RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 SNAPC4Q5SXM2 1469 aa8.37□□□□□ -1.07
MRE11-209ENST00000540013 PBRM1Q86U86 1689 aa8.37□□□□□ -1.07
MRE11-209ENST00000540013 PLEKHD1A6NEE1 506 aa8.36□□□□□ -1.07
MRE11-209ENST00000540013 SOX1O00570 391 aaPredicted RBP8.36□□□□□ -1.07
MRE11-209ENST00000540013 SORBS3O60504 671 aa8.36□□□□□ -1.07
MRE11-209ENST00000540013 GRIK4Q16099 956 aa8.36□□□□□ -1.07
MRE11-209ENST00000540013 MICAL1Q8TDZ2 1067 aa8.36□□□□□ -1.07
MRE11-209ENST00000540013 CARD10Q9BWT7 1032 aa8.36□□□□□ -1.07
MRE11-209ENST00000540013 USP21Q9UK80 565 aa8.36□□□□□ -1.07
MRE11-209ENST00000540013 AKAP2Q9Y2D5 859 aa8.36□□□□□ -1.07
MRE11-209ENST00000540013 BIVM-ERCC5R4GMW8 1640 aa8.36□□□□□ -1.07
MRE11-209ENST00000540013 ABCA10Q8WWZ4 1543 aa8.35□□□□□ -1.07
MRE11-209ENST00000540013 GRIN2BQ13224 1484 aa8.35□□□□□ -1.07
MRE11-209ENST00000540013 MAGI1Q96QZ7 1491 aaPredicted RBP8.35□□□□□ -1.07
MRE11-209ENST00000540013 CYP11A1P05108 521 aa8.35□□□□□ -1.07
MRE11-209ENST00000540013 AP3B2Q13367 1082 aa8.35□□□□□ -1.07
MRE11-209ENST00000540013 TOP2BQ02880 1626 aa8.35□□□□□ -1.07
MRE11-209ENST00000540013 ARHGEF11O15085 1522 aa8.34□□□□□ -1.07
MRE11-209ENST00000540013 GAPVD1Q14C86 1478 aa8.34□□□□□ -1.07
MRE11-209ENST00000540013 ABCA5Q8WWZ7 1642 aa8.34□□□□□ -1.07
MRE11-209ENST00000540013 SCAMP3O14828 347 aaKnown RBP8.34□□□□□ -1.07
MRE11-209ENST00000540013 USP17L7P0C7H9 530 aa8.34□□□□□ -1.07
MRE11-209ENST00000540013 TAGLNQ01995 201 aaKnown RBP8.34□□□□□ -1.07
MRE11-209ENST00000540013 GSTM4Q03013 218 aa8.34□□□□□ -1.07
MRE11-209ENST00000540013 TMEM130Q8N3G9 435 aa8.34□□□□□ -1.07
MRE11-209ENST00000540013 GALNT11Q8NCW6 608 aa8.34□□□□□ -1.07
MRE11-209ENST00000540013 C3orf58Q8NDZ4 430 aa8.34□□□□□ -1.07
MRE11-209ENST00000540013 KLHDC7BQ96G42 594 aa8.34□□□□□ -1.07
MRE11-209ENST00000540013 TMEM39AQ9NV64 488 aa8.34□□□□□ -1.07
MRE11-209ENST00000540013 GPN3Q9UHW5 284 aaPredicted RBP8.34□□□□□ -1.07
MRE11-209ENST00000540013 WRNQ14191 1432 aaPredicted RBP eCLIP8.34□□□□□ -1.07
MRE11-209ENST00000540013 KRBA1A5PL33 1030 aa8.33□□□□□ -1.08
MRE11-209ENST00000540013 SYNJ1O43426 1573 aa8.33□□□□□ -1.08
MRE11-209ENST00000540013 SELPP16109 830 aa8.33□□□□□ -1.08
MRE11-209ENST00000540013 HDLBPQ00341 1268 aaKnown RBP8.33□□□□□ -1.08
MRE11-209ENST00000540013 DUOXA2Q1HG44 320 aa8.33□□□□□ -1.08
MRE11-209ENST00000540013 ZNF423Q2M1K9 1284 aa8.33□□□□□ -1.08
MRE11-209ENST00000540013 TICAM2Q86XR7 235 aa8.33□□□□□ -1.08
MRE11-209ENST00000540013 TANGO6Q9C0B7 1094 aa8.33□□□□□ -1.08
MRE11-209ENST00000540013 LNPKQ9C0E8 428 aa8.33□□□□□ -1.08
MRE11-209ENST00000540013 RIPOR2Q9Y4F9 1068 aa8.33□□□□□ -1.08
MRE11-209ENST00000540013 SAMM50Q9Y512 469 aa8.33□□□□□ -1.08
MRE11-209ENST00000540013 TLDC2A0PJX2 215 aa8.32□□□□□ -1.08
MRE11-209ENST00000540013 RAB11FIP3O75154 756 aa8.32□□□□□ -1.08
MRE11-209ENST00000540013 CLSTN1O94985 981 aa8.32□□□□□ -1.08
MRE11-209ENST00000540013 FOXD4L6Q3SYB3 417 aaPredicted RBP8.32□□□□□ -1.08
MRE11-209ENST00000540013 FOXD4L3Q6VB84 417 aaPredicted RBP8.32□□□□□ -1.08
MRE11-209ENST00000540013 Q8N3U1 123 aa8.32□□□□□ -1.08
MRE11-209ENST00000540013 CRELD1Q96HD1 420 aa8.32□□□□□ -1.08
MRE11-209ENST00000540013 BACH2Q9BYV9 841 aa8.32□□□□□ -1.08
MRE11-209ENST00000540013 BCCIPQ9P287 314 aaKnown RBP eCLIP8.32□□□□□ -1.08
MRE11-209ENST00000540013 VTI1BQ9UEU0 232 aa8.32□□□□□ -1.08
MRE11-209ENST00000540013 MSTNO14793 375 aa8.31□□□□□ -1.08
MRE11-209ENST00000540013 NLRP12P59046 1061 aa8.31□□□□□ -1.08
MRE11-209ENST00000540013 ADGRE1Q14246 886 aa8.31□□□□□ -1.08
MRE11-209ENST00000540013 SHISA2Q6UWI4 295 aa8.31□□□□□ -1.08
MRE11-209ENST00000540013 DNAJC2Q99543 621 aaKnown RBP8.31□□□□□ -1.08
MRE11-209ENST00000540013 CORO1BQ9BR76 489 aa8.31□□□□□ -1.08
MRE11-209ENST00000540013 AKTIPQ9H8T0 292 aa8.31□□□□□ -1.08
MRE11-209ENST00000540013 TTF2Q9UNY4 1162 aaKnown RBP8.31□□□□□ -1.08
MRE11-209ENST00000540013 SYNJ2O15056 1496 aa8.31□□□□□ -1.08
MRE11-209ENST00000540013 LOC102724159A0A0B4J2E5 919 aa8.3□□□□□ -1.08
MRE11-209ENST00000540013 C1QTNF9BB2RNN3 333 aa8.3□□□□□ -1.08
MRE11-209ENST00000540013 TM4SF5O14894 197 aa8.3□□□□□ -1.08
MRE11-209ENST00000540013 MRPL58Q14197 206 aaKnown RBP8.3□□□□□ -1.08
MRE11-209ENST00000540013 MBTPS1Q14703 1052 aa8.3□□□□□ -1.08
MRE11-209ENST00000540013 PWP2Q15269 919 aaKnown RBP8.3□□□□□ -1.08
MRE11-209ENST00000540013 PLA2G4EQ3MJ16 856 aa8.3□□□□□ -1.08
MRE11-209ENST00000540013 TAF7LQ5H9L4 462 aa8.3□□□□□ -1.08
MRE11-209ENST00000540013 ACAD11Q709F0 780 aa8.3□□□□□ -1.08
MRE11-209ENST00000540013 CD163Q86VB7 1156 aa8.3□□□□□ -1.08
MRE11-209ENST00000540013 TXNRD3Q86VQ6 643 aa8.3□□□□□ -1.08
MRE11-209ENST00000540013 ARMC5Q96C12 935 aa8.3□□□□□ -1.08
MRE11-209ENST00000540013 USP26Q9BXU7 913 aa8.3□□□□□ -1.08
MRE11-209ENST00000540013 EMILIN2Q9BXX0 1053 aa8.3□□□□□ -1.08
MRE11-209ENST00000540013 RNF208Q9H0X6 261 aa8.3□□□□□ -1.08
MRE11-209ENST00000540013 METTL14Q9HCE5 456 aaKnown RBP8.3□□□□□ -1.08
MRE11-209ENST00000540013 SBNO2Q9Y2G9 1366 aa8.3□□□□□ -1.08
MRE11-209ENST00000540013 CLASP1Q7Z460 1538 aa8.29□□□□□ -1.08
MRE11-209ENST00000540013 F8W735 103 aaPredicted RBP8.29□□□□□ -1.08
MRE11-209ENST00000540013 CHRNA4P43681 627 aa8.29□□□□□ -1.08
MRE11-209ENST00000540013 ST13P50502 369 aaKnown RBP8.29□□□□□ -1.08
MRE11-209ENST00000540013 RAD51AP2Q09MP3 1159 aa8.29□□□□□ -1.08
MRE11-209ENST00000540013 FAAP100Q0VG06 881 aa8.29□□□□□ -1.08
MRE11-209ENST00000540013 POU4F3Q15319 338 aa8.29□□□□□ -1.08
MRE11-209ENST00000540013 SV2BQ7L1I2 683 aa8.29□□□□□ -1.08
MRE11-209ENST00000540013 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.29□□□□□ -1.08
MRE11-209ENST00000540013 CEP41Q9BYV8 373 aa8.29□□□□□ -1.08
MRE11-209ENST00000540013 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.29□□□□□ -1.08
MRE11-209ENST00000540013 ADAM11O75078 769 aa8.28□□□□□ -1.08
MRE11-209ENST00000540013 RLBP1P12271 317 aa8.28□□□□□ -1.08
MRE11-209ENST00000540013 GATA4P43694 442 aa8.28□□□□□ -1.08
MRE11-209ENST00000540013 TAF1CQ15572 869 aaPredicted RBP8.28□□□□□ -1.08
MRE11-209ENST00000540013 LCE3BQ5TA77 95 aa8.28□□□□□ -1.08
MRE11-209ENST00000540013 TPTE2Q6XPS3 522 aa8.28□□□□□ -1.08
MRE11-209ENST00000540013 SLC43A3Q8NBI5 491 aa8.28□□□□□ -1.08
MRE11-209ENST00000540013 FAM161BQ96MY7 647 aa8.28□□□□□ -1.08
MRE11-209ENST00000540013 NECAB3Q96P71 396 aaPredicted RBP8.28□□□□□ -1.08
MRE11-209ENST00000540013 TINF2Q9BSI4 451 aa8.28□□□□□ -1.08
MRE11-209ENST00000540013 RUSC1Q9BVN2 902 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms