RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 PUS7LQ9H0K6 701 aaKnown RBP13.97□□□□□ -0.17
VTN-202ENST00000539746 ALDH8A1Q9H2A2 487 aaPredicted RBP13.97□□□□□ -0.17
VTN-202ENST00000539746 SH2B1Q9NRF2 756 aaPredicted RBP13.97□□□□□ -0.17
VTN-202ENST00000539746 KIF3AQ9Y496 699 aa13.97□□□□□ -0.17
VTN-202ENST00000539746 MYH7P12883 1935 aa13.97□□□□□ -0.17
VTN-202ENST00000539746 SLX4Q8IY92 1834 aa13.97□□□□□ -0.17
VTN-202ENST00000539746 CCDC88AQ3V6T2 1871 aa13.96□□□□□ -0.17
VTN-202ENST00000539746 M0R2C6 588 aa13.96□□□□□ -0.17
VTN-202ENST00000539746 SLC27A2O14975 620 aa13.96□□□□□ -0.17
VTN-202ENST00000539746 HLA-DOAP06340 250 aa13.96□□□□□ -0.17
VTN-202ENST00000539746 PRDX5P30044 214 aa13.96□□□□□ -0.17
VTN-202ENST00000539746 NEK4P51957 841 aa13.96□□□□□ -0.17
VTN-202ENST00000539746 DOK7Q18PE1 504 aa13.96□□□□□ -0.17
VTN-202ENST00000539746 RSBN1LQ6PCB5 846 aaPredicted RBP13.96□□□□□ -0.17
VTN-202ENST00000539746 MFSD6Q6ZSS7 791 aa13.96□□□□□ -0.17
VTN-202ENST00000539746 RUFY3Q7L099 469 aa13.96□□□□□ -0.17
VTN-202ENST00000539746 TTC6Q86TZ1 520 aa13.96□□□□□ -0.17
VTN-202ENST00000539746 ZNF589Q86UQ0 364 aaPredicted RBP13.96□□□□□ -0.17
VTN-202ENST00000539746 HOOK2Q96ED9 719 aa13.96□□□□□ -0.17
VTN-202ENST00000539746 ZDHHC15Q96MV8 337 aa13.96□□□□□ -0.17
VTN-202ENST00000539746 FHDC1Q9C0D6 1143 aaPredicted RBP13.96□□□□□ -0.17
VTN-202ENST00000539746 DHX36Q9H2U1 1008 aaKnown RBP13.96□□□□□ -0.17
VTN-202ENST00000539746 DBNDD1Q9H9R9 158 aa13.96□□□□□ -0.17
VTN-202ENST00000539746 SNED1Q8TER0 1413 aa13.96□□□□□ -0.18
VTN-202ENST00000539746 TAF1P21675 1872 aa13.95□□□□□ -0.18
VTN-202ENST00000539746 COL1A1P02452 1464 aaPredicted RBP13.95□□□□□ -0.18
VTN-202ENST00000539746 DHX16O60231 1041 aaKnown RBP13.95□□□□□ -0.18
VTN-202ENST00000539746 FGAP02671 866 aa13.95□□□□□ -0.18
VTN-202ENST00000539746 VIL1P09327 827 aaKnown RBP13.95□□□□□ -0.18
VTN-202ENST00000539746 CASTP20810 708 aaKnown RBP13.95□□□□□ -0.18
VTN-202ENST00000539746 MCM5P33992 734 aa13.95□□□□□ -0.18
VTN-202ENST00000539746 TNFAIP1Q13829 316 aa13.95□□□□□ -0.18
VTN-202ENST00000539746 SBK1Q52WX2 424 aa13.95□□□□□ -0.18
VTN-202ENST00000539746 DACT2Q5SW24 774 aa13.95□□□□□ -0.18
VTN-202ENST00000539746 IFNL3Q8IZI9 196 aa13.95□□□□□ -0.18
VTN-202ENST00000539746 ESR2Q92731 530 aa13.95□□□□□ -0.18
VTN-202ENST00000539746 JAKMIP1Q96N16 626 aaKnown RBP13.95□□□□□ -0.18
VTN-202ENST00000539746 ANAPC4Q9UJX5 808 aa13.95□□□□□ -0.18
VTN-202ENST00000539746 SNX14Q9Y5W7 946 aa13.95□□□□□ -0.18
VTN-202ENST00000539746 KIAA1551Q9HCM1 1747 aa13.95□□□□□ -0.18
VTN-202ENST00000539746 K7ELQ4 463 aaPredicted RBP13.94□□□□□ -0.18
VTN-202ENST00000539746 BTDP43251 543 aa13.94□□□□□ -0.18
VTN-202ENST00000539746 RBM5P52756 815 aaKnown RBP eCLIP13.94□□□□□ -0.18
VTN-202ENST00000539746 PTH1RQ03431 593 aa13.94□□□□□ -0.18
VTN-202ENST00000539746 SYNE3Q6ZMZ3 975 aa13.94□□□□□ -0.18
VTN-202ENST00000539746 DHX32Q7L7V1 743 aaKnown RBP13.94□□□□□ -0.18
VTN-202ENST00000539746 TEX11Q8IYF3 940 aa13.94□□□□□ -0.18
VTN-202ENST00000539746 DPF2Q92785 391 aa13.94□□□□□ -0.18
VTN-202ENST00000539746 TMEM87BQ96K49 555 aa13.94□□□□□ -0.18
VTN-202ENST00000539746 RIOK1Q9BRS2 568 aaKnown RBP13.94□□□□□ -0.18
VTN-202ENST00000539746 TRIM34Q9BYJ4 488 aa13.94□□□□□ -0.18
VTN-202ENST00000539746 ARMT1Q9H993 441 aa13.94□□□□□ -0.18
VTN-202ENST00000539746 CWC22Q9HCG8 908 aaKnown RBP13.94□□□□□ -0.18
VTN-202ENST00000539746 ZSWIM6Q9HCJ5 1215 aa13.94□□□□□ -0.18
VTN-202ENST00000539746 ZNF277Q9NRM2 450 aaPredicted RBP13.94□□□□□ -0.18
VTN-202ENST00000539746 PDRG1Q9NUG6 133 aa13.94□□□□□ -0.18
VTN-202ENST00000539746 AATFQ9NY61 560 aaKnown RBP eCLIP13.94□□□□□ -0.18
VTN-202ENST00000539746 COL4A1P02462 1669 aa13.94□□□□□ -0.18
VTN-202ENST00000539746 USP17L8P0C7I0 530 aa13.93□□□□□ -0.18
VTN-202ENST00000539746 TNNI2P48788 182 aa13.93□□□□□ -0.18
VTN-202ENST00000539746 DLGAP5Q15398 846 aa13.93□□□□□ -0.18
VTN-202ENST00000539746 FKBP1CQ5VVH2 108 aa13.93□□□□□ -0.18
VTN-202ENST00000539746 ARHGAP27Q6ZUM4 889 aa13.93□□□□□ -0.18
VTN-202ENST00000539746 IQCA1Q86XH1 822 aa13.93□□□□□ -0.18
VTN-202ENST00000539746 FBXL16Q8N461 479 aa13.93□□□□□ -0.18
VTN-202ENST00000539746 MIGA1Q8NAN2 632 aa13.93□□□□□ -0.18
VTN-202ENST00000539746 SYT17Q9BSW7 474 aa13.93□□□□□ -0.18
VTN-202ENST00000539746 LIMCH1Q9UPQ0 1083 aa13.93□□□□□ -0.18
VTN-202ENST00000539746 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.93□□□□□ -0.18
VTN-202ENST00000539746 ARFGEF1Q9Y6D6 1849 aa13.92□□□□□ -0.18
VTN-202ENST00000539746 POLR3DP05423 398 aaPredicted RBP13.92□□□□□ -0.18
VTN-202ENST00000539746 CRKP46108 304 aa13.92□□□□□ -0.18
VTN-202ENST00000539746 PPP2R5BQ15173 497 aa13.92□□□□□ -0.18
VTN-202ENST00000539746 AKNAD1Q5T1N1 836 aa13.92□□□□□ -0.18
VTN-202ENST00000539746 DPY19L2Q6NUT2 758 aa13.92□□□□□ -0.18
VTN-202ENST00000539746 CPLX2Q6PUV4 134 aaKnown RBP13.92□□□□□ -0.18
VTN-202ENST00000539746 CCDC129Q6ZRS4 1044 aa13.92□□□□□ -0.18
VTN-202ENST00000539746 LCORLQ8N3X6 602 aa13.92□□□□□ -0.18
VTN-202ENST00000539746 MTMR14Q8NCE2 650 aa13.92□□□□□ -0.18
VTN-202ENST00000539746 STAG1Q8WVM7 1258 aa13.92□□□□□ -0.18
VTN-202ENST00000539746 SEC62Q99442 399 aaKnown RBP13.92□□□□□ -0.18
VTN-202ENST00000539746 SWAP70Q9UH65 585 aa13.92□□□□□ -0.18
VTN-202ENST00000539746 GSG1L2A8MUP6 293 aa13.91□□□□□ -0.18
VTN-202ENST00000539746 H7C1D1 291 aa13.91□□□□□ -0.18
VTN-202ENST00000539746 CYP21A2P08686 494 aa13.91□□□□□ -0.18
VTN-202ENST00000539746 RPS6KB1P23443 525 aa13.91□□□□□ -0.18
VTN-202ENST00000539746 PPARAQ07869 468 aa13.91□□□□□ -0.18
VTN-202ENST00000539746 INTS4Q96HW7 963 aaKnown RBP13.91□□□□□ -0.18
VTN-202ENST00000539746 GPR101Q96P66 508 aaPredicted RBP13.91□□□□□ -0.18
VTN-202ENST00000539746 UBAC1Q9BSL1 405 aa13.91□□□□□ -0.18
VTN-202ENST00000539746 MCM9Q9NXL9 1143 aa13.91□□□□□ -0.18
VTN-202ENST00000539746 DAGLAQ9Y4D2 1042 aa13.91□□□□□ -0.18
VTN-202ENST00000539746 CACNA1SQ13698 1873 aa13.91□□□□□ -0.18
VTN-202ENST00000539746 E7EWF7 191 aa13.9□□□□□ -0.18
VTN-202ENST00000539746 ENTPD3O75355 529 aa13.9□□□□□ -0.18
VTN-202ENST00000539746 LMOD1P29536 600 aaPredicted RBP13.9□□□□□ -0.18
VTN-202ENST00000539746 RCAN1P53805 252 aa13.9□□□□□ -0.18
VTN-202ENST00000539746 GPC2Q8N158 579 aa13.9□□□□□ -0.18
VTN-202ENST00000539746 MKNK2Q9HBH9 465 aa13.9□□□□□ -0.18
VTN-202ENST00000539746 DCP1AQ9NPI6 582 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms