RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 CDC42EP5Q6NZY7 148 aa14.64□□□□□ -0.07
CHD4-203ENST00000535717 CDC37L1Q7L3B6 337 aa14.64□□□□□ -0.07
CHD4-203ENST00000535717 ADGRA1Q86SQ6 560 aa14.64□□□□□ -0.07
CHD4-203ENST00000535717 SULF1Q8IWU6 871 aa14.64□□□□□ -0.07
CHD4-203ENST00000535717 MAGEB6Q8N7X4 407 aa14.64□□□□□ -0.07
CHD4-203ENST00000535717 OSBPL3Q9H4L5 887 aa14.64□□□□□ -0.07
CHD4-203ENST00000535717 PDE6AP16499 860 aa14.63□□□□□ -0.07
CHD4-203ENST00000535717 CYP7A1P22680 504 aa14.63□□□□□ -0.07
CHD4-203ENST00000535717 BTDP43251 543 aa14.63□□□□□ -0.07
CHD4-203ENST00000535717 CACNB3P54284 484 aa14.63□□□□□ -0.07
CHD4-203ENST00000535717 C1QTNF8P60827 252 aa14.63□□□□□ -0.07
CHD4-203ENST00000535717 FMR1Q06787 632 aaKnown RBP eCLIP14.63□□□□□ -0.072e-7■□□□□ 9.4
CHD4-203ENST00000535717 SLC9C2Q5TAH2 1124 aa14.63□□□□□ -0.07
CHD4-203ENST00000535717 APOBEC3FQ8IUX4 373 aaKnown RBP14.63□□□□□ -0.07
CHD4-203ENST00000535717 VEZTQ9HBM0 779 aa14.63□□□□□ -0.07
CHD4-203ENST00000535717 USP40Q9NVE5 1235 aa14.63□□□□□ -0.07
CHD4-203ENST00000535717 GTF3C3Q9Y5Q9 886 aa14.63□□□□□ -0.07
CHD4-203ENST00000535717 PASKQ96RG2 1323 aa14.63□□□□□ -0.07
CHD4-203ENST00000535717 TCRBV5S4A2TA0A5A2 114 aa14.62□□□□□ -0.07
CHD4-203ENST00000535717 TMED8Q6PL24 325 aaPredicted RBP14.62□□□□□ -0.07
CHD4-203ENST00000535717 KBTBD3Q8NAB2 608 aa14.62□□□□□ -0.07
CHD4-203ENST00000535717 TCP10L2B9ZVM9 353 aa14.61□□□□□ -0.07
CHD4-203ENST00000535717 CHGBP05060 677 aa14.61□□□□□ -0.07
CHD4-203ENST00000535717 ADD2P35612 726 aa14.61□□□□□ -0.07
CHD4-203ENST00000535717 RHBDL3P58872 404 aa14.61□□□□□ -0.07
CHD4-203ENST00000535717 PPP4CP60510 307 aa14.61□□□□□ -0.07
CHD4-203ENST00000535717 SLFNL1Q499Z3 407 aa14.61□□□□□ -0.07
CHD4-203ENST00000535717 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.61□□□□□ -0.07
CHD4-203ENST00000535717 DEFB129Q9H1M3 183 aa14.61□□□□□ -0.07
CHD4-203ENST00000535717 ZNF532Q9HCE3 1301 aa14.61□□□□□ -0.07
CHD4-203ENST00000535717 DYNLL1P63167 89 aaKnown RBP14.6□□□□□ -0.07
CHD4-203ENST00000535717 NFIAQ12857 509 aa14.6□□□□□ -0.07
CHD4-203ENST00000535717 RASA3Q14644 834 aa14.6□□□□□ -0.07
CHD4-203ENST00000535717 FKBP1CQ5VVH2 108 aa14.6□□□□□ -0.07
CHD4-203ENST00000535717 PRAMEF18Q5VWM3 479 aa14.6□□□□□ -0.07
CHD4-203ENST00000535717 SKAP1Q86WV1 359 aa14.6□□□□□ -0.07
CHD4-203ENST00000535717 MIGA1Q8NAN2 632 aa14.6□□□□□ -0.07
CHD4-203ENST00000535717 SH3RF3Q8TEJ3 882 aaPredicted RBP14.6□□□□□ -0.07
CHD4-203ENST00000535717 CDCA5Q96FF9 252 aa14.6□□□□□ -0.07
CHD4-203ENST00000535717 NOL10Q9BSC4 688 aaKnown RBP14.6□□□□□ -0.07
CHD4-203ENST00000535717 AATFQ9NY61 560 aaKnown RBP eCLIP14.6□□□□□ -0.07
CHD4-203ENST00000535717 TMOD2Q9NZR1 351 aa14.6□□□□□ -0.07
CHD4-203ENST00000535717 CNTNAP1P78357 1384 aa14.6□□□□□ -0.07
CHD4-203ENST00000535717 MYH7P12883 1935 aa14.59□□□□□ -0.07
CHD4-203ENST00000535717 WDHD1O75717 1129 aaPredicted RBP14.59□□□□□ -0.07
CHD4-203ENST00000535717 BAG3O95817 575 aa14.59□□□□□ -0.07
CHD4-203ENST00000535717 TNFAIP1Q13829 316 aa14.59□□□□□ -0.07
CHD4-203ENST00000535717 UBE3CQ15386 1083 aa14.59□□□□□ -0.07
CHD4-203ENST00000535717 ZSCAN25Q6NSZ9 544 aa14.59□□□□□ -0.07
CHD4-203ENST00000535717 EVI5LQ96CN4 794 aa14.59□□□□□ -0.07
CHD4-203ENST00000535717 FAM198AQ9UFP1 575 aa14.59□□□□□ -0.07
CHD4-203ENST00000535717 RFX7Q2KHR2 1363 aa14.59□□□□□ -0.07
CHD4-203ENST00000535717 RNF113AO15541 343 aaKnown RBP14.58□□□□□ -0.08
CHD4-203ENST00000535717 TNNI2P48788 182 aa14.58□□□□□ -0.08
CHD4-203ENST00000535717 CST9Q5W186 159 aa14.58□□□□□ -0.08
CHD4-203ENST00000535717 FAM83AQ86UY5 434 aa14.58□□□□□ -0.08
CHD4-203ENST00000535717 FSD1Q9BTV5 496 aa14.58□□□□□ -0.08
CHD4-203ENST00000535717 IDI2Q9BXS1 227 aa14.58□□□□□ -0.08
CHD4-203ENST00000535717 TMEM39BQ9GZU3 492 aa14.58□□□□□ -0.08
CHD4-203ENST00000535717 PPP2R3BQ9Y5P8 575 aa14.58□□□□□ -0.08
CHD4-203ENST00000535717 MAGEB6P1A0A0J9YX57 407 aa14.57□□□□□ -0.08
CHD4-203ENST00000535717 TRIM6-TRIM34B2RNG4 842 aa14.57□□□□□ -0.08
CHD4-203ENST00000535717 CELF2O95319 508 aaKnown RBP14.57□□□□□ -0.08
CHD4-203ENST00000535717 GSPT1P15170 499 aaKnown RBP14.57□□□□□ -0.08
CHD4-203ENST00000535717 PLCG2P16885 1265 aa14.57□□□□□ -0.08
CHD4-203ENST00000535717 RGS3P49796 1198 aa14.57□□□□□ -0.08
CHD4-203ENST00000535717 APLP1P51693 650 aa14.57□□□□□ -0.08
CHD4-203ENST00000535717 TCP10Q12799 353 aa14.57□□□□□ -0.08
CHD4-203ENST00000535717 TTC22Q5TAA0 569 aa14.57□□□□□ -0.08
CHD4-203ENST00000535717 CDAN1Q8IWY9 1227 aa14.57□□□□□ -0.08
CHD4-203ENST00000535717 ZFPM1Q8IX07 1006 aa14.57□□□□□ -0.08
CHD4-203ENST00000535717 TEX11Q8IYF3 940 aa14.57□□□□□ -0.08
CHD4-203ENST00000535717 RILPL2Q969X0 211 aa14.57□□□□□ -0.08
CHD4-203ENST00000535717 TEPSINQ96N21 525 aa14.57□□□□□ -0.08
CHD4-203ENST00000535717 RIOK1Q9BRS2 568 aaKnown RBP14.57□□□□□ -0.08
CHD4-203ENST00000535717 ZNF408Q9H9D4 720 aa14.57□□□□□ -0.08
CHD4-203ENST00000535717 DDX4Q9NQI0 724 aaKnown RBP14.57□□□□□ -0.08
CHD4-203ENST00000535717 ENTPD3O75355 529 aa14.56□□□□□ -0.08
CHD4-203ENST00000535717 ZFYP08048 801 aaPredicted RBP14.56□□□□□ -0.08
CHD4-203ENST00000535717 PICALMQ13492 652 aa14.56□□□□□ -0.08
CHD4-203ENST00000535717 NBPF12Q5TAG4 269 aaPredicted RBP14.56□□□□□ -0.08
CHD4-203ENST00000535717 FAM151AQ8WW52 585 aa14.56□□□□□ -0.08
CHD4-203ENST00000535717 PUS7LQ9H0K6 701 aaKnown RBP14.56□□□□□ -0.08
CHD4-203ENST00000535717 TRPM7Q96QT4 1865 aa14.56□□□□□ -0.08
CHD4-203ENST00000535717 NPM3O75607 178 aaKnown RBP14.55□□□□□ -0.08
CHD4-203ENST00000535717 MBD4O95243 580 aa14.55□□□□□ -0.08
CHD4-203ENST00000535717 HSPA6P17066 643 aa14.55□□□□□ -0.08
CHD4-203ENST00000535717 LRRFIP1Q32MZ4 808 aaKnown RBP14.55□□□□□ -0.08
CHD4-203ENST00000535717 CERS3Q8IU89 383 aa14.55□□□□□ -0.08
CHD4-203ENST00000535717 LCORLQ8N3X6 602 aa14.55□□□□□ -0.08
CHD4-203ENST00000535717 APPBP2Q92624 585 aa14.55□□□□□ -0.08
CHD4-203ENST00000535717 OSBP2Q969R2 916 aa14.55□□□□□ -0.08
CHD4-203ENST00000535717 ARMT1Q9H993 441 aa14.55□□□□□ -0.08
CHD4-203ENST00000535717 SSC5DA1L4H1 1573 aa14.55□□□□□ -0.08
CHD4-203ENST00000535717 TMEM88BA6NKF7 163 aa14.54□□□□□ -0.08
CHD4-203ENST00000535717 SDSP20132 328 aa14.54□□□□□ -0.08
CHD4-203ENST00000535717 SUPT20HL1Q3ZLR7 823 aa14.54□□□□□ -0.08
CHD4-203ENST00000535717 ZMYM1Q5SVZ6 1142 aa14.54□□□□□ -0.08
CHD4-203ENST00000535717 SH3BP5LQ7L8J4 393 aa14.54□□□□□ -0.08
CHD4-203ENST00000535717 TICAM2Q86XR7 235 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 392.4 ms