RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 SGMS1Q86VZ5 419 aa18.29■□□□□ 0.52
MKS1-204ENST00000537529 MIGA1Q8NAN2 632 aa18.29■□□□□ 0.52
MKS1-204ENST00000537529 FBXO18Q8NFZ0 1043 aa18.29■□□□□ 0.52
MKS1-204ENST00000537529 IGDCC4Q8TDY8 1250 aa18.29■□□□□ 0.52
MKS1-204ENST00000537529 STAG1Q8WVM7 1258 aa18.29■□□□□ 0.52
MKS1-204ENST00000537529 LY9Q9HBG7 655 aa18.29■□□□□ 0.52
MKS1-204ENST00000537529 COL1A1P02452 1464 aaPredicted RBP18.28■□□□□ 0.52
MKS1-204ENST00000537529 SEMA3EO15041 775 aa18.28■□□□□ 0.52
MKS1-204ENST00000537529 ZBTB43O43298 467 aa18.28■□□□□ 0.52
MKS1-204ENST00000537529 LIFRP42702 1097 aa18.28■□□□□ 0.52
MKS1-204ENST00000537529 RPS8P62241 208 aaKnown RBP18.28■□□□□ 0.52
MKS1-204ENST00000537529 TPTE2Q6XPS3 522 aa18.28■□□□□ 0.52
MKS1-204ENST00000537529 RBM43Q6ZSC3 357 aaKnown RBP18.28■□□□□ 0.52
MKS1-204ENST00000537529 BRAPQ7Z569 592 aa18.28■□□□□ 0.52
MKS1-204ENST00000537529 ANKRD2Q9GZV1 360 aa18.28■□□□□ 0.52
MKS1-204ENST00000537529 ABCF2Q9UG63 623 aa18.28■□□□□ 0.52
MKS1-204ENST00000537529 MAGEB6P1A0A0J9YX57 407 aa18.27■□□□□ 0.52
MKS1-204ENST00000537529 KDM4AO75164 1064 aa18.27■□□□□ 0.52
MKS1-204ENST00000537529 NR1I2O75469 434 aa18.27■□□□□ 0.52
MKS1-204ENST00000537529 TYRO3Q06418 890 aa18.27■□□□□ 0.52
MKS1-204ENST00000537529 NKX2-3Q8TAU0 364 aa18.27■□□□□ 0.52
MKS1-204ENST00000537529 RNF41Q9H4P4 317 aaPredicted RBP18.27■□□□□ 0.52
MKS1-204ENST00000537529 NOL7Q9UMY1 257 aaKnown RBP18.27■□□□□ 0.52
MKS1-204ENST00000537529 GOLGA8AA7E2F4 631 aa18.27■□□□□ 0.51
MKS1-204ENST00000537529 IFIT3O14879 490 aaKnown RBP18.27■□□□□ 0.51
MKS1-204ENST00000537529 FTOQ9C0B1 505 aaKnown RBP eCLIP18.27■□□□□ 0.51
MKS1-204ENST00000537529 RTEL1Q9NZ71 1219 aa18.27■□□□□ 0.51
MKS1-204ENST00000537529 USP25Q9UHP3 1055 aa18.27■□□□□ 0.51
MKS1-204ENST00000537529 CCDC69A6NI79 296 aa18.26■□□□□ 0.51
MKS1-204ENST00000537529 SART3Q15020 963 aaKnown RBP18.26■□□□□ 0.51
MKS1-204ENST00000537529 MEX3CQ5U5Q3 659 aaKnown RBP18.26■□□□□ 0.51
MKS1-204ENST00000537529 CCDC73Q6ZRK6 1079 aa18.26■□□□□ 0.51
MKS1-204ENST00000537529 MICU3Q86XE3 530 aa18.26■□□□□ 0.51
MKS1-204ENST00000537529 FAM84BQ96KN1 310 aaPredicted RBP18.26■□□□□ 0.51
MKS1-204ENST00000537529 MTA3Q9BTC8 594 aa18.26■□□□□ 0.51
MKS1-204ENST00000537529 ZSWIM5Q9P217 1185 aa18.26■□□□□ 0.51
MKS1-204ENST00000537529 PDS5AQ29RF7 1337 aaKnown RBP18.26■□□□□ 0.51
MKS1-204ENST00000537529 PTMAP06454 111 aaKnown RBP18.26■□□□□ 0.51
MKS1-204ENST00000537529 OTUD7BQ6GQQ9 843 aa18.26■□□□□ 0.51
MKS1-204ENST00000537529 SYNE3Q6ZMZ3 975 aa18.26■□□□□ 0.51
MKS1-204ENST00000537529 FBXO33Q7Z6M2 555 aa18.26■□□□□ 0.51
MKS1-204ENST00000537529 CCAR1Q8IX12 1150 aaKnown RBP18.26■□□□□ 0.51
MKS1-204ENST00000537529 FAM200AQ8TCP9 573 aa18.26■□□□□ 0.51
MKS1-204ENST00000537529 ARHGEF1Q92888 912 aaKnown RBP18.26■□□□□ 0.51
MKS1-204ENST00000537529 SLC12A7Q9Y666 1083 aa18.26■□□□□ 0.51
MKS1-204ENST00000537529 LY75O60449 1722 aa18.25■□□□□ 0.51
MKS1-204ENST00000537529 ME1P48163 572 aa18.25■□□□□ 0.51
MKS1-204ENST00000537529 CKAP2LQ8IYA6 745 aa18.25■□□□□ 0.51
MKS1-204ENST00000537529 GJD4Q96KN9 370 aaPredicted RBP18.25■□□□□ 0.51
MKS1-204ENST00000537529 ALG1Q9BT22 464 aa18.25■□□□□ 0.51
MKS1-204ENST00000537529 SENP2Q9HC62 589 aa18.25■□□□□ 0.51
MKS1-204ENST00000537529 INCENPQ9NQS7 918 aa18.25■□□□□ 0.51
MKS1-204ENST00000537529 TOMM22Q9NS69 142 aa18.25■□□□□ 0.51
MKS1-204ENST00000537529 MRVI1Q9Y6F6 885 aa18.25■□□□□ 0.51
MKS1-204ENST00000537529 CHD4Q14839 1912 aa18.25■□□□□ 0.51
MKS1-204ENST00000537529 NID2Q14112 1375 aa18.24■□□□□ 0.51
MKS1-204ENST00000537529 CTAGE5O15320 804 aa18.24■□□□□ 0.51
MKS1-204ENST00000537529 PPARAQ07869 468 aa18.24■□□□□ 0.51
MKS1-204ENST00000537529 RRP12Q5JTH9 1297 aaKnown RBP18.24■□□□□ 0.51
MKS1-204ENST00000537529 FAM182BQ5T319 152 aa18.24■□□□□ 0.51
MKS1-204ENST00000537529 ADGRA1Q86SQ6 560 aa18.24■□□□□ 0.51
MKS1-204ENST00000537529 TACC3Q9Y6A5 838 aa18.24■□□□□ 0.51
MKS1-204ENST00000537529 ADCY5O95622 1261 aa18.24■□□□□ 0.51
MKS1-204ENST00000537529 CDC27P30260 824 aa18.24■□□□□ 0.51
MKS1-204ENST00000537529 SASS6Q6UVJ0 657 aa18.24■□□□□ 0.51
MKS1-204ENST00000537529 ZKSCAN5Q9Y2L8 839 aa18.24■□□□□ 0.51
MKS1-204ENST00000537529 STK36Q9NRP7 1315 aa18.23■□□□□ 0.51
MKS1-204ENST00000537529 ERICH2A1L162 156 aa18.23■□□□□ 0.51
MKS1-204ENST00000537529 WTIPA6NIX2 430 aaPredicted RBP18.23■□□□□ 0.51
MKS1-204ENST00000537529 NPHP1O15259 732 aa18.23■□□□□ 0.51
MKS1-204ENST00000537529 YEATS4O95619 227 aa18.23■□□□□ 0.51
MKS1-204ENST00000537529 RXRAP19793 462 aa18.23■□□□□ 0.51
MKS1-204ENST00000537529 RFC4P35249 363 aa18.23■□□□□ 0.51
MKS1-204ENST00000537529 IARSP41252 1262 aaKnown RBP18.23■□□□□ 0.51
MKS1-204ENST00000537529 KIF23Q02241 960 aaPredicted RBP18.23■□□□□ 0.51
MKS1-204ENST00000537529 MYSM1Q5VVJ2 828 aa18.23■□□□□ 0.51
MKS1-204ENST00000537529 KCNG4Q8TDN1 519 aa18.23■□□□□ 0.51
MKS1-204ENST00000537529 POLR3EQ9NVU0 708 aa18.23■□□□□ 0.51
MKS1-204ENST00000537529 ANAPC4Q9UJX5 808 aa18.23■□□□□ 0.51
MKS1-204ENST00000537529 TAF1P21675 1872 aa18.23■□□□□ 0.51
MKS1-204ENST00000537529 TAF1LQ8IZX4 1826 aa18.23■□□□□ 0.51
MKS1-204ENST00000537529 WTAPQ15007 396 aa18.22■□□□□ 0.51
MKS1-204ENST00000537529 STK38Q15208 465 aa18.22■□□□□ 0.51
MKS1-204ENST00000537529 TMTC2Q8N394 836 aa18.22■□□□□ 0.51
MKS1-204ENST00000537529 RIOK1Q9BRS2 568 aaKnown RBP18.22■□□□□ 0.51
MKS1-204ENST00000537529 FAM160A1Q05DH4 1040 aa18.22■□□□□ 0.51
MKS1-204ENST00000537529 TRAPPC3LQ5T215 181 aa18.22■□□□□ 0.51
MKS1-204ENST00000537529 CCDC144CPQ8IYA2 1237 aa18.22■□□□□ 0.51
MKS1-204ENST00000537529 FSIP1Q8NA03 581 aa18.22■□□□□ 0.51
MKS1-204ENST00000537529 BRIP1Q9BX63 1249 aa18.22■□□□□ 0.51
MKS1-204ENST00000537529 GOLPH3LQ9H4A5 285 aa18.22■□□□□ 0.51
MKS1-204ENST00000537529 CACNA1SQ13698 1873 aa18.22■□□□□ 0.51
MKS1-204ENST00000537529 A0A1W2PQ27 194 aa18.21■□□□□ 0.51
MKS1-204ENST00000537529 A0A1W2PQ64 194 aa18.21■□□□□ 0.51
MKS1-204ENST00000537529 A0A1W2PQD8 194 aa18.21■□□□□ 0.51
MKS1-204ENST00000537529 KINO60870 393 aaKnown RBP18.21■□□□□ 0.51
MKS1-204ENST00000537529 POLR3DP05423 398 aaPredicted RBP18.21■□□□□ 0.51
MKS1-204ENST00000537529 HIBADHP31937 336 aaKnown RBP18.21■□□□□ 0.51
MKS1-204ENST00000537529 RCAN1P53805 252 aa18.21■□□□□ 0.51
MKS1-204ENST00000537529 TRIM29Q14134 588 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms