RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 RABL6Q3YEC7 729 aaPredicted RBP11.38□□□□□ -0.59
PHC1-208ENST00000540574 FAM47AQ5JRC9 791 aa11.38□□□□□ -0.59
PHC1-208ENST00000540574 IFNL3Q8IZI9 196 aa11.38□□□□□ -0.59
PHC1-208ENST00000540574 CTCFLQ8NI51 663 aaPredicted RBP11.38□□□□□ -0.59
PHC1-208ENST00000540574 KIF18AQ8NI77 898 aa11.38□□□□□ -0.59
PHC1-208ENST00000540574 CDC5LQ99459 802 aaKnown RBP11.38□□□□□ -0.59
PHC1-208ENST00000540574 AATFQ9NY61 560 aaKnown RBP eCLIP11.38□□□□□ -0.59
PHC1-208ENST00000540574 DNAI1Q9UI46 699 aa11.38□□□□□ -0.59
PHC1-208ENST00000540574 V9GY48 417 aaPredicted RBP11.38□□□□□ -0.59
PHC1-208ENST00000540574 USP42Q9H9J4 1324 aaKnown RBP11.38□□□□□ -0.59
PHC1-208ENST00000540574 MAGEB6P1A0A0J9YX57 407 aa11.38□□□□□ -0.59
PHC1-208ENST00000540574 F8W031 263 aaPredicted RBP11.38□□□□□ -0.59
PHC1-208ENST00000540574 SNW1Q13573 536 aaKnown RBP11.38□□□□□ -0.59
PHC1-208ENST00000540574 SYT10Q6XYQ8 523 aa11.38□□□□□ -0.59
PHC1-208ENST00000540574 CATIPQ7Z7H3 387 aa11.38□□□□□ -0.59
PHC1-208ENST00000540574 GRAMD1CQ8IYS0 662 aa11.38□□□□□ -0.59
PHC1-208ENST00000540574 TMEM87AQ8NBN3 555 aa11.38□□□□□ -0.59
PHC1-208ENST00000540574 LPIN2Q92539 896 aa11.38□□□□□ -0.59
PHC1-208ENST00000540574 EEF2KMTQ96G04 330 aa11.38□□□□□ -0.59
PHC1-208ENST00000540574 ZNF274Q96GC6 653 aaPredicted RBP11.38□□□□□ -0.59
PHC1-208ENST00000540574 ZNF652Q9Y2D9 606 aa11.38□□□□□ -0.59
PHC1-208ENST00000540574 KDM6AO15550 1401 aaPredicted RBP11.38□□□□□ -0.59
PHC1-208ENST00000540574 TPM1P09493 284 aa11.37□□□□□ -0.59
PHC1-208ENST00000540574 TBC1D10CQ8IV04 446 aa11.37□□□□□ -0.59
PHC1-208ENST00000540574 PRIMPOLQ96LW4 560 aa11.37□□□□□ -0.59
PHC1-208ENST00000540574 NR5A1Q13285 461 aa11.37□□□□□ -0.59
PHC1-208ENST00000540574 BCL2L12Q9HB09 334 aa11.37□□□□□ -0.59
PHC1-208ENST00000540574 MON2Q7Z3U7 1717 aa11.37□□□□□ -0.59
PHC1-208ENST00000540574 CTDNEP1O95476 244 aa11.37□□□□□ -0.59
PHC1-208ENST00000540574 SKIDA1Q1XH10 827 aa11.37□□□□□ -0.59
PHC1-208ENST00000540574 CYB5R4Q7L1T6 521 aa11.37□□□□□ -0.59
PHC1-208ENST00000540574 WASF1Q92558 559 aa11.37□□□□□ -0.59
PHC1-208ENST00000540574 SMARCE1Q969G3 411 aa11.37□□□□□ -0.59
PHC1-208ENST00000540574 ZSWIM5Q9P217 1185 aa11.37□□□□□ -0.59
PHC1-208ENST00000540574 MED23Q9ULK4 1368 aa11.37□□□□□ -0.59
PHC1-208ENST00000540574 CCDC196A0A1B0GTZ2 297 aa11.36□□□□□ -0.59
PHC1-208ENST00000540574 PDE4CQ08493 712 aa11.36□□□□□ -0.59
PHC1-208ENST00000540574 CCDC144BQ3MJ40 725 aa11.36□□□□□ -0.59
PHC1-208ENST00000540574 SUSD4Q5VX71 490 aa11.36□□□□□ -0.59
PHC1-208ENST00000540574 APOA5Q6Q788 366 aa11.36□□□□□ -0.59
PHC1-208ENST00000540574 KIAA1468Q9P260 1216 aa11.36□□□□□ -0.59
PHC1-208ENST00000540574 ERCC3P19447 782 aa11.36□□□□□ -0.59
PHC1-208ENST00000540574 RASGRF1Q13972 1273 aa11.36□□□□□ -0.59
PHC1-208ENST00000540574 PPFIBP1Q86W92 1011 aa11.36□□□□□ -0.59
PHC1-208ENST00000540574 LCORLQ8N3X6 602 aa11.36□□□□□ -0.59
PHC1-208ENST00000540574 ESR2Q92731 530 aa11.36□□□□□ -0.59
PHC1-208ENST00000540574 VWA3AA6NCI4 1184 aa11.36□□□□□ -0.59
PHC1-208ENST00000540574 DYNLL1P63167 89 aaKnown RBP11.36□□□□□ -0.59
PHC1-208ENST00000540574 TSR1Q2NL82 804 aaKnown RBP11.36□□□□□ -0.59
PHC1-208ENST00000540574 ADALQ6DHV7 355 aa11.36□□□□□ -0.59
PHC1-208ENST00000540574 MYRIPQ8NFW9 859 aa11.36□□□□□ -0.59
PHC1-208ENST00000540574 KRT23Q9C075 422 aa11.36□□□□□ -0.59
PHC1-208ENST00000540574 RNF41Q9H4P4 317 aaPredicted RBP11.36□□□□□ -0.59
PHC1-208ENST00000540574 MCM9Q9NXL9 1143 aa11.36□□□□□ -0.59
PHC1-208ENST00000540574 KCNH3Q9ULD8 1083 aa11.36□□□□□ -0.59
PHC1-208ENST00000540574 SSBP05455 408 aaKnown RBP eCLIP11.35□□□□□ -0.59
PHC1-208ENST00000540574 MCM7P33993 719 aa11.35□□□□□ -0.59
PHC1-208ENST00000540574 KARSQ15046 597 aaKnown RBP11.35□□□□□ -0.59
PHC1-208ENST00000540574 KIAA1524Q8TCG1 905 aa11.35□□□□□ -0.59
PHC1-208ENST00000540574 NCAPD2Q15021 1401 aa11.35□□□□□ -0.59
PHC1-208ENST00000540574 ERICH4A6NGS2 130 aa11.35□□□□□ -0.59
PHC1-208ENST00000540574 ATP1A3P13637 1013 aa11.35□□□□□ -0.59
PHC1-208ENST00000540574 ADD2P35612 726 aa11.35□□□□□ -0.59
PHC1-208ENST00000540574 CRKLP46109 303 aaKnown RBP11.35□□□□□ -0.59
PHC1-208ENST00000540574 BRAPQ7Z569 592 aa11.35□□□□□ -0.59
PHC1-208ENST00000540574 KCNF1Q9H3M0 494 aa11.35□□□□□ -0.59
PHC1-208ENST00000540574 CCDC87Q9NVE4 849 aa11.35□□□□□ -0.59
PHC1-208ENST00000540574 RNF216Q9NWF9 866 aaPredicted RBP11.35□□□□□ -0.59
PHC1-208ENST00000540574 RCOR1Q9UKL0 485 aa11.35□□□□□ -0.59
PHC1-208ENST00000540574 CHRNDQ07001 517 aa11.35□□□□□ -0.59
PHC1-208ENST00000540574 AKNAD1Q5T1N1 836 aa11.35□□□□□ -0.59
PHC1-208ENST00000540574 MTERF4Q7Z6M4 381 aaKnown RBP11.35□□□□□ -0.59
PHC1-208ENST00000540574 LINC00301Q8NCQ3 95 aa11.35□□□□□ -0.59
PHC1-208ENST00000540574 ELP1O95163 1332 aa11.35□□□□□ -0.59
PHC1-208ENST00000540574 PIK3C2AO00443 1686 aa11.35□□□□□ -0.59
PHC1-208ENST00000540574 PXDNLA1KZ92 1463 aa11.35□□□□□ -0.59
PHC1-208ENST00000540574 KIF28PB7ZC32 967 aa11.35□□□□□ -0.59
PHC1-208ENST00000540574 KCNQ2O43526 872 aa11.35□□□□□ -0.59
PHC1-208ENST00000540574 CDC27P30260 824 aa11.35□□□□□ -0.59
PHC1-208ENST00000540574 TEX35Q5T0J7 233 aa11.35□□□□□ -0.59
PHC1-208ENST00000540574 ANKRD20A12PQ8NF67 263 aa11.35□□□□□ -0.59
PHC1-208ENST00000540574 SETDB2Q96T68 719 aa11.35□□□□□ -0.59
PHC1-208ENST00000540574 ZHX3Q9H4I2 956 aa11.35□□□□□ -0.59
PHC1-208ENST00000540574 SAP30BPQ9UHR5 308 aaKnown RBP11.35□□□□□ -0.59
PHC1-208ENST00000540574 USP17L12C9JPN9 530 aa11.34□□□□□ -0.59
PHC1-208ENST00000540574 USP17L21D6R901 530 aa11.34□□□□□ -0.59
PHC1-208ENST00000540574 GNPATO15228 680 aa11.34□□□□□ -0.59
PHC1-208ENST00000540574 CASP1P29466 404 aa11.34□□□□□ -0.59
PHC1-208ENST00000540574 FANCCQ00597 558 aa11.34□□□□□ -0.59
PHC1-208ENST00000540574 IKQ13123 557 aaPredicted RBP11.34□□□□□ -0.59
PHC1-208ENST00000540574 NLRP3Q96P20 1036 aa11.34□□□□□ -0.59
PHC1-208ENST00000540574 LOC102724428A0A0B4J2F2 783 aa11.34□□□□□ -0.59
PHC1-208ENST00000540574 C6orf229H3BNL8 230 aa11.34□□□□□ -0.59
PHC1-208ENST00000540574 CDC25AP30304 524 aa11.34□□□□□ -0.59
PHC1-208ENST00000540574 SIK1P57059 783 aa11.34□□□□□ -0.59
PHC1-208ENST00000540574 GNG11P61952 73 aa11.34□□□□□ -0.59
PHC1-208ENST00000540574 FILIP1LQ4L180 1135 aa11.34□□□□□ -0.59
PHC1-208ENST00000540574 COL15A1P39059 1388 aa11.34□□□□□ -0.59
PHC1-208ENST00000540574 CBFA2T2O43439 604 aa11.34□□□□□ -0.59
PHC1-208ENST00000540574 KRI1Q8N9T8 703 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms