RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 CBX8Q9HC52 389 aa6.78□□□□□ -1.32
MDM2-227ENST00000540709 PATL2C9JE40 543 aaKnown RBP6.77□□□□□ -1.33
MDM2-227ENST00000540709 MED26O95402 600 aa6.77□□□□□ -1.33
MDM2-227ENST00000540709 TPTE2Q6XPS3 522 aa6.77□□□□□ -1.33
MDM2-227ENST00000540709 WDR89Q96FK6 387 aaPredicted RBP6.77□□□□□ -1.33
MDM2-227ENST00000540709 CCDC86Q9H6F5 360 aaKnown RBP6.77□□□□□ -1.33
MDM2-227ENST00000540709 FAM105AQ9NUU6 356 aa6.77□□□□□ -1.33
MDM2-227ENST00000540709 DAGLAQ9Y4D2 1042 aa6.77□□□□□ -1.33
MDM2-227ENST00000540709 FBXO24O75426 580 aa6.76□□□□□ -1.33
MDM2-227ENST00000540709 SLFN14P0C7P3 912 aa6.76□□□□□ -1.33
MDM2-227ENST00000540709 XRCC5P13010 732 aaKnown RBP6.76□□□□□ -1.33
MDM2-227ENST00000540709 SHISA5Q8N114 240 aa6.76□□□□□ -1.33
MDM2-227ENST00000540709 WDR18Q9BV38 432 aa6.76□□□□□ -1.33
MDM2-227ENST00000540709 PPP1R9AQ9ULJ8 1098 aa6.76□□□□□ -1.33
MDM2-227ENST00000540709 LEMD3Q9Y2U8 911 aa6.76□□□□□ -1.33
MDM2-227ENST00000540709 F13BP05160 661 aa6.75□□□□□ -1.33
MDM2-227ENST00000540709 GSTP1P09211 210 aaKnown RBP6.75□□□□□ -1.33
MDM2-227ENST00000540709 MAP7Q14244 749 aa6.75□□□□□ -1.33
MDM2-227ENST00000540709 ALG1LQ6GMV1 187 aa6.75□□□□□ -1.33
MDM2-227ENST00000540709 SULF2Q8IWU5 870 aa6.75□□□□□ -1.33
MDM2-227ENST00000540709 PIDD1Q9HB75 910 aa6.75□□□□□ -1.33
MDM2-227ENST00000540709 PRR19A6NJB7 356 aa6.74□□□□□ -1.33
MDM2-227ENST00000540709 RNGTTO60942 597 aaKnown RBP6.74□□□□□ -1.33
MDM2-227ENST00000540709 LDHBP07195 334 aaKnown RBP6.74□□□□□ -1.33
MDM2-227ENST00000540709 P4HBP07237 508 aaKnown RBP6.74□□□□□ -1.33
MDM2-227ENST00000540709 GSTT1P30711 240 aa6.74□□□□□ -1.33
MDM2-227ENST00000540709 ADMP35318 185 aa6.74□□□□□ -1.33
MDM2-227ENST00000540709 CD97P48960 835 aa6.74□□□□□ -1.33
MDM2-227ENST00000540709 HNRNPUQ00839 825 aaKnown RBP eCLIP6.74□□□□□ -1.33
MDM2-227ENST00000540709 FMR1Q06787 632 aaKnown RBP eCLIP6.74□□□□□ -1.33
MDM2-227ENST00000540709 MAP1SQ66K74 1059 aaPredicted RBP6.74□□□□□ -1.33
MDM2-227ENST00000540709 INTS5Q6P9B9 1019 aaKnown RBP6.74□□□□□ -1.33
MDM2-227ENST00000540709 STK35Q8TDR2 534 aa6.74□□□□□ -1.33
MDM2-227ENST00000540709 FBF1Q8TES7 1133 aa6.74□□□□□ -1.33
MDM2-227ENST00000540709 ACSBG1Q96GR2 724 aa6.74□□□□□ -1.33
MDM2-227ENST00000540709 OSBPL7Q9BZF2 842 aa6.74□□□□□ -1.33
MDM2-227ENST00000540709 PIM2Q9P1W9 311 aa6.74□□□□□ -1.33
MDM2-227ENST00000540709 SPG7Q9UQ90 795 aa6.74□□□□□ -1.33
MDM2-227ENST00000540709 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.73□□□□□ -1.33
MDM2-227ENST00000540709 FAM170BA6NMN3 283 aa6.73□□□□□ -1.33
MDM2-227ENST00000540709 ZNF862O60290 1169 aa6.73□□□□□ -1.33
MDM2-227ENST00000540709 HOXA10P31260 410 aaPredicted RBP6.73□□□□□ -1.33
MDM2-227ENST00000540709 SEMA6CQ9H3T2 930 aa6.73□□□□□ -1.33
MDM2-227ENST00000540709 SSU72Q9NP77 194 aaKnown RBP6.73□□□□□ -1.33
MDM2-227ENST00000540709 PRKAG2Q9UGJ0 569 aa6.73□□□□□ -1.33
MDM2-227ENST00000540709 DYNC1LI2O43237 492 aaPredicted RBP6.72□□□□□ -1.33
MDM2-227ENST00000540709 ARNTP27540 789 aa6.72□□□□□ -1.33
MDM2-227ENST00000540709 ID3Q02535 119 aa6.72□□□□□ -1.33
MDM2-227ENST00000540709 DUSP27Q5VZP5 1158 aa6.72□□□□□ -1.33
MDM2-227ENST00000540709 ZAR1Q86SH2 424 aa6.72□□□□□ -1.33
MDM2-227ENST00000540709 EZH1Q92800 747 aaPredicted RBP6.72□□□□□ -1.33
MDM2-227ENST00000540709 LRRC4CQ9HCJ2 640 aa6.72□□□□□ -1.33
MDM2-227ENST00000540709 TMPRSS2O15393 492 aa6.71□□□□□ -1.34
MDM2-227ENST00000540709 CYP26A1O43174 497 aa6.71□□□□□ -1.34
MDM2-227ENST00000540709 HCLS1P14317 486 aaPredicted RBP6.71□□□□□ -1.34
MDM2-227ENST00000540709 NME2P22392 152 aa6.71□□□□□ -1.34
MDM2-227ENST00000540709 MPRIPQ6WCQ1 1025 aa6.71□□□□□ -1.34
MDM2-227ENST00000540709 C3orf58Q8NDZ4 430 aa6.71□□□□□ -1.34
MDM2-227ENST00000540709 FANCD2OSQ96PS1 177 aa6.71□□□□□ -1.34
MDM2-227ENST00000540709 EMILIN2Q9BXX0 1053 aa6.71□□□□□ -1.34
MDM2-227ENST00000540709 CEP44Q9C0F1 390 aa6.71□□□□□ -1.34
MDM2-227ENST00000540709 ATXN3LQ9H3M9 355 aa6.71□□□□□ -1.34
MDM2-227ENST00000540709 ACSS3Q9H6R3 686 aa6.71□□□□□ -1.34
MDM2-227ENST00000540709 PICK1Q9NRD5 415 aa6.71□□□□□ -1.34
MDM2-227ENST00000540709 CSADQ9Y600 493 aa6.71□□□□□ -1.34
MDM2-227ENST00000540709 ANKRD33BA6NCL7 494 aa6.7□□□□□ -1.34
MDM2-227ENST00000540709 USP17L7P0C7H9 530 aa6.7□□□□□ -1.34
MDM2-227ENST00000540709 TTLL4Q14679 1199 aa6.7□□□□□ -1.34
MDM2-227ENST00000540709 SND1Q7KZF4 910 aaKnown RBP eCLIP6.7□□□□□ -1.34
MDM2-227ENST00000540709 PDZD3Q86UT5 571 aa6.7□□□□□ -1.34
MDM2-227ENST00000540709 KRTAP1-3Q8IUG1 177 aa6.7□□□□□ -1.34
MDM2-227ENST00000540709 GRIN3AQ8TCU5 1115 aa6.7□□□□□ -1.34
MDM2-227ENST00000540709 GPBAR1Q8TDU6 330 aa6.7□□□□□ -1.34
MDM2-227ENST00000540709 NECAB3Q96P71 396 aaPredicted RBP6.7□□□□□ -1.34
MDM2-227ENST00000540709 METTL22Q9BUU2 404 aaPredicted RBP6.7□□□□□ -1.34
MDM2-227ENST00000540709 SRCIN1Q9C0H9 1055 aa6.7□□□□□ -1.34
MDM2-227ENST00000540709 KRT82Q9NSB4 513 aa6.7□□□□□ -1.34
MDM2-227ENST00000540709 CRIM1Q9NZV1 1036 aa6.7□□□□□ -1.34
MDM2-227ENST00000540709 TTF2Q9UNY4 1162 aaKnown RBP6.7□□□□□ -1.34
MDM2-227ENST00000540709 SAMM50Q9Y512 469 aa6.7□□□□□ -1.34
MDM2-227ENST00000540709 GIPC1O14908 333 aa6.69□□□□□ -1.34
MDM2-227ENST00000540709 PAGE1O75459 146 aa6.69□□□□□ -1.34
MDM2-227ENST00000540709 WNT11O96014 354 aa6.69□□□□□ -1.34
MDM2-227ENST00000540709 CDK5R2Q13319 367 aa6.69□□□□□ -1.34
MDM2-227ENST00000540709 KIF4BQ2VIQ3 1234 aa6.69□□□□□ -1.34
MDM2-227ENST00000540709 ZNF765Q7L2R6 523 aa6.69□□□□□ -1.34
MDM2-227ENST00000540709 SMYD4Q8IYR2 804 aaPredicted RBP6.69□□□□□ -1.34
MDM2-227ENST00000540709 C12orf49Q9H741 205 aa6.69□□□□□ -1.34
MDM2-227ENST00000540709 DISC1Q9NRI5 854 aa6.69□□□□□ -1.34
MDM2-227ENST00000540709 KIAA1324LA8MWY0 1029 aaPredicted RBP6.68□□□□□ -1.34
MDM2-227ENST00000540709 ENC1O14682 589 aa6.68□□□□□ -1.34
MDM2-227ENST00000540709 FOSL1P15407 271 aa6.68□□□□□ -1.34
MDM2-227ENST00000540709 EAPPQ56P03 285 aaPredicted RBP6.68□□□□□ -1.34
MDM2-227ENST00000540709 RNF19AQ9NV58 838 aa6.68□□□□□ -1.34
MDM2-227ENST00000540709 FAM8A1Q9UBU6 413 aa6.68□□□□□ -1.34
MDM2-227ENST00000540709 ANGEL1Q9UNK9 670 aaKnown RBP6.68□□□□□ -1.34
MDM2-227ENST00000540709 DCDC2CA8MYV0 355 aa6.67□□□□□ -1.34
MDM2-227ENST00000540709 ADAMTS4O75173 837 aa6.67□□□□□ -1.34
MDM2-227ENST00000540709 BMP6P22004 513 aa6.67□□□□□ -1.34
MDM2-227ENST00000540709 EIF4BP23588 611 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms