RNA–Protein interactions for RNA: ENST00000542484.1

C2CD3-218, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-218ENST00000542484 AEBP2Q6ZN18 517 aaPredicted RBP21.57■■□□□ 1.04
C2CD3-218ENST00000542484 CHIC1Q5VXU3 224 aa21.27■■□□□ 1
C2CD3-218ENST00000542484 PHF23Q9BUL5 403 aaPredicted RBP18.72■□□□□ 0.59
C2CD3-218ENST00000542484 SENP3Q9H4L4 574 aaPredicted RBP18.29■□□□□ 0.52
C2CD3-218ENST00000542484 PLPPR3Q6T4P5 718 aa17.37■□□□□ 0.37
C2CD3-218ENST00000542484 FOXD1Q16676 465 aa16.92■□□□□ 0.3
C2CD3-218ENST00000542484 PPP6R1Q9UPN7 881 aa16.44■□□□□ 0.22
C2CD3-218ENST00000542484 ADRA2BP18089 450 aa16.42■□□□□ 0.22
C2CD3-218ENST00000542484 PIAS4Q8N2W9 510 aaPredicted RBP16■□□□□ 0.15
C2CD3-218ENST00000542484 MSH5O43196 834 aa15.55■□□□□ 0.08
C2CD3-218ENST00000542484 PPP4R3CPQ6ZMV5 832 aa15.31■□□□□ 0.04
C2CD3-218ENST00000542484 KCNA4P22459 653 aa15.18■□□□□ 0.02
C2CD3-218ENST00000542484 SCAF1Q9H7N4 1312 aaKnown RBP15.05■□□□□ -0
C2CD3-218ENST00000542484 NCBP3Q53F19 620 aaKnown RBP14.97□□□□□ -0.01
C2CD3-218ENST00000542484 CNKSR2Q8WXI2 1034 aa14.85□□□□□ -0.03
C2CD3-218ENST00000542484 MAPK8IP2Q13387 824 aaPredicted RBP14.82□□□□□ -0.04
C2CD3-218ENST00000542484 NPM3O75607 178 aaKnown RBP14.76□□□□□ -0.05
C2CD3-218ENST00000542484 DMRT2Q9Y5R5 561 aa14.64□□□□□ -0.07
C2CD3-218ENST00000542484 RNF216Q9NWF9 866 aaPredicted RBP14.53□□□□□ -0.08
C2CD3-218ENST00000542484 SLC4A1APQ9BWU0 796 aaKnown RBP14.48□□□□□ -0.09
C2CD3-218ENST00000542484 HOXD11P31277 338 aaPredicted RBP14.42□□□□□ -0.1
C2CD3-218ENST00000542484 DNAJC5BQ9UF47 199 aa14.39□□□□□ -0.11
C2CD3-218ENST00000542484 EHMT2Q96KQ7 1210 aa14.28□□□□□ -0.12
C2CD3-218ENST00000542484 CSRNP3Q8WYN3 585 aa14.06□□□□□ -0.16
C2CD3-218ENST00000542484 ZBTB22O15209 634 aa13.98□□□□□ -0.17
C2CD3-218ENST00000542484 FOXD4L1Q9NU39 408 aa13.93□□□□□ -0.18
C2CD3-218ENST00000542484 DCAF8L1A6NGE4 600 aa13.91□□□□□ -0.18
C2CD3-218ENST00000542484 SLC4A2P04920 1241 aa13.89□□□□□ -0.19
C2CD3-218ENST00000542484 POTEDQ86YR6 584 aa13.79□□□□□ -0.2
C2CD3-218ENST00000542484 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.69□□□□□ -0.22
C2CD3-218ENST00000542484 MYCNP04198 464 aaPredicted RBP13.65□□□□□ -0.22
C2CD3-218ENST00000542484 U3KPZ7 1027 aaPredicted RBP13.52□□□□□ -0.25
C2CD3-218ENST00000542484 ATXN8OSP0DMR3 200 aa13.45□□□□□ -0.26
C2CD3-218ENST00000542484 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.43□□□□□ -0.26
C2CD3-218ENST00000542484 HNRNPUL2Q1KMD3 747 aaKnown RBP13.43□□□□□ -0.26
C2CD3-218ENST00000542484 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
C2CD3-218ENST00000542484 RNF39Q9H2S5 420 aa13.35□□□□□ -0.27
C2CD3-218ENST00000542484 APLP2Q06481 763 aa13.25□□□□□ -0.29
C2CD3-218ENST00000542484 ATF5Q9Y2D1 282 aaPredicted RBP13.23□□□□□ -0.29
C2CD3-218ENST00000542484 C1QBPQ07021 282 aaKnown RBP13.21□□□□□ -0.29
C2CD3-218ENST00000542484 SPINK5Q9NQ38 1064 aaPredicted RBP13.06□□□□□ -0.32
C2CD3-218ENST00000542484 ZNF219Q9P2Y4 722 aaPredicted RBP13.03□□□□□ -0.32
C2CD3-218ENST00000542484 CAPN15O75808 1086 aa12.98□□□□□ -0.33
C2CD3-218ENST00000542484 TRHP20396 242 aaPredicted RBP12.96□□□□□ -0.33
C2CD3-218ENST00000542484 POLA2Q14181 598 aa12.82□□□□□ -0.36
C2CD3-218ENST00000542484 CACNB1Q02641 598 aaPredicted RBP12.81□□□□□ -0.36
C2CD3-218ENST00000542484 DSG3P32926 999 aa12.76□□□□□ -0.37
C2CD3-218ENST00000542484 ABCB7O75027 752 aa12.75□□□□□ -0.37
C2CD3-218ENST00000542484 MKRN4PQ13434 485 aaPredicted RBP12.69□□□□□ -0.38
C2CD3-218ENST00000542484 FKBP8Q14318 412 aa12.68□□□□□ -0.38
C2CD3-218ENST00000542484 FBLN2P98095 1184 aa12.67□□□□□ -0.38
C2CD3-218ENST00000542484 ZBTB12Q9Y330 459 aaPredicted RBP12.67□□□□□ -0.38
C2CD3-218ENST00000542484 SPDYE4A6NLX3 237 aa12.49□□□□□ -0.41
C2CD3-218ENST00000542484 OSCARQ8IYS5 282 aa12.39□□□□□ -0.43
C2CD3-218ENST00000542484 PROM2Q8N271 834 aa12.37□□□□□ -0.43
C2CD3-218ENST00000542484 SPDYE2BA6NHP3 402 aa12.34□□□□□ -0.43
C2CD3-218ENST00000542484 SPDYE6P0CI01 402 aa12.34□□□□□ -0.43
C2CD3-218ENST00000542484 SPDYE2Q495Y8 402 aa12.34□□□□□ -0.43
C2CD3-218ENST00000542484 ZNF692Q9BU19 519 aaPredicted RBP12.28□□□□□ -0.44
C2CD3-218ENST00000542484 SSUH2Q9Y2M2 353 aa12.28□□□□□ -0.44
C2CD3-218ENST00000542484 FBXO3Q9UK99 471 aa12.2□□□□□ -0.46
C2CD3-218ENST00000542484 RBM42Q9BTD8 480 aaKnown RBP12.17□□□□□ -0.46
C2CD3-218ENST00000542484 PABPN1Q86U42 306 aaKnown RBP eCLIP12.13□□□□□ -0.47
C2CD3-218ENST00000542484 AKT1S1Q96B36 256 aa12.06□□□□□ -0.48
C2CD3-218ENST00000542484 VASPP50552 380 aaPredicted RBP12.03□□□□□ -0.48
C2CD3-218ENST00000542484 STAG3Q9UJ98 1225 aa12□□□□□ -0.49
C2CD3-218ENST00000542484 AMER1Q5JTC6 1135 aaPredicted RBP11.94□□□□□ -0.5
C2CD3-218ENST00000542484 REM2Q8IYK8 340 aaPredicted RBP11.92□□□□□ -0.5
C2CD3-218ENST00000542484 SPDYE1Q8NFV5 336 aaPredicted RBP11.91□□□□□ -0.5
C2CD3-218ENST00000542484 RTN4Q9NQC3 1192 aaKnown RBP11.88□□□□□ -0.51
C2CD3-218ENST00000542484 IFNLR1Q8IU57 520 aaPredicted RBP11.87□□□□□ -0.51
C2CD3-218ENST00000542484 PLCD3Q8N3E9 789 aa11.8□□□□□ -0.52
C2CD3-218ENST00000542484 CLEC11AQ9Y240 323 aa11.8□□□□□ -0.52
C2CD3-218ENST00000542484 PITPNM1O00562 1244 aa11.79□□□□□ -0.52
C2CD3-218ENST00000542484 MIER1Q8N108 512 aa11.79□□□□□ -0.52
C2CD3-218ENST00000542484 PRR29P0C7W0 189 aa11.74□□□□□ -0.53
C2CD3-218ENST00000542484 PLEKHG5O94827 1062 aa11.73□□□□□ -0.53
C2CD3-218ENST00000542484 KLHL34Q8N239 644 aa11.72□□□□□ -0.53
C2CD3-218ENST00000542484 ZBTB47Q9UFB7 747 aaPredicted RBP11.7□□□□□ -0.54
C2CD3-218ENST00000542484 SPOCK2Q92563 424 aa11.69□□□□□ -0.54
C2CD3-218ENST00000542484 CREBZFQ9NS37 354 aa11.67□□□□□ -0.54
C2CD3-218ENST00000542484 MNX1P50219 401 aaPredicted RBP11.59□□□□□ -0.55
C2CD3-218ENST00000542484 PKD2Q13563 968 aa11.56□□□□□ -0.56
C2CD3-218ENST00000542484 CHRDL2Q6WN34 429 aa11.55□□□□□ -0.56
C2CD3-218ENST00000542484 FXR2P51116 673 aaKnown RBP eCLIP11.54□□□□□ -0.56
C2CD3-218ENST00000542484 NUBP1P53384 320 aa11.52□□□□□ -0.57
C2CD3-218ENST00000542484 CHADLQ6NUI6 762 aa11.5□□□□□ -0.57
C2CD3-218ENST00000542484 PRKAR2AP13861 404 aaKnown RBP11.48□□□□□ -0.57
C2CD3-218ENST00000542484 NPM1P06748 294 aaKnown RBP eCLIP11.47□□□□□ -0.57
C2CD3-218ENST00000542484 PIP4P2Q8N4L2 257 aa11.46□□□□□ -0.57
C2CD3-218ENST00000542484 CIZ1Q9ULV3 898 aaPredicted RBP11.44□□□□□ -0.58
C2CD3-218ENST00000542484 FARP1Q9Y4F1 1045 aaPredicted RBP11.44□□□□□ -0.58
C2CD3-218ENST00000542484 GSE1Q14687 1217 aa11.43□□□□□ -0.58
C2CD3-218ENST00000542484 ECM2O94769 699 aaPredicted RBP11.42□□□□□ -0.58
C2CD3-218ENST00000542484 TRIM41Q8WV44 630 aa11.41□□□□□ -0.58
C2CD3-218ENST00000542484 FAM212AQ96EL1 285 aa11.41□□□□□ -0.58
C2CD3-218ENST00000542484 RASEFQ8IZ41 740 aa11.4□□□□□ -0.58
C2CD3-218ENST00000542484 DCAF8Q5TAQ9 597 aa11.37□□□□□ -0.59
C2CD3-218ENST00000542484 RGL2O15211 777 aa11.31□□□□□ -0.6
C2CD3-218ENST00000542484 DCAF8L2P0C7V8 631 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms