RNA–Protein interactions for RNA: ENST00000539019.1

SSPN-206, Transcript of sarcospan, humanhuman

TSL 1 (best)

Gene SSPN, Length 1,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-206ENST00000539019 TRAK1Q9UPV9 953 aa8.54□□□□□ -1.04
SSPN-206ENST00000539019 COBLO75128 1261 aa8.53□□□□□ -1.04
SSPN-206ENST00000539019 ZNF157P51786 506 aaPredicted RBP8.53□□□□□ -1.04
SSPN-206ENST00000539019 PLCB3Q01970 1234 aa8.53□□□□□ -1.04
SSPN-206ENST00000539019 SHKBP1Q8TBC3 707 aa8.53□□□□□ -1.04
SSPN-206ENST00000539019 FBLIM1Q8WUP2 373 aa8.53□□□□□ -1.04
SSPN-206ENST00000539019 CORO1BQ9BR76 489 aa8.53□□□□□ -1.04
SSPN-206ENST00000539019 GRIN2BQ13224 1484 aa8.53□□□□□ -1.04
SSPN-206ENST00000539019 FAAP100Q0VG06 881 aa8.52□□□□□ -1.05
SSPN-206ENST00000539019 NFKBIBQ15653 356 aa8.52□□□□□ -1.05
SSPN-206ENST00000539019 RPS26P11Q5JNZ5 115 aaPredicted RBP8.52□□□□□ -1.05
SSPN-206ENST00000539019 MFSD14AQ96MC6 490 aa8.52□□□□□ -1.05
SSPN-206ENST00000539019 ZFYVE1Q9HBF4 777 aa8.52□□□□□ -1.05
SSPN-206ENST00000539019 RAD18Q9NS91 495 aa8.52□□□□□ -1.05
SSPN-206ENST00000539019 NLRP2Q9NX02 1062 aa8.52□□□□□ -1.05
SSPN-206ENST00000539019 IVNS1ABPQ9Y6Y0 642 aa8.52□□□□□ -1.05
SSPN-206ENST00000539019 FAM95CA0A1B0GW59 222 aa8.51□□□□□ -1.05
SSPN-206ENST00000539019 WDR64B1ANS9 1081 aa8.51□□□□□ -1.05
SSPN-206ENST00000539019 TREHO43280 583 aa8.51□□□□□ -1.05
SSPN-206ENST00000539019 ADH5P11766 374 aa8.51□□□□□ -1.05
SSPN-206ENST00000539019 AKAP4Q5JQC9 854 aa8.51□□□□□ -1.05
SSPN-206ENST00000539019 FCGRTP55899 365 aa8.5□□□□□ -1.05
SSPN-206ENST00000539019 HP1BP3Q5SSJ5 553 aaPredicted RBP8.5□□□□□ -1.05
SSPN-206ENST00000539019 DTHD1Q6ZMT9 781 aa8.5□□□□□ -1.05
SSPN-206ENST00000539019 BCO2Q9BYV7 579 aa8.5□□□□□ -1.05
SSPN-206ENST00000539019 PPP4R2Q9NY27 417 aa8.5□□□□□ -1.05
SSPN-206ENST00000539019 ERICH3Q5RHP9 1530 aa8.5□□□□□ -1.05
SSPN-206ENST00000539019 SNAPC4Q5SXM2 1469 aa8.5□□□□□ -1.05
SSPN-206ENST00000539019 MAGI1Q96QZ7 1491 aaPredicted RBP8.5□□□□□ -1.05
SSPN-206ENST00000539019 KIF27Q86VH2 1401 aa8.5□□□□□ -1.05
SSPN-206ENST00000539019 PNMA6FA0A0J9YX94 578 aa8.49□□□□□ -1.05
SSPN-206ENST00000539019 AP3B2Q13367 1082 aa8.49□□□□□ -1.05
SSPN-206ENST00000539019 SHISA5Q8N114 240 aa8.49□□□□□ -1.05
SSPN-206ENST00000539019 ACTL7BQ9Y614 415 aa8.49□□□□□ -1.05
SSPN-206ENST00000539019 F13BP05160 661 aa8.48□□□□□ -1.05
SSPN-206ENST00000539019 KCNA1Q09470 495 aa8.48□□□□□ -1.05
SSPN-206ENST00000539019 PDE3AQ14432 1141 aa8.48□□□□□ -1.05
SSPN-206ENST00000539019 ENOX2Q16206 610 aaKnown RBP8.48□□□□□ -1.05
SSPN-206ENST00000539019 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.48□□□□□ -1.05
SSPN-206ENST00000539019 INTS5Q6P9B9 1019 aaKnown RBP8.48□□□□□ -1.05
SSPN-206ENST00000539019 PAOXQ6QHF9 649 aa8.48□□□□□ -1.05
SSPN-206ENST00000539019 DYMQ7RTS9 669 aa8.48□□□□□ -1.05
SSPN-206ENST00000539019 FBXL6Q8N531 539 aa8.48□□□□□ -1.05
SSPN-206ENST00000539019 EZH1Q92800 747 aaPredicted RBP8.48□□□□□ -1.05
SSPN-206ENST00000539019 KIAA1324LA8MWY0 1029 aaPredicted RBP8.48□□□□□ -1.05
SSPN-206ENST00000539019 AOC2O75106 756 aa8.48□□□□□ -1.05
SSPN-206ENST00000539019 GRIK1P39086 918 aa8.48□□□□□ -1.05
SSPN-206ENST00000539019 NXPE4Q6UWF7 544 aa8.48□□□□□ -1.05
SSPN-206ENST00000539019 WDR18Q9BV38 432 aa8.48□□□□□ -1.05
SSPN-206ENST00000539019 YIPF2Q9BWQ6 316 aa8.48□□□□□ -1.05
SSPN-206ENST00000539019 ZC3H12CQ9C0D7 883 aaKnown RBP8.48□□□□□ -1.05
SSPN-206ENST00000539019 ATG3Q9NT62 314 aa8.48□□□□□ -1.05
SSPN-206ENST00000539019 SYNJ2O15056 1496 aa8.47□□□□□ -1.05
SSPN-206ENST00000539019 PRXQ9BXM0 1461 aa8.47□□□□□ -1.05
SSPN-206ENST00000539019 FHAD1B1AJZ9 1412 aa8.47□□□□□ -1.05
SSPN-206ENST00000539019 NFICP08651 508 aa8.47□□□□□ -1.05
SSPN-206ENST00000539019 LIG1P18858 919 aa8.47□□□□□ -1.05
SSPN-206ENST00000539019 WDR89Q96FK6 387 aaPredicted RBP8.47□□□□□ -1.05
SSPN-206ENST00000539019 FAM105AQ9NUU6 356 aa8.47□□□□□ -1.05
SSPN-206ENST00000539019 AP4E1Q9UPM8 1137 aa8.47□□□□□ -1.05
SSPN-206ENST00000539019 NUP160Q12769 1436 aa8.46□□□□□ -1.05
SSPN-206ENST00000539019 HOXA10P31260 410 aaPredicted RBP8.46□□□□□ -1.06
SSPN-206ENST00000539019 ADMP35318 185 aa8.46□□□□□ -1.06
SSPN-206ENST00000539019 ASPAP45381 313 aa8.46□□□□□ -1.06
SSPN-206ENST00000539019 GIMAP7Q8NHV1 300 aa8.46□□□□□ -1.06
SSPN-206ENST00000539019 TRAIPQ9BWF2 469 aa8.46□□□□□ -1.06
SSPN-206ENST00000539019 GSX1Q9H4S2 264 aaPredicted RBP8.46□□□□□ -1.06
SSPN-206ENST00000539019 CCDC86Q9H6F5 360 aaKnown RBP8.46□□□□□ -1.06
SSPN-206ENST00000539019 PRKAG2Q9UGJ0 569 aa8.46□□□□□ -1.06
SSPN-206ENST00000539019 PPP1R9AQ9ULJ8 1098 aa8.46□□□□□ -1.06
SSPN-206ENST00000539019 AKAP2Q9Y2D5 859 aa8.46□□□□□ -1.06
SSPN-206ENST00000539019 ADAMTS12P58397 1594 aa8.45□□□□□ -1.06
SSPN-206ENST00000539019 XRCC5P13010 732 aaKnown RBP8.45□□□□□ -1.06
SSPN-206ENST00000539019 RAB6AP20340 208 aa8.45□□□□□ -1.06
SSPN-206ENST00000539019 MAPK8P45983 427 aa8.45□□□□□ -1.06
SSPN-206ENST00000539019 ZSCAN29Q8IWY8 852 aaPredicted RBP8.45□□□□□ -1.06
SSPN-206ENST00000539019 TBC1D32Q96NH3 1257 aa8.45□□□□□ -1.06
SSPN-206ENST00000539019 OSBPL1AQ9BXW6 950 aa8.45□□□□□ -1.06
SSPN-206ENST00000539019 TMEM39AQ9NV64 488 aa8.45□□□□□ -1.06
SSPN-206ENST00000539019 PIM2Q9P1W9 311 aa8.45□□□□□ -1.06
SSPN-206ENST00000539019 GPN3Q9UHW5 284 aaPredicted RBP8.45□□□□□ -1.06
SSPN-206ENST00000539019 CARMIL1Q5VZK9 1371 aa8.44□□□□□ -1.06
SSPN-206ENST00000539019 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.44□□□□□ -1.06
SSPN-206ENST00000539019 ADAMTS4O75173 837 aa8.44□□□□□ -1.06
SSPN-206ENST00000539019 SPINK2P20155 84 aa8.44□□□□□ -1.06
SSPN-206ENST00000539019 PPP2R3AQ06190 1150 aa8.44□□□□□ -1.06
SSPN-206ENST00000539019 ASB16Q96NS5 453 aa8.44□□□□□ -1.06
SSPN-206ENST00000539019 SETDB2Q96T68 719 aa8.44□□□□□ -1.06
SSPN-206ENST00000539019 SEMA6CQ9H3T2 930 aa8.44□□□□□ -1.06
SSPN-206ENST00000539019 ACSS3Q9H6R3 686 aa8.44□□□□□ -1.06
SSPN-206ENST00000539019 LEMD3Q9Y2U8 911 aa8.44□□□□□ -1.06
SSPN-206ENST00000539019 GRIN2AQ12879 1464 aa8.43□□□□□ -1.06
SSPN-206ENST00000539019 SYNGAP1Q96PV0 1343 aa8.43□□□□□ -1.06
SSPN-206ENST00000539019 ZNF862O60290 1169 aa8.43□□□□□ -1.06
SSPN-206ENST00000539019 GSTP1P09211 210 aaKnown RBP8.43□□□□□ -1.06
SSPN-206ENST00000539019 FMR1Q06787 632 aaKnown RBP eCLIP8.43□□□□□ -1.06
SSPN-206ENST00000539019 MAP7Q14244 749 aa8.43□□□□□ -1.06
SSPN-206ENST00000539019 ZAR1Q86SH2 424 aa8.43□□□□□ -1.06
SSPN-206ENST00000539019 DTX1Q86Y01 620 aa8.43□□□□□ -1.06
SSPN-206ENST00000539019 GATA6Q92908 595 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms