543744 CTDSPL2Q05D32 466 aa20.71■□□□□ 0.91
PTPN6-222ENST00000543744 STX1AQ16623 288 aa20.71■□□□□ 0.91
PTPN6-222ENST00000543744 SGMS1Q86VZ5 419 aa20.71■□□□□ 0.91
PTPN6-222ENST00000543744 MICU3Q86XE3 530 aa20.71■□□□□ 0.91
PTPN6-222ENST00000543744 ALG1Q9BT22 464 aa20.71■□□□□ 0.91
PTPN6-222ENST00000543744 LY9Q9HBG7 655 aa20.71■□□□□ 0.91
PTPN6-222ENST00000543744 SENP2Q9HC62 589 aa20.71■□□□□ 0.91
PTPN6-222ENST00000543744 INCENPQ9NQS7 918 aa20.71■□□□□ 0.91
PTPN6-222ENST00000543744 LRP2BPQ9P2M1 347 aa20.71■□□□□ 0.91
PTPN6-222ENST00000543744 DOCK2Q92608 1830 aa20.71■□□□□ 0.91
PTPN6-222ENST00000543744 PNPLA7Q6ZV29 1317 aa20.7■□□□□ 0.9
PTPN6-222ENST00000543744 NOLC1Q14978 699 aaKnown RBP eCLIP20.7■□□□□ 0.9
PTPN6-222ENST00000543744 C4AP0C0L4 1744 aa20.7■□□□□ 0.9
PTPN6-222ENST00000543744 C4BP0C0L5 1744 aa20.7■□□□□ 0.9
PTPN6-222ENST00000543744 KIF28PB7ZC32 967 aa20.7■□□□□ 0.9
PTPN6-222ENST00000543744 SPTLC2O15270 562 aa20.7■□□□□ 0.9
PTPN6-222ENST00000543744 CDC27P30260 824 aa20.7■□□□□ 0.9
PTPN6-222ENST00000543744 LIFRP42702 1097 aa20.7■□□□□ 0.9
PTPN6-222ENST00000543744 TDO2P48775 406 aa20.7■□□□□ 0.9
PTPN6-222ENST00000543744 AKNAD1Q5T1N1 836 aa20.7■□□□□ 0.9
PTPN6-222ENST00000543744 FMR1NBQ8N0W7 255 aaPredicted RBP20.7■□□□□ 0.9
PTPN6-222ENST00000543744 LCORLQ8N3X6 602 aa20.7■□□□□ 0.9
PTPN6-222ENST00000543744 KRT23Q9C075 422 aa20.7■□□□□ 0.9
PTPN6-222ENST00000543744 ZSWIM5Q9P217 1185 aa20.7■□□□□ 0.9
PTPN6-222ENST00000543744 SLC4A4Q9Y6R1 1079 aa20.7■□□□□ 0.9
PTPN6-222ENST00000543744 IFIT3O14879 490 aaKnown RBP20.69■□□□□ 0.9
PTPN6-222ENST00000543744 PRKAB2O43741 272 aa20.69■□□□□ 0.9
PTPN6-222ENST00000543744 MFSD6Q6ZSS7 791 aa20.69■□□□□ 0.9
PTPN6-222ENST00000543744 TRIM5Q9C035 493 aa20.69■□□□□ 0.9
PTPN6-222ENST00000543744 GOLGA8AA7E2F4 631 aa20.68■□□□□ 0.9
PTPN6-222ENST00000543744 CCDC144CPQ8IYA2 1237 aa20.68■□□□□ 0.9
PTPN6-222ENST00000543744 SLC12A7Q9Y666 1083 aa20.68■□□□□ 0.9
PTPN6-222ENST00000543744 LAMB2P55268 1798 aa20.68■□□□□ 0.9
PTPN6-222ENST00000543744 A0A1B0GVL5 298 aa20.68■□□□□ 0.9
PTPN6-222ENST00000543744 GOLGA6L19H0YKK7 550 aa20.68■□□□□ 0.9
PTPN6-222ENST00000543744 IARSP41252 1262 aaKnown RBP20.68■□□□□ 0.9
PTPN6-222ENST00000543744 ZNF75DP51815 510 aa20.68■□□□□ 0.9
PTPN6-222ENST00000543744 ERFEQ4G0M1 354 aa20.68■□□□□ 0.9
PTPN6-222ENST00000543744 ANO1Q5XXA6 986 aa20.68■□□□□ 0.9
PTPN6-222ENST00000543744 PLA2G4DQ86XP0 818 aa20.68■□□□□ 0.9
PTPN6-222ENST00000543744 ANKRD18AQ8IVF6 992 aa20.68■□□□□ 0.9
PTPN6-222ENST00000543744 PHKBQ93100 1093 aa20.68■□□□□ 0.9
PTPN6-222ENST00000543744 AIFM3Q96NN9 605 aa20.68■□□□□ 0.9
PTPN6-222ENST00000543744 CCDC69A6NI79 296 aa20.67■□□□□ 0.9
PTPN6-222ENST00000543744 NDUFA8P51970 172 aa20.67■□□□□ 0.9
PTPN6-222ENST00000543744 IQCB1Q15051 598 aa20.67■□□□□ 0.9
PTPN6-222ENST00000543744 KRT40Q6A162 431 aa20.67■□□□□ 0.9
PTPN6-222ENST00000543744 SDF4Q9BRK5 362 aa20.67■□□□□ 0.9
PTPN6-222ENST00000543744 GNL3LQ9NVN8 582 aaKnown RBP20.67■□□□□ 0.9
PTPN6-222ENST00000543744 ANO10Q9NW15 660 aa20.67■□□□□ 0.9
PTPN6-222ENST00000543744 NTRK3Q16288 839 aa20.66■□□□□ 0.9
PTPN6-222ENST00000543744 DNTTIP2Q5QJE6 756 aaKnown RBP20.66■□□□□ 0.9
PTPN6-222ENST00000543744 C11orf57Q6ZUT1 292 aaPredicted RBP20.66■□□□□ 0.9
PTPN6-222ENST00000543744 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.66■□□□□ 0.9
PTPN6-222ENST00000543744 DRC7Q8IY82 874 aa20.66■□□□□ 0.9
PTPN6-222ENST00000543744 MIGA1Q8NAN2 632 aa20.66■□□□□ 0.9
PTPN6-222ENST00000543744 LINC00116Q8NCU8 138 aa20.66■□□□□ 0.9
PTPN6-222ENST00000543744 STAG1Q8WVM7 1258 aa20.66■□□□□ 0.9
PTPN6-222ENST00000543744 MYL10Q9BUA6 226 aa20.66■□□□□ 0.9
PTPN6-222ENST00000543744 KCNF1Q9H3M0 494 aa20.66■□□□□ 0.9
PTPN6-222ENST00000543744 BCL9LQ86UU0 1499 aa20.66■□□□□ 0.9
PTPN6-222ENST00000543744 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.66■□□□□ 0.9
PTPN6-222ENST00000543744 SF3B3Q15393 1217 aaKnown RBP20.66■□□□□ 0.9
PTPN6-222ENST00000543744 TOMM22Q9NS69 142 aa20.66■□□□□ 0.9
PTPN6-222ENST00000543744 FAM217BQ9NTX9 383 aaPredicted RBP20.66■□□□□ 0.9
PTPN6-222ENST00000543744 IQSEC3Q9UPP2 1182 aaPredicted RBP20.66■□□□□ 0.9
PTPN6-222ENST00000543744 TACC3Q9Y6A5 838 aa20.66■□□□□ 0.9
PTPN6-222ENST00000543744 LTBP4Q8N2S1 1624 aa20.65■□□□□ 0.9
PTPN6-222ENST00000543744 CYP7A1P22680 504 aa20.65■□□□□ 0.9
PTPN6-222ENST00000543744 GNL2Q13823 731 aaKnown RBP20.65■□□□□ 0.9
PTPN6-222ENST00000543744 TRIM29Q14134 588 aa20.65■□□□□ 0.9
PTPN6-222ENST00000543744 SART3Q15020 963 aaKnown RBP20.65■□□□□ 0.9
PTPN6-222ENST00000543744 RRP12Q5JTH9 1297 aaKnown RBP20.65■□□□□ 0.9
PTPN6-222ENST00000543744 VPS37DQ86XT2 251 aa20.65■□□□□ 0.9
PTPN6-222ENST00000543744 SPTLC3Q9NUV7 552 aa20.65■□□□□ 0.9
PTPN6-222ENST00000543744 ZNF804BA4D1E1 1349 aa20.65■□□□□ 0.9
PTPN6-222ENST00000543744 FAM98CQ17RN3 349 aaKnown RBP20.65■□□□□ 0.9
PTPN6-222ENST00000543744 C17orf53Q8N3J3 647 aaPredicted RBP20.65■□□□□ 0.9
PTPN6-222ENST00000543744 BSDC1Q9NW68 430 aaPredicted RBP20.65■□□□□ 0.9
PTPN6-222ENST00000543744 ABCF2Q9UG63 623 aa20.65■□□□□ 0.9
PTPN6-222ENST00000543744 TIAM2Q8IVF5 1701 aa20.64■□□□□ 0.9
PTPN6-222ENST00000543744 RANBP6O60518 1105 aaKnown RBP20.64■□□□□ 0.89
PTPN6-222ENST00000543744 GYG1P46976 350 aa20.64■□□□□ 0.89
PTPN6-222ENST00000543744 SSRP1Q08945 709 aaKnown RBP20.64■□□□□ 0.89
PTPN6-222ENST00000543744 UBE4AQ14139 1066 aa20.64■□□□□ 0.89
PTPN6-222ENST00000543744 SLC39A14Q15043 492 aa20.64■□□□□ 0.89
PTPN6-222ENST00000543744 C3orf67Q6ZVT6 689 aa20.64■□□□□ 0.89
PTPN6-222ENST00000543744 KIAA1524Q8TCG1 905 aa20.64■□□□□ 0.89
PTPN6-222ENST00000543744 RNF41Q9H4P4 317 aaPredicted RBP20.64■□□□□ 0.89
PTPN6-222ENST00000543744 COL5A3P25940 1745 aaPredicted RBP20.63■□□□□ 0.89
PTPN6-222ENST00000543744 BECN2A8MW95 431 aa20.63■□□□□ 0.89
PTPN6-222ENST00000543744 PTGS1P23219 599 aa20.63■□□□□ 0.89
PTPN6-222ENST00000543744 GTF2E1P29083 439 aaPredicted RBP20.63■□□□□ 0.89
PTPN6-222ENST00000543744 CEP57L1Q8IYX8 460 aa20.63■□□□□ 0.89
PTPN6-222ENST00000543744 NAT10Q9H0A0 1025 aaKnown RBP20.63■□□□□ 0.89
PTPN6-222ENST00000543744 RAI14Q9P0K7 980 aa20.63■□□□□ 0.89
PTPN6-222ENST00000543744 TAOK2Q9UL54 1235 aa20.63■□□□□ 0.89
PTPN6-222ENST00000543744 STK36Q9NRP7 1315 aa20.63■□□□□ 0.89
PTPN6-222ENST00000543744 BCORQ6W2J9 1755 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms