RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 KRTAP9-2Q9BYQ4 174 aa4.48□□□□□ -1.69
CHMP4A-208ENST00000534106 POGKQ9P215 609 aa4.48□□□□□ -1.69
CHMP4A-208ENST00000534106 WWC3Q9ULE0 1092 aa4.48□□□□□ -1.69
CHMP4A-208ENST00000534106 SPHKAPQ2M3C7 1700 aa4.48□□□□□ -1.69
CHMP4A-208ENST00000534106 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.48□□□□□ -1.69
CHMP4A-208ENST00000534106 NRKQ7Z2Y5 1582 aa4.48□□□□□ -1.69
CHMP4A-208ENST00000534106 MARF1Q9Y4F3 1742 aaKnown RBP4.47□□□□□ -1.69
CHMP4A-208ENST00000534106 KRTAP9-6A0A140TA67 174 aa4.47□□□□□ -1.69
CHMP4A-208ENST00000534106 RARAP10276 462 aa4.47□□□□□ -1.69
CHMP4A-208ENST00000534106 ARID4AP29374 1257 aaPredicted RBP4.47□□□□□ -1.69
CHMP4A-208ENST00000534106 IDH3AP50213 366 aa4.47□□□□□ -1.69
CHMP4A-208ENST00000534106 MLLT1Q03111 559 aaPredicted RBP4.47□□□□□ -1.69
CHMP4A-208ENST00000534106 DDB1Q16531 1140 aa4.47□□□□□ -1.69
CHMP4A-208ENST00000534106 IER5Q5VY09 327 aa4.47□□□□□ -1.69
CHMP4A-208ENST00000534106 DTWD1Q8N5C7 304 aa4.47□□□□□ -1.69
CHMP4A-208ENST00000534106 ACSBG1Q96GR2 724 aa4.47□□□□□ -1.69
CHMP4A-208ENST00000534106 C14orf93Q9H972 538 aaKnown RBP4.47□□□□□ -1.69
CHMP4A-208ENST00000534106 NAGPAQ9UK23 515 aa4.47□□□□□ -1.69
CHMP4A-208ENST00000534106 TRAK1Q9UPV9 953 aa4.47□□□□□ -1.69
CHMP4A-208ENST00000534106 ATP10DQ9P241 1426 aa4.46□□□□□ -1.69
CHMP4A-208ENST00000534106 TNS1Q9HBL0 1735 aaKnown RBP4.46□□□□□ -1.69
CHMP4A-208ENST00000534106 CROCC2H7BZ55 1655 aa4.46□□□□□ -1.7
CHMP4A-208ENST00000534106 PLCH1Q4KWH8 1693 aa4.46□□□□□ -1.7
CHMP4A-208ENST00000534106 CDC42BPGQ6DT37 1551 aa4.46□□□□□ -1.7
CHMP4A-208ENST00000534106 NRXN1Q9ULB1 1477 aa4.46□□□□□ -1.7
CHMP4A-208ENST00000534106 GPRASP1Q5JY77 1395 aa4.46□□□□□ -1.7
CHMP4A-208ENST00000534106 SASH3O75995 380 aa4.46□□□□□ -1.7
CHMP4A-208ENST00000534106 TARSP26639 723 aaKnown RBP4.46□□□□□ -1.7
CHMP4A-208ENST00000534106 IGF2-ASQ6U949 168 aa4.46□□□□□ -1.7
CHMP4A-208ENST00000534106 HFE2Q6ZVN8 426 aa4.46□□□□□ -1.7
CHMP4A-208ENST00000534106 DHX32Q7L7V1 743 aaKnown RBP4.46□□□□□ -1.7
CHMP4A-208ENST00000534106 FBXO11Q86XK2 927 aa4.46□□□□□ -1.7
CHMP4A-208ENST00000534106 LPIN3Q9BQK8 851 aa4.46□□□□□ -1.7
CHMP4A-208ENST00000534106 SMG9Q9H0W8 520 aaKnown RBP4.46□□□□□ -1.7
CHMP4A-208ENST00000534106 KLK14Q9P0G3 267 aa4.46□□□□□ -1.7
CHMP4A-208ENST00000534106 FRRS1LQ9P0K9 344 aa4.46□□□□□ -1.7
CHMP4A-208ENST00000534106 TFIP11Q9UBB9 837 aaKnown RBP4.46□□□□□ -1.7
CHMP4A-208ENST00000534106 RGPD1P0DJD0 1748 aa4.46□□□□□ -1.7
CHMP4A-208ENST00000534106 SSH2Q76I76 1423 aa4.46□□□□□ -1.7
CHMP4A-208ENST00000534106 PRAG1Q86YV5 1406 aa4.46□□□□□ -1.7
CHMP4A-208ENST00000534106 YTHDC2Q9H6S0 1430 aaKnown RBP4.46□□□□□ -1.7
CHMP4A-208ENST00000534106 THSD7AQ9UPZ6 1657 aa4.45□□□□□ -1.7
CHMP4A-208ENST00000534106 ROCK1Q13464 1354 aa4.45□□□□□ -1.7
CHMP4A-208ENST00000534106 EIF2AK2P19525 551 aaKnown RBP4.45□□□□□ -1.7
CHMP4A-208ENST00000534106 NOS3P29474 1203 aa4.45□□□□□ -1.7
CHMP4A-208ENST00000534106 ARSDP51689 593 aa4.45□□□□□ -1.7
CHMP4A-208ENST00000534106 DPYDQ12882 1025 aa4.45□□□□□ -1.7
CHMP4A-208ENST00000534106 DGKZQ13574 1117 aa4.45□□□□□ -1.7
CHMP4A-208ENST00000534106 PERM1Q5SV97 790 aa4.45□□□□□ -1.7
CHMP4A-208ENST00000534106 ABTB2Q8N961 1025 aa4.45□□□□□ -1.7
CHMP4A-208ENST00000534106 NUDT16Q96DE0 195 aaKnown RBP4.45□□□□□ -1.7
CHMP4A-208ENST00000534106 PCMTD2Q9NV79 361 aa4.45□□□□□ -1.7
CHMP4A-208ENST00000534106 RNF112Q9ULX5 631 aa4.45□□□□□ -1.7
CHMP4A-208ENST00000534106 CLTCL1P53675 1640 aa4.45□□□□□ -1.7
CHMP4A-208ENST00000534106 RRBP1Q9P2E9 1410 aaKnown RBP4.45□□□□□ -1.7
CHMP4A-208ENST00000534106 MYOM1P52179 1685 aa4.45□□□□□ -1.7
CHMP4A-208ENST00000534106 NUP188Q5SRE5 1749 aa4.44□□□□□ -1.7
CHMP4A-208ENST00000534106 ZBTB42B2RXF5 422 aa4.44□□□□□ -1.7
CHMP4A-208ENST00000534106 DKK1O94907 266 aa4.44□□□□□ -1.7
CHMP4A-208ENST00000534106 GHRHP01286 108 aa4.44□□□□□ -1.7
CHMP4A-208ENST00000534106 GCP02774 474 aa4.44□□□□□ -1.7
CHMP4A-208ENST00000534106 IGFBP4P22692 258 aa4.44□□□□□ -1.7
CHMP4A-208ENST00000534106 PRELPP51888 382 aa4.44□□□□□ -1.7
CHMP4A-208ENST00000534106 GDF6Q6KF10 455 aaPredicted RBP4.44□□□□□ -1.7
CHMP4A-208ENST00000534106 TOM1L2Q6ZVM7 507 aa4.44□□□□□ -1.7
CHMP4A-208ENST00000534106 SMIM5Q71RC9 77 aa4.44□□□□□ -1.7
CHMP4A-208ENST00000534106 CMTR1Q8N1G2 835 aaKnown RBP4.44□□□□□ -1.7
CHMP4A-208ENST00000534106 GLMNQ92990 594 aa4.44□□□□□ -1.7
CHMP4A-208ENST00000534106 IFT43Q96FT9 208 aa4.44□□□□□ -1.7
CHMP4A-208ENST00000534106 MEGF10Q96KG7 1140 aa4.44□□□□□ -1.7
CHMP4A-208ENST00000534106 SSBP4Q9BWG4 385 aaPredicted RBP4.44□□□□□ -1.7
CHMP4A-208ENST00000534106 RBSNQ9H1K0 784 aa4.44□□□□□ -1.7
CHMP4A-208ENST00000534106 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.44□□□□□ -1.71e-6■■■■■ 145.3
CHMP4A-208ENST00000534106 ZFATQ9P243 1243 aa4.44□□□□□ -1.7
CHMP4A-208ENST00000534106 BCS1LQ9Y276 419 aa4.44□□□□□ -1.7
CHMP4A-208ENST00000534106 THRAP3Q9Y2W1 955 aaKnown RBP4.44□□□□□ -1.7
CHMP4A-208ENST00000534106 NRAPQ86VF7 1730 aa4.43□□□□□ -1.7
CHMP4A-208ENST00000534106 IQGAP3Q86VI3 1631 aa4.43□□□□□ -1.7
CHMP4A-208ENST00000534106 EXOC5O00471 708 aa4.43□□□□□ -1.7
CHMP4A-208ENST00000534106 GRIN3BO60391 1043 aa4.43□□□□□ -1.7
CHMP4A-208ENST00000534106 PTCD1O75127 700 aaKnown RBP4.43□□□□□ -1.7
CHMP4A-208ENST00000534106 MICAL2O94851 1124 aa4.43□□□□□ -1.7
CHMP4A-208ENST00000534106 MAP3K6O95382 1288 aa4.43□□□□□ -1.7
CHMP4A-208ENST00000534106 POLD1P28340 1107 aa4.43□□□□□ -1.7
CHMP4A-208ENST00000534106 INPP5BP32019 993 aa4.43□□□□□ -1.7
CHMP4A-208ENST00000534106 GPLD1P80108 840 aa4.43□□□□□ -1.7
CHMP4A-208ENST00000534106 PLAURQ03405 335 aa4.43□□□□□ -1.7
CHMP4A-208ENST00000534106 GRIK5Q16478 980 aa4.43□□□□□ -1.7
CHMP4A-208ENST00000534106 TMEM132AQ24JP5 1023 aa4.43□□□□□ -1.7
CHMP4A-208ENST00000534106 C11orf91Q3C1V1 193 aa4.43□□□□□ -1.7
CHMP4A-208ENST00000534106 PRR23CQ6ZRP0 262 aa4.43□□□□□ -1.7
CHMP4A-208ENST00000534106 KRTAP1-3Q8IUG1 177 aa4.43□□□□□ -1.7
CHMP4A-208ENST00000534106 TRPM4Q8TD43 1214 aa4.43□□□□□ -1.7
CHMP4A-208ENST00000534106 CDK19Q9BWU1 502 aa4.43□□□□□ -1.7
CHMP4A-208ENST00000534106 AKTIPQ9H8T0 292 aa4.43□□□□□ -1.7
CHMP4A-208ENST00000534106 VRTNQ9H8Y1 702 aa4.43□□□□□ -1.7
CHMP4A-208ENST00000534106 DMGDHQ9UI17 866 aaKnown RBP4.43□□□□□ -1.7
CHMP4A-208ENST00000534106 MAFBQ9Y5Q3 323 aaPredicted RBP4.43□□□□□ -1.7
CHMP4A-208ENST00000534106 ADGRB2O60241 1585 aa4.43□□□□□ -1.7
CHMP4A-208ENST00000534106 NWD2Q9ULI1 1742 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms