RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.89□□□□□ -1.47
SNHG1-218ENST00000541615 MRFAP1Q9Y605 127 aa5.89□□□□□ -1.47
SNHG1-218ENST00000541615 ZNF644Q9H582 1327 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-218ENST00000541615 BLMP54132 1417 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-218ENST00000541615 GAPVD1Q14C86 1478 aa5.89□□□□□ -1.47
SNHG1-218ENST00000541615 CCDC162PA2VCL2 907 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 ANKRD62A6NC57 917 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 SPDYE3A6NKU9 549 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 MAP2K7O14733 419 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 PPP1R12BO60237 982 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-218ENST00000541615 PLIN1O60240 522 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 ZNF189O75820 626 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-218ENST00000541615 TMCC1O94876 653 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 CCDC166P0CW27 439 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 U2AF1L5P0DN76 240 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-218ENST00000541615 CCDC192P0DO97 292 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 U2AF1Q01081 240 aaKnown RBP eCLIP5.88□□□□□ -1.476e-8■■■□□ 17.5
SNHG1-218ENST00000541615 ADCY1Q08828 1119 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 MAP7Q14244 749 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 PDIA6Q15084 440 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 LRRFIP1Q32MZ4 808 aaKnown RBP5.88□□□□□ -1.47
SNHG1-218ENST00000541615 CCDC93Q567U6 631 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 MYSM1Q5VVJ2 828 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 NUTM2GQ5VZR2 741 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 FAAH2Q6GMR7 532 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 CCDC70Q6NSX1 233 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 CC2D1AQ6P1N0 951 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-218ENST00000541615 CRELD2Q6UXH1 353 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-218ENST00000541615 GIGYF2Q6Y7W6 1299 aaKnown RBP5.88□□□□□ -1.47
SNHG1-218ENST00000541615 LMNTD2Q8IXW0 634 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 SPC24Q8NBT2 197 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 DYDC1Q8WWB3 177 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 GIMAP1Q8WWP7 306 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 RSPH1Q8WYR4 309 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 RABGGTAQ92696 567 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 LRRC45Q96CN5 670 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 XAGE2Q96GT9 111 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 NAF1Q96HR8 494 aaKnown RBP5.88□□□□□ -1.47
SNHG1-218ENST00000541615 SENP7Q9BQF6 1050 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 NAT10Q9H0A0 1025 aaKnown RBP5.88□□□□□ -1.47
SNHG1-218ENST00000541615 KCNF1Q9H3M0 494 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 C1orf115Q9H7X2 142 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 ZWILCHQ9H900 591 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 VIPAS39Q9H9C1 493 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 DNAAF2Q9NVR5 837 aaKnown RBP5.88□□□□□ -1.47
SNHG1-218ENST00000541615 C6orf203Q9P0P8 240 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-218ENST00000541615 HDAC6Q9UBN7 1215 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 SEPT9Q9UHD8 586 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-218ENST00000541615 CROTQ9UKG9 612 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 SSX2IPQ9Y2D8 614 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 PCDHGC5Q9Y5F6 944 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 FAM169AQ9Y6X4 670 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 TTC41PQ6P2S7 1318 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 PHLPP2Q6ZVD8 1323 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 SOGA1O94964 1423 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 CAMSAP2Q08AD1 1489 aa5.88□□□□□ -1.47
SNHG1-218ENST00000541615 FAM25EA8MYX2 175 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 B4DLN1 442 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 TTI1O43156 1089 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 CYTH3O43739 400 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 DNAJC8O75937 253 aaPredicted RBP5.87□□□□□ -1.47
SNHG1-218ENST00000541615 RNF8O76064 485 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 TBC1D8O95759 1140 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 MMEP08473 750 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 BCRP11274 1271 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 ATP5JP18859 108 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 EIF4BP23588 611 aaKnown RBP5.87□□□□□ -1.47
SNHG1-218ENST00000541615 HOXD10P28358 340 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 AMPHP49418 695 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 ARPC4P59998 168 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 KCNC4Q03721 635 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 EN1Q05925 392 aaPredicted RBP5.87□□□□□ -1.47
SNHG1-218ENST00000541615 APOBRQ0VD83 1088 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 TRIM29Q14134 588 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 KCNB1Q14721 858 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 SUZ12Q15022 739 aaKnown RBP5.87□□□□□ -1.47
SNHG1-218ENST00000541615 WHAMMP3Q1A5X7 153 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 CCDC144BQ3MJ40 725 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 LARP1BQ659C4 914 aaKnown RBP5.87□□□□□ -1.47
SNHG1-218ENST00000541615 ZSCAN25Q6NSZ9 544 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 ARHGEF25Q86VW2 580 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 DRC7Q8IY82 874 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 CCDC144CPQ8IYA2 1237 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 LRRC43Q8N309 656 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 TMEM87AQ8NBN3 555 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.87□□□□□ -1.472e-85■□□□□ 9.7
SNHG1-218ENST00000541615 SREK1Q8WXA9 508 aaKnown RBP5.87□□□□□ -1.47
SNHG1-218ENST00000541615 RBM33Q96EV2 1170 aaKnown RBP5.87□□□□□ -1.47
SNHG1-218ENST00000541615 TRIM11Q96F44 468 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 TMX3Q96JJ7 454 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 PAGR1Q9BTK6 254 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 EIF2AQ9BY44 585 aaKnown RBP5.87□□□□□ -1.47
SNHG1-218ENST00000541615 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.87□□□□□ -1.47
SNHG1-218ENST00000541615 RABL2AQ9UBK7 228 aaPredicted RBP5.87□□□□□ -1.47
SNHG1-218ENST00000541615 TSR3Q9UJK0 312 aaKnown RBP5.87□□□□□ -1.47
SNHG1-218ENST00000541615 WWC3Q9ULE0 1092 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 ZNF510Q9Y2H8 683 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 TTLL3Q9Y4R7 772 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 ATP6V1DQ9Y5K8 247 aa5.87□□□□□ -1.47
SNHG1-218ENST00000541615 MROH2BQ7Z745 1585 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms