RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 CENPQQ7L2Z9 268 aaPredicted RBP29.36■■■□□ 2.29
SIPA1-210ENST00000534406 CCDC136Q96JN2 1154 aa29.36■■■□□ 2.29
SIPA1-210ENST00000534406 BTDP43251 543 aa29.35■■■□□ 2.29
SIPA1-210ENST00000534406 TNFAIP1Q13829 316 aa29.35■■■□□ 2.29
SIPA1-210ENST00000534406 SCAF8Q9UPN6 1271 aaKnown RBP29.35■■■□□ 2.29
SIPA1-210ENST00000534406 MAGEB6Q8N7X4 407 aa29.34■■■□□ 2.29
SIPA1-210ENST00000534406 GPR75-ASB3A0A0A6YYF3 556 aa29.33■■■□□ 2.29
SIPA1-210ENST00000534406 CDC42EP5Q6NZY7 148 aa29.33■■■□□ 2.29
SIPA1-210ENST00000534406 NOL10Q9BSC4 688 aaKnown RBP29.33■■■□□ 2.29
SIPA1-210ENST00000534406 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.33■■■□□ 2.29
SIPA1-210ENST00000534406 CYP7A1P22680 504 aa29.32■■■□□ 2.28
SIPA1-210ENST00000534406 PDE6AP16499 860 aa29.31■■■□□ 2.28
SIPA1-210ENST00000534406 CACNB3P54284 484 aa29.31■■■□□ 2.28
SIPA1-210ENST00000534406 FMR1Q06787 632 aaKnown RBP eCLIP29.31■■■□□ 2.28
SIPA1-210ENST00000534406 PLEKHM2Q8IWE5 1019 aa29.31■■■□□ 2.28
SIPA1-210ENST00000534406 CDCA5Q96FF9 252 aa29.31■■■□□ 2.28
SIPA1-210ENST00000534406 DEFB129Q9H1M3 183 aa29.31■■■□□ 2.28
SIPA1-210ENST00000534406 USP40Q9NVE5 1235 aa29.31■■■□□ 2.28
SIPA1-210ENST00000534406 PPP2R3BQ9Y5P8 575 aa29.31■■■□□ 2.28
SIPA1-210ENST00000534406 TCP10L2B9ZVM9 353 aa29.3■■■□□ 2.28
SIPA1-210ENST00000534406 TNNI2P48788 182 aa29.3■■■□□ 2.28
SIPA1-210ENST00000534406 SLC9C2Q5TAH2 1124 aa29.3■■■□□ 2.28
SIPA1-210ENST00000534406 FKBP1CQ5VVH2 108 aa29.3■■■□□ 2.28
SIPA1-210ENST00000534406 ADGRA1Q86SQ6 560 aa29.3■■■□□ 2.28
SIPA1-210ENST00000534406 BAG3O95817 575 aa29.29■■■□□ 2.28
SIPA1-210ENST00000534406 APLP1P51693 650 aa29.29■■■□□ 2.28
SIPA1-210ENST00000534406 DLK2Q6UY11 383 aa29.29■■■□□ 2.28
SIPA1-210ENST00000534406 KBTBD3Q8NAB2 608 aa29.29■■■□□ 2.28
SIPA1-210ENST00000534406 OSBPL3Q9H4L5 887 aa29.29■■■□□ 2.28
SIPA1-210ENST00000534406 RFX7Q2KHR2 1363 aa29.28■■■□□ 2.28
SIPA1-210ENST00000534406 MAP4K4O95819 1239 aaPredicted RBP29.28■■■□□ 2.28
SIPA1-210ENST00000534406 HSPA6P17066 643 aa29.28■■■□□ 2.28
SIPA1-210ENST00000534406 PDE4AP27815 886 aa29.28■■■□□ 2.28
SIPA1-210ENST00000534406 RASA3Q14644 834 aa29.28■■■□□ 2.28
SIPA1-210ENST00000534406 ZNF408Q9H9D4 720 aa29.28■■■□□ 2.28
SIPA1-210ENST00000534406 AATFQ9NY61 560 aaKnown RBP eCLIP29.28■■■□□ 2.28
SIPA1-210ENST00000534406 CELF2O95319 508 aaKnown RBP29.27■■■□□ 2.28
SIPA1-210ENST00000534406 PLCG2P16885 1265 aa29.27■■■□□ 2.28
SIPA1-210ENST00000534406 ZSCAN25Q6NSZ9 544 aa29.27■■■□□ 2.28
SIPA1-210ENST00000534406 CNTNAP1P78357 1384 aa29.26■■■□□ 2.28
SIPA1-210ENST00000534406 ZNF532Q9HCE3 1301 aa29.26■■■□□ 2.27
SIPA1-210ENST00000534406 ADD2P35612 726 aa29.26■■■□□ 2.27
SIPA1-210ENST00000534406 RHBDL3P58872 404 aa29.26■■■□□ 2.27
SIPA1-210ENST00000534406 FAM83AQ86UY5 434 aa29.26■■■□□ 2.27
SIPA1-210ENST00000534406 PPP4R2Q9NY27 417 aa29.26■■■□□ 2.27
SIPA1-210ENST00000534406 RPAP1Q9BWH6 1393 aaPredicted RBP29.26■■■□□ 2.27
SIPA1-210ENST00000534406 TCRBV5S4A2TA0A5A2 114 aa29.25■■■□□ 2.27
SIPA1-210ENST00000534406 PPP4CP60510 307 aa29.25■■■□□ 2.27
SIPA1-210ENST00000534406 NFIAQ12857 509 aa29.25■■■□□ 2.27
SIPA1-210ENST00000534406 CERS3Q8IU89 383 aa29.25■■■□□ 2.27
SIPA1-210ENST00000534406 TMEM88BA6NKF7 163 aa29.24■■■□□ 2.27
SIPA1-210ENST00000534406 LRRFIP1Q32MZ4 808 aaKnown RBP29.24■■■□□ 2.27
SIPA1-210ENST00000534406 PRAMEF18Q5VWM3 479 aa29.24■■■□□ 2.27
SIPA1-210ENST00000534406 TEX11Q8IYF3 940 aa29.24■■■□□ 2.27
SIPA1-210ENST00000534406 MIGA1Q8NAN2 632 aa29.24■■■□□ 2.27
SIPA1-210ENST00000534406 SH3RF3Q8TEJ3 882 aaPredicted RBP29.24■■■□□ 2.27
SIPA1-210ENST00000534406 CDK5RAP2Q96SN8 1893 aa29.24■■■□□ 2.27
SIPA1-210ENST00000534406 FSD1Q9BTV5 496 aa29.24■■■□□ 2.27
SIPA1-210ENST00000534406 IDI2Q9BXS1 227 aa29.24■■■□□ 2.27
SIPA1-210ENST00000534406 FOCADQ5VW36 1801 aa29.24■■■□□ 2.27
SIPA1-210ENST00000534406 PAPPA2Q9BXP8 1791 aa29.24■■■□□ 2.27
SIPA1-210ENST00000534406 WDHD1O75717 1129 aaPredicted RBP29.23■■■□□ 2.27
SIPA1-210ENST00000534406 NF2P35240 595 aa29.23■■■□□ 2.27
SIPA1-210ENST00000534406 UBE3CQ15386 1083 aa29.23■■■□□ 2.27
SIPA1-210ENST00000534406 EVI5LQ96CN4 794 aa29.23■■■□□ 2.27
SIPA1-210ENST00000534406 TMEM39BQ9GZU3 492 aa29.23■■■□□ 2.27
SIPA1-210ENST00000534406 FAM198AQ9UFP1 575 aa29.23■■■□□ 2.27
SIPA1-210ENST00000534406 AK9Q5TCS8 1911 aa29.23■■■□□ 2.27
SIPA1-210ENST00000534406 ZFYP08048 801 aaPredicted RBP29.22■■■□□ 2.27
SIPA1-210ENST00000534406 RGS3P49796 1198 aa29.22■■■□□ 2.27
SIPA1-210ENST00000534406 CST9Q5W186 159 aa29.22■■■□□ 2.27
SIPA1-210ENST00000534406 CREBZFQ9NS37 354 aa29.22■■■□□ 2.27
SIPA1-210ENST00000534406 ENTPD3O75355 529 aa29.21■■■□□ 2.27
SIPA1-210ENST00000534406 DYNLL1P63167 89 aaKnown RBP29.21■■■□□ 2.27
SIPA1-210ENST00000534406 TCP10Q12799 353 aa29.21■■■□□ 2.27
SIPA1-210ENST00000534406 FAM151AQ8WW52 585 aa29.21■■■□□ 2.27
SIPA1-210ENST00000534406 SSC5DA1L4H1 1573 aa29.21■■■□□ 2.27
SIPA1-210ENST00000534406 MAGEB6P1A0A0J9YX57 407 aa29.2■■■□□ 2.26
SIPA1-210ENST00000534406 PICALMQ13492 652 aa29.2■■■□□ 2.26
SIPA1-210ENST00000534406 SUPT20HL1Q3ZLR7 823 aa29.2■■■□□ 2.26
SIPA1-210ENST00000534406 TEPSINQ96N21 525 aa29.2■■■□□ 2.26
SIPA1-210ENST00000534406 GBA2Q9HCG7 927 aaPredicted RBP29.2■■■□□ 2.26
SIPA1-210ENST00000534406 TRIM6-TRIM34B2RNG4 842 aa29.19■■■□□ 2.26
SIPA1-210ENST00000534406 NPM3O75607 178 aaKnown RBP29.19■■■□□ 2.26
SIPA1-210ENST00000534406 SLFNL1Q499Z3 407 aa29.19■■■□□ 2.26
SIPA1-210ENST00000534406 RIOK1Q9BRS2 568 aaKnown RBP29.19■■■□□ 2.26
SIPA1-210ENST00000534406 DDX4Q9NQI0 724 aaKnown RBP29.19■■■□□ 2.26
SIPA1-210ENST00000534406 RNF113AO15541 343 aaKnown RBP29.18■■■□□ 2.26
SIPA1-210ENST00000534406 CHGBP05060 677 aa29.18■■■□□ 2.26
SIPA1-210ENST00000534406 NBPF12Q5TAG4 269 aaPredicted RBP29.18■■■□□ 2.26
SIPA1-210ENST00000534406 CDAN1Q8IWY9 1227 aa29.18■■■□□ 2.26
SIPA1-210ENST00000534406 C2orf69Q8N8R5 385 aa29.18■■■□□ 2.26
SIPA1-210ENST00000534406 APPBP2Q92624 585 aa29.17■■■□□ 2.26
SIPA1-210ENST00000534406 ABT1Q9ULW3 272 aaKnown RBP29.17■■■□□ 2.26
SIPA1-210ENST00000534406 COL2A1P02458 1487 aaPredicted RBP29.17■■■□□ 2.26
SIPA1-210ENST00000534406 MBD4O95243 580 aa29.16■■■□□ 2.26
SIPA1-210ENST00000534406 FKBP1BP68106 108 aa29.16■■■□□ 2.26
SIPA1-210ENST00000534406 TTC22Q5TAA0 569 aa29.16■■■□□ 2.26
SIPA1-210ENST00000534406 TGFBRAP1Q8WUH2 860 aa29.16■■■□□ 2.26
SIPA1-210ENST00000534406 RILPL2Q969X0 211 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms