RNA–Protein interactions for RNA: ENST00000542484.1

C2CD3-218, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-218ENST00000542484 RELL1Q8IUW5 271 aa7.1□□□□□ -1.27
C2CD3-218ENST00000542484 GRIN3AQ8TCU5 1115 aa7.1□□□□□ -1.27
C2CD3-218ENST00000542484 GAL3ST3Q96A11 431 aa7.1□□□□□ -1.27
C2CD3-218ENST00000542484 RUSC1Q9BVN2 902 aa7.1□□□□□ -1.27
C2CD3-218ENST00000542484 RNF208Q9H0X6 261 aa7.1□□□□□ -1.27
C2CD3-218ENST00000542484 USP21Q9UK80 565 aa7.1□□□□□ -1.27
C2CD3-218ENST00000542484 TLR6Q9Y2C9 796 aa7.1□□□□□ -1.27
C2CD3-218ENST00000542484 TFE3P19532 575 aaPredicted RBP7.09□□□□□ -1.27
C2CD3-218ENST00000542484 GBP2P32456 591 aaPredicted RBP7.09□□□□□ -1.27
C2CD3-218ENST00000542484 RASSF7Q02833 373 aa7.09□□□□□ -1.27
C2CD3-218ENST00000542484 LMNB2Q03252 620 aa7.09□□□□□ -1.27
C2CD3-218ENST00000542484 PDE3AQ14432 1141 aa7.09□□□□□ -1.27
C2CD3-218ENST00000542484 MBTPS1Q14703 1052 aa7.09□□□□□ -1.27
C2CD3-218ENST00000542484 MAP1SQ66K74 1059 aaPredicted RBP7.09□□□□□ -1.27
C2CD3-218ENST00000542484 USP48Q86UV5 1035 aa7.09□□□□□ -1.27
C2CD3-218ENST00000542484 TRIM42Q8IWZ5 723 aa7.09□□□□□ -1.27
C2CD3-218ENST00000542484 KCNB2Q92953 911 aa7.09□□□□□ -1.27
C2CD3-218ENST00000542484 AKTIPQ9H8T0 292 aa7.09□□□□□ -1.27
C2CD3-218ENST00000542484 SUGCTQ9HAC7 445 aa7.09□□□□□ -1.27
C2CD3-218ENST00000542484 F6X3S4 739 aa7.08□□□□□ -1.28
C2CD3-218ENST00000542484 ZNF862O60290 1169 aa7.08□□□□□ -1.28
C2CD3-218ENST00000542484 CHRNA4P43681 627 aa7.08□□□□□ -1.28
C2CD3-218ENST00000542484 RAD51AP2Q09MP3 1159 aa7.08□□□□□ -1.28
C2CD3-218ENST00000542484 KIF4BQ2VIQ3 1234 aa7.08□□□□□ -1.28
C2CD3-218ENST00000542484 ZNF394Q53GI3 561 aa7.08□□□□□ -1.28
C2CD3-218ENST00000542484 CCDC84Q86UT8 332 aaPredicted RBP7.08□□□□□ -1.28
C2CD3-218ENST00000542484 SMG8Q8ND04 991 aaKnown RBP7.08□□□□□ -1.28
C2CD3-218ENST00000542484 WDR18Q9BV38 432 aa7.08□□□□□ -1.28
C2CD3-218ENST00000542484 ZC3H12CQ9C0D7 883 aaKnown RBP7.08□□□□□ -1.28
C2CD3-218ENST00000542484 KCNQ5Q9NR82 932 aa7.08□□□□□ -1.28
C2CD3-218ENST00000542484 DDX41Q9UJV9 622 aaKnown RBP7.08□□□□□ -1.28
C2CD3-218ENST00000542484 PF4P02776 101 aa7.07□□□□□ -1.28
C2CD3-218ENST00000542484 LMNB1P20700 586 aa7.07□□□□□ -1.28
C2CD3-218ENST00000542484 CAMK2GQ13555 558 aaPredicted RBP7.07□□□□□ -1.28
C2CD3-218ENST00000542484 C9orf131Q5VYM1 1079 aa7.07□□□□□ -1.28
C2CD3-218ENST00000542484 ANKRD34AQ69YU3 496 aa7.07□□□□□ -1.28
C2CD3-218ENST00000542484 MPRIPQ6WCQ1 1025 aa7.07□□□□□ -1.28
C2CD3-218ENST00000542484 CD163Q86VB7 1156 aa7.07□□□□□ -1.28
C2CD3-218ENST00000542484 AGGF1Q8N302 714 aaeCLIP7.07□□□□□ -1.28
C2CD3-218ENST00000542484 GPBAR1Q8TDU6 330 aa7.07□□□□□ -1.28
C2CD3-218ENST00000542484 TGIF2Q9GZN2 237 aa7.07□□□□□ -1.28
C2CD3-218ENST00000542484 MIR1-1HGQ9H1L0 117 aa7.07□□□□□ -1.28
C2CD3-218ENST00000542484 CYP4F12Q9HCS2 524 aa7.07□□□□□ -1.28
C2CD3-218ENST00000542484 PCDHB5Q9Y5E4 795 aa7.07□□□□□ -1.28
C2CD3-218ENST00000542484 PCDHGC5Q9Y5F6 944 aa7.07□□□□□ -1.28
C2CD3-218ENST00000542484 PCDHGB7Q9Y5F8 929 aa7.07□□□□□ -1.28
C2CD3-218ENST00000542484 AOC2O75106 756 aa7.06□□□□□ -1.28
C2CD3-218ENST00000542484 ALX3O95076 343 aa7.06□□□□□ -1.28
C2CD3-218ENST00000542484 TIAF1O95411 115 aa7.06□□□□□ -1.28
C2CD3-218ENST00000542484 GARTP22102 1010 aa7.06□□□□□ -1.28
C2CD3-218ENST00000542484 NOS3P29474 1203 aa7.06□□□□□ -1.28
C2CD3-218ENST00000542484 RACK1P63244 317 aaKnown RBP7.06□□□□□ -1.28
C2CD3-218ENST00000542484 NUTM2GQ5VZR2 741 aa7.06□□□□□ -1.28
C2CD3-218ENST00000542484 TXNRD3Q86VQ6 643 aa7.06□□□□□ -1.28
C2CD3-218ENST00000542484 ZNF654Q8IZM8 581 aa7.06□□□□□ -1.28
C2CD3-218ENST00000542484 WFDC12Q8WWY7 111 aa7.06□□□□□ -1.28
C2CD3-218ENST00000542484 WDR89Q96FK6 387 aaPredicted RBP7.06□□□□□ -1.28
C2CD3-218ENST00000542484 ACSBG1Q96GR2 724 aa7.06□□□□□ -1.28
C2CD3-218ENST00000542484 MINDY4BA8MYZ0 360 aa7.05□□□□□ -1.28
C2CD3-218ENST00000542484 C1QTNF9BB2RNN3 333 aa7.05□□□□□ -1.28
C2CD3-218ENST00000542484 LIG1P18858 919 aa7.05□□□□□ -1.28
C2CD3-218ENST00000542484 ERCC5P28715 1186 aaPredicted RBP7.05□□□□□ -1.28
C2CD3-218ENST00000542484 EIF4A3P38919 411 aaKnown RBP7.05□□□□□ -1.28
C2CD3-218ENST00000542484 PTPN11Q06124 597 aaPredicted RBP7.05□□□□□ -1.28
C2CD3-218ENST00000542484 SEPT6Q14141 434 aa7.05□□□□□ -1.28
C2CD3-218ENST00000542484 CEP41Q9BYV8 373 aa7.05□□□□□ -1.28
C2CD3-218ENST00000542484 ADAMTS1Q9UHI8 967 aa7.05□□□□□ -1.28
C2CD3-218ENST00000542484 GREM1O60565 184 aa7.04□□□□□ -1.28
C2CD3-218ENST00000542484 GDF11O95390 407 aa7.04□□□□□ -1.28
C2CD3-218ENST00000542484 SLFN14P0C7P3 912 aa7.04□□□□□ -1.28
C2CD3-218ENST00000542484 ADH5P11766 374 aa7.04□□□□□ -1.28
C2CD3-218ENST00000542484 IREB2P48200 963 aaKnown RBP7.04□□□□□ -1.28
C2CD3-218ENST00000542484 FAM160A1Q05DH4 1040 aa7.04□□□□□ -1.28
C2CD3-218ENST00000542484 SNAP47Q5SQN1 464 aa7.04□□□□□ -1.28
C2CD3-218ENST00000542484 FDX2Q6P4F2 183 aa7.04□□□□□ -1.28
C2CD3-218ENST00000542484 FBXL19Q6PCT2 694 aa7.04□□□□□ -1.28
C2CD3-218ENST00000542484 DZIP1LQ8IYY4 767 aaKnown RBP7.04□□□□□ -1.28
C2CD3-218ENST00000542484 GATAD2BQ8WXI9 593 aa7.04□□□□□ -1.28
C2CD3-218ENST00000542484 RAD18Q9NS91 495 aa7.04□□□□□ -1.28
C2CD3-218ENST00000542484 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.04□□□□□ -1.28
C2CD3-218ENST00000542484 SUPT16HQ9Y5B9 1047 aaKnown RBP7.04□□□□□ -1.28
C2CD3-218ENST00000542484 FAM221AA4D161 298 aa7.03□□□□□ -1.28
C2CD3-218ENST00000542484 ITGB2P05107 769 aa7.03□□□□□ -1.28
C2CD3-218ENST00000542484 GLB1P16278 677 aa7.03□□□□□ -1.28
C2CD3-218ENST00000542484 PREPP48147 710 aa7.03□□□□□ -1.28
C2CD3-218ENST00000542484 SOX4Q06945 474 aaPredicted RBP7.03□□□□□ -1.28
C2CD3-218ENST00000542484 ZC3H12AQ5D1E8 599 aaKnown RBP7.03□□□□□ -1.28
C2CD3-218ENST00000542484 BNC2Q6ZN30 1099 aaPredicted RBP7.03□□□□□ -1.28
C2CD3-218ENST00000542484 KIAA0825Q8IV33 1275 aa7.03□□□□□ -1.28
C2CD3-218ENST00000542484 TMEM151AQ8N4L1 468 aa7.03□□□□□ -1.28
C2CD3-218ENST00000542484 GOLM1Q8NBJ4 401 aa7.03□□□□□ -1.28
C2CD3-218ENST00000542484 ZNF296Q8WUU4 475 aaPredicted RBP7.03□□□□□ -1.28
C2CD3-218ENST00000542484 SPON2Q9BUD6 331 aa7.03□□□□□ -1.28
C2CD3-218ENST00000542484 SSBP4Q9BWG4 385 aaPredicted RBP7.03□□□□□ -1.28
C2CD3-218ENST00000542484 PPP1R9AQ9ULJ8 1098 aa7.03□□□□□ -1.28
C2CD3-218ENST00000542484 PCDHA4Q9UN74 947 aa7.03□□□□□ -1.28
C2CD3-218ENST00000542484 TMPRSS2O15393 492 aa7.02□□□□□ -1.29
C2CD3-218ENST00000542484 CILPO75339 1184 aa7.02□□□□□ -1.29
C2CD3-218ENST00000542484 F13A1P00488 732 aa7.02□□□□□ -1.29
C2CD3-218ENST00000542484 ID3Q02535 119 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms