RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 GLRX3O76003 335 aaKnown RBP12.07□□□□□ -0.48
VEGFB-204ENST00000543462 PDE6AP16499 860 aa12.07□□□□□ -0.48
VEGFB-204ENST00000543462 TTF1Q15361 905 aaPredicted RBP12.07□□□□□ -0.48
VEGFB-204ENST00000543462 B4GALNT3Q6L9W6 998 aa12.07□□□□□ -0.48
VEGFB-204ENST00000543462 CDC42EP5Q6NZY7 148 aa12.07□□□□□ -0.48
VEGFB-204ENST00000543462 DLK2Q6UY11 383 aa12.07□□□□□ -0.48
VEGFB-204ENST00000543462 CDC37L1Q7L3B6 337 aa12.07□□□□□ -0.48
VEGFB-204ENST00000543462 KRT26Q7Z3Y9 468 aa12.07□□□□□ -0.48
VEGFB-204ENST00000543462 TEPSINQ96N21 525 aa12.07□□□□□ -0.48
VEGFB-204ENST00000543462 TDRD3Q9H7E2 651 aaKnown RBP12.07□□□□□ -0.48
VEGFB-204ENST00000543462 PHIPQ8WWQ0 1821 aa12.07□□□□□ -0.48
VEGFB-204ENST00000543462 DOCK1Q14185 1865 aa12.06□□□□□ -0.48
VEGFB-204ENST00000543462 MYH8P13535 1937 aa12.06□□□□□ -0.48
VEGFB-204ENST00000543462 WDHD1O75717 1129 aaPredicted RBP12.06□□□□□ -0.48
VEGFB-204ENST00000543462 PPP4CP60510 307 aa12.06□□□□□ -0.48
VEGFB-204ENST00000543462 CST9Q5W186 159 aa12.06□□□□□ -0.48
VEGFB-204ENST00000543462 USP48Q86UV5 1035 aa12.06□□□□□ -0.48
VEGFB-204ENST00000543462 CDAN1Q8IWY9 1227 aa12.06□□□□□ -0.48
VEGFB-204ENST00000543462 DCPSQ96C86 337 aaKnown RBP12.06□□□□□ -0.48
VEGFB-204ENST00000543462 CDCA5Q96FF9 252 aa12.06□□□□□ -0.48
VEGFB-204ENST00000543462 GPATCH3Q96I76 525 aa12.06□□□□□ -0.48
VEGFB-204ENST00000543462 DNAJC2Q99543 621 aaKnown RBP12.06□□□□□ -0.48
VEGFB-204ENST00000543462 IDI2Q9BXS1 227 aa12.06□□□□□ -0.48
VEGFB-204ENST00000543462 RAI14Q9P0K7 980 aa12.06□□□□□ -0.48
VEGFB-204ENST00000543462 LRP2BPQ9P2M1 347 aa12.06□□□□□ -0.48
VEGFB-204ENST00000543462 FAM198AQ9UFP1 575 aa12.06□□□□□ -0.48
VEGFB-204ENST00000543462 SCAF8Q9UPN6 1271 aaKnown RBP12.06□□□□□ -0.48
VEGFB-204ENST00000543462 CLEC11AQ9Y240 323 aa12.06□□□□□ -0.48
VEGFB-204ENST00000543462 PPP2R3BQ9Y5P8 575 aa12.06□□□□□ -0.48
VEGFB-204ENST00000543462 LAMA4Q16363 1823 aa12.06□□□□□ -0.48
VEGFB-204ENST00000543462 PTPRFP10586 1907 aa12.05□□□□□ -0.48
VEGFB-204ENST00000543462 NPM3O75607 178 aaKnown RBP12.05□□□□□ -0.48
VEGFB-204ENST00000543462 IDH1O75874 414 aaKnown RBP12.05□□□□□ -0.48
VEGFB-204ENST00000543462 MAP4K4O95819 1239 aaPredicted RBP12.05□□□□□ -0.48
VEGFB-204ENST00000543462 CHGBP05060 677 aa12.05□□□□□ -0.48
VEGFB-204ENST00000543462 HSPA6P17066 643 aa12.05□□□□□ -0.48
VEGFB-204ENST00000543462 ADD2P35612 726 aa12.05□□□□□ -0.48
VEGFB-204ENST00000543462 BTDP43251 543 aa12.05□□□□□ -0.48
VEGFB-204ENST00000543462 APLP1P51693 650 aa12.05□□□□□ -0.48
VEGFB-204ENST00000543462 GSTO1P78417 241 aa12.05□□□□□ -0.48
VEGFB-204ENST00000543462 NFIAQ12857 509 aa12.05□□□□□ -0.48
VEGFB-204ENST00000543462 NAA16Q6N069 864 aaPredicted RBP12.05□□□□□ -0.48
VEGFB-204ENST00000543462 CENPQQ7L2Z9 268 aaPredicted RBP12.05□□□□□ -0.48
VEGFB-204ENST00000543462 FAM83AQ86UY5 434 aa12.05□□□□□ -0.48
VEGFB-204ENST00000543462 SULF1Q8IWU6 871 aa12.05□□□□□ -0.48
VEGFB-204ENST00000543462 SLF2Q8IX21 1173 aa12.05□□□□□ -0.48
VEGFB-204ENST00000543462 KBTBD3Q8NAB2 608 aa12.05□□□□□ -0.48
VEGFB-204ENST00000543462 RIOK1Q9BRS2 568 aaKnown RBP12.05□□□□□ -0.48
VEGFB-204ENST00000543462 CEP350Q5VT06 3117 aa12.05□□□□□ -0.48
VEGFB-204ENST00000543462 ERC2O15083 957 aa12.04□□□□□ -0.48
VEGFB-204ENST00000543462 MYO1BO43795 1136 aa12.04□□□□□ -0.48
VEGFB-204ENST00000543462 LDHCP07864 332 aa12.04□□□□□ -0.48
VEGFB-204ENST00000543462 RBM5P52756 815 aaKnown RBP eCLIP12.04□□□□□ -0.48
VEGFB-204ENST00000543462 CACNB3P54284 484 aa12.04□□□□□ -0.48
VEGFB-204ENST00000543462 MAP3K12Q12852 859 aa12.04□□□□□ -0.48
VEGFB-204ENST00000543462 MAGEB6Q8N7X4 407 aa12.04□□□□□ -0.48
VEGFB-204ENST00000543462 DEFB129Q9H1M3 183 aa12.04□□□□□ -0.48
VEGFB-204ENST00000543462 DDX4Q9NQI0 724 aaKnown RBP12.04□□□□□ -0.48
VEGFB-204ENST00000543462 NEFLP07196 543 aa12.03□□□□□ -0.48
VEGFB-204ENST00000543462 CYP7A1P22680 504 aa12.03□□□□□ -0.48
VEGFB-204ENST00000543462 TNFAIP1Q13829 316 aa12.03□□□□□ -0.48
VEGFB-204ENST00000543462 RASA3Q14644 834 aa12.03□□□□□ -0.48
VEGFB-204ENST00000543462 UBE3CQ15386 1083 aa12.03□□□□□ -0.48
VEGFB-204ENST00000543462 SLFNL1Q499Z3 407 aa12.03□□□□□ -0.48
VEGFB-204ENST00000543462 BCL11AQ9H165 835 aa12.03□□□□□ -0.48
VEGFB-204ENST00000543462 ZNF532Q9HCE3 1301 aa12.03□□□□□ -0.48
VEGFB-204ENST00000543462 GREB1LQ9C091 1923 aaPredicted RBP12.03□□□□□ -0.48
VEGFB-204ENST00000543462 ENTPD3O75355 529 aa12.02□□□□□ -0.49
VEGFB-204ENST00000543462 GSPT1P15170 499 aaKnown RBP12.02□□□□□ -0.49
VEGFB-204ENST00000543462 SLC9C2Q5TAH2 1124 aa12.02□□□□□ -0.49
VEGFB-204ENST00000543462 SH3BP5LQ7L8J4 393 aa12.02□□□□□ -0.49
VEGFB-204ENST00000543462 TICAM2Q86XR7 235 aa12.02□□□□□ -0.49
VEGFB-204ENST00000543462 SH3RF3Q8TEJ3 882 aaPredicted RBP12.02□□□□□ -0.49
VEGFB-204ENST00000543462 FAM151AQ8WW52 585 aa12.02□□□□□ -0.49
VEGFB-204ENST00000543462 TMEM39BQ9GZU3 492 aa12.02□□□□□ -0.49
VEGFB-204ENST00000543462 VEZTQ9HBM0 779 aa12.02□□□□□ -0.49
VEGFB-204ENST00000543462 CREBZFQ9NS37 354 aa12.02□□□□□ -0.49
VEGFB-204ENST00000543462 USP40Q9NVE5 1235 aa12.02□□□□□ -0.49
VEGFB-204ENST00000543462 AATFQ9NY61 560 aaKnown RBP eCLIP12.02□□□□□ -0.49
VEGFB-204ENST00000543462 MKRN1Q9UHC7 482 aaKnown RBP12.02□□□□□ -0.49
VEGFB-204ENST00000543462 TCP10L2B9ZVM9 353 aa12.01□□□□□ -0.49
VEGFB-204ENST00000543462 RGS3P49796 1198 aa12.01□□□□□ -0.49
VEGFB-204ENST00000543462 DYNLL1P63167 89 aaKnown RBP12.01□□□□□ -0.49
VEGFB-204ENST00000543462 MAP3K11Q16584 847 aa12.01□□□□□ -0.49
VEGFB-204ENST00000543462 PRAMEF18Q5VWM3 479 aa12.01□□□□□ -0.49
VEGFB-204ENST00000543462 ZFPM1Q8IX07 1006 aa12.01□□□□□ -0.49
VEGFB-204ENST00000543462 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.01□□□□□ -0.49
VEGFB-204ENST00000543462 ZBTB47Q9UFB7 747 aaPredicted RBP12.01□□□□□ -0.49
VEGFB-204ENST00000543462 TLL2Q9Y6L7 1015 aa12.01□□□□□ -0.49
VEGFB-204ENST00000543462 FLT1P17948 1338 aa12.01□□□□□ -0.49
VEGFB-204ENST00000543462 RASSF10A6NK89 507 aa12□□□□□ -0.49
VEGFB-204ENST00000543462 TMEM88BA6NKF7 163 aa12□□□□□ -0.49
VEGFB-204ENST00000543462 CELF2O95319 508 aaKnown RBP12□□□□□ -0.49
VEGFB-204ENST00000543462 PLCG2P16885 1265 aa12□□□□□ -0.49
VEGFB-204ENST00000543462 FKBP1BP68106 108 aa12□□□□□ -0.49
VEGFB-204ENST00000543462 MAP3K10Q02779 954 aa12□□□□□ -0.49
VEGFB-204ENST00000543462 ZMYM1Q5SVZ6 1142 aa12□□□□□ -0.49
VEGFB-204ENST00000543462 TTC22Q5TAA0 569 aa12□□□□□ -0.49
VEGFB-204ENST00000543462 NBPF12Q5TAG4 269 aaPredicted RBP12□□□□□ -0.49
VEGFB-204ENST00000543462 SAPCD2Q86UD0 394 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms