RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.41□□□□□ -1.06
RNPC3-209ENST00000533834 KIF13BQ9NQT8 1826 aa8.41□□□□□ -1.06
RNPC3-209ENST00000533834 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.4□□□□□ -1.06
RNPC3-209ENST00000533834 ANKRD7Q92527 254 aa8.4□□□□□ -1.06
RNPC3-209ENST00000533834 NUP62CLQ9H1M0 184 aa8.4□□□□□ -1.06
RNPC3-209ENST00000533834 INCENPQ9NQS7 918 aa8.4□□□□□ -1.06
RNPC3-209ENST00000533834 FAM53CQ9NYF3 392 aa8.4□□□□□ -1.06
RNPC3-209ENST00000533834 TM4SF1P30408 202 aa8.4□□□□□ -1.06
RNPC3-209ENST00000533834 NOLC1Q14978 699 aaKnown RBP eCLIP8.4□□□□□ -1.06
RNPC3-209ENST00000533834 ATP2B3Q16720 1220 aa8.4□□□□□ -1.06
RNPC3-209ENST00000533834 SHC4Q6S5L8 630 aa8.4□□□□□ -1.06
RNPC3-209ENST00000533834 FOXP4Q8IVH2 680 aaPredicted RBP8.4□□□□□ -1.06
RNPC3-209ENST00000533834 STAG1Q8WVM7 1258 aa8.4□□□□□ -1.06
RNPC3-209ENST00000533834 MKRN1Q9UHC7 482 aaKnown RBP8.4□□□□□ -1.06
RNPC3-209ENST00000533834 ZNF532Q9HCE3 1301 aa8.4□□□□□ -1.07
RNPC3-209ENST00000533834 IRS4O14654 1257 aaPredicted RBP8.4□□□□□ -1.07
RNPC3-209ENST00000533834 YEATS4O95619 227 aa8.4□□□□□ -1.07
RNPC3-209ENST00000533834 LIFRP42702 1097 aa8.4□□□□□ -1.07
RNPC3-209ENST00000533834 NDUFA8P51970 172 aa8.4□□□□□ -1.07
RNPC3-209ENST00000533834 CSPP1Q1MSJ5 1256 aa8.4□□□□□ -1.07
RNPC3-209ENST00000533834 HSP90AB3PQ58FF7 597 aa8.4□□□□□ -1.07
RNPC3-209ENST00000533834 APOA5Q6Q788 366 aa8.4□□□□□ -1.07
RNPC3-209ENST00000533834 MRFAP1L1Q96HT8 127 aa8.4□□□□□ -1.07
RNPC3-209ENST00000533834 MTA3Q9BTC8 594 aa8.4□□□□□ -1.07
RNPC3-209ENST00000533834 TMX1Q9H3N1 280 aa8.4□□□□□ -1.07
RNPC3-209ENST00000533834 PRC1O43663 620 aa8.39□□□□□ -1.07
RNPC3-209ENST00000533834 FAM160A1Q05DH4 1040 aa8.39□□□□□ -1.07
RNPC3-209ENST00000533834 SLC10A5Q5PT55 438 aa8.39□□□□□ -1.07
RNPC3-209ENST00000533834 AIFM3Q96NN9 605 aa8.39□□□□□ -1.07
RNPC3-209ENST00000533834 SNAP23O00161 211 aa8.39□□□□□ -1.07
RNPC3-209ENST00000533834 SARSP49591 514 aaKnown RBP8.39□□□□□ -1.07
RNPC3-209ENST00000533834 APTXQ7Z2E3 356 aaKnown RBP8.39□□□□□ -1.07
RNPC3-209ENST00000533834 TMEM139Q8IV31 216 aa8.39□□□□□ -1.07
RNPC3-209ENST00000533834 STK11IPQ8N1F8 1099 aa8.39□□□□□ -1.07
RNPC3-209ENST00000533834 LPIN2Q92539 896 aa8.39□□□□□ -1.07
RNPC3-209ENST00000533834 ROBO3Q96MS0 1386 aa8.39□□□□□ -1.07
RNPC3-209ENST00000533834 CCDC192P0DO97 292 aa8.39□□□□□ -1.07
RNPC3-209ENST00000533834 CRKLP46109 303 aaKnown RBP8.39□□□□□ -1.07
RNPC3-209ENST00000533834 PUM3Q15397 648 aaKnown RBP8.39□□□□□ -1.07
RNPC3-209ENST00000533834 CAMK4Q16566 473 aa8.39□□□□□ -1.07
RNPC3-209ENST00000533834 MYSM1Q5VVJ2 828 aa8.39□□□□□ -1.07
RNPC3-209ENST00000533834 ZSCAN25Q6NSZ9 544 aa8.39□□□□□ -1.07
RNPC3-209ENST00000533834 SEC31BQ9NQW1 1179 aa8.39□□□□□ -1.07
RNPC3-209ENST00000533834 INTS13Q9NVM9 706 aa8.39□□□□□ -1.07
RNPC3-209ENST00000533834 CEP126Q9P2H0 1117 aa8.39□□□□□ -1.07
RNPC3-209ENST00000533834 TNS1Q9HBL0 1735 aaKnown RBP8.39□□□□□ -1.07
RNPC3-209ENST00000533834 A0A087WWV3 80 aa8.38□□□□□ -1.07
RNPC3-209ENST00000533834 PITPNM1O00562 1244 aa8.38□□□□□ -1.07
RNPC3-209ENST00000533834 ADAMTS3O15072 1205 aa8.38□□□□□ -1.07
RNPC3-209ENST00000533834 RCAN1P53805 252 aa8.38□□□□□ -1.07
RNPC3-209ENST00000533834 CCT2P78371 535 aaKnown RBP8.38□□□□□ -1.07
RNPC3-209ENST00000533834 IFIT5Q13325 482 aaKnown RBP8.38□□□□□ -1.07
RNPC3-209ENST00000533834 PKN1Q16512 942 aa8.38□□□□□ -1.07
RNPC3-209ENST00000533834 CCDC57Q2TAC2 916 aa8.38□□□□□ -1.07
RNPC3-209ENST00000533834 SASS6Q6UVJ0 657 aa8.38□□□□□ -1.07
RNPC3-209ENST00000533834 LINC00116Q8NCU8 138 aa8.38□□□□□ -1.07
RNPC3-209ENST00000533834 CACTINQ8WUQ7 758 aaKnown RBP8.38□□□□□ -1.07
RNPC3-209ENST00000533834 C10orf71Q711Q0 1435 aa8.38□□□□□ -1.07
RNPC3-209ENST00000533834 GUCY1A2P33402 732 aa8.38□□□□□ -1.07
RNPC3-209ENST00000533834 SF3B3Q15393 1217 aaKnown RBP8.38□□□□□ -1.07
RNPC3-209ENST00000533834 RESP18Q5W5W9 173 aa8.38□□□□□ -1.07
RNPC3-209ENST00000533834 SLC51AQ86UW1 340 aa8.38□□□□□ -1.07
RNPC3-209ENST00000533834 OSBPL5Q9H0X9 879 aaPredicted RBP8.38□□□□□ -1.07
RNPC3-209ENST00000533834 ZSWIM5Q9P217 1185 aa8.38□□□□□ -1.07
RNPC3-209ENST00000533834 CNTNAP4Q9C0A0 1308 aa8.38□□□□□ -1.07
RNPC3-209ENST00000533834 MYH8P13535 1937 aa8.38□□□□□ -1.07
RNPC3-209ENST00000533834 WNT7AO00755 349 aa8.38□□□□□ -1.07
RNPC3-209ENST00000533834 RRP9O43818 475 aaKnown RBP8.38□□□□□ -1.07
RNPC3-209ENST00000533834 PPP6R2O75170 966 aa8.38□□□□□ -1.07
RNPC3-209ENST00000533834 STARD3NLO95772 234 aa8.38□□□□□ -1.07
RNPC3-209ENST00000533834 SLC39A14Q15043 492 aa8.38□□□□□ -1.07
RNPC3-209ENST00000533834 OTUD7BQ6GQQ9 843 aa8.38□□□□□ -1.07
RNPC3-209ENST00000533834 PTF1AQ7RTS3 328 aa8.38□□□□□ -1.07
RNPC3-209ENST00000533834 CKAP2LQ8IYA6 745 aa8.38□□□□□ -1.07
RNPC3-209ENST00000533834 SPATA5Q8NB90 893 aa8.38□□□□□ -1.07
RNPC3-209ENST00000533834 TRIM44Q96DX7 344 aaPredicted RBP8.38□□□□□ -1.07
RNPC3-209ENST00000533834 NEUROD6Q96NK8 337 aa8.38□□□□□ -1.07
RNPC3-209ENST00000533834 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.38□□□□□ -1.07
RNPC3-209ENST00000533834 M0R2N6 131 aa8.37□□□□□ -1.07
RNPC3-209ENST00000533834 LRMPQ12912 555 aa8.37□□□□□ -1.07
RNPC3-209ENST00000533834 TIGD1Q96MW7 591 aa8.37□□□□□ -1.07
RNPC3-209ENST00000533834 DNAJC25Q9H1X3 360 aa8.37□□□□□ -1.07
RNPC3-209ENST00000533834 STRN4Q9NRL3 753 aa8.37□□□□□ -1.07
RNPC3-209ENST00000533834 PATL2C9JE40 543 aaKnown RBP8.37□□□□□ -1.07
RNPC3-209ENST00000533834 FMNL1O95466 1100 aaPredicted RBP8.37□□□□□ -1.07
RNPC3-209ENST00000533834 ARID5BQ14865 1188 aa8.37□□□□□ -1.07
RNPC3-209ENST00000533834 DZIP3Q86Y13 1208 aaKnown RBP8.37□□□□□ -1.07
RNPC3-209ENST00000533834 CCAR1Q8IX12 1150 aaKnown RBP8.37□□□□□ -1.07
RNPC3-209ENST00000533834 IFNL3Q8IZI9 196 aa8.37□□□□□ -1.07
RNPC3-209ENST00000533834 LCORLQ8N3X6 602 aa8.37□□□□□ -1.07
RNPC3-209ENST00000533834 CFAP45Q9UL16 551 aa8.37□□□□□ -1.07
RNPC3-209ENST00000533834 ANGEL1Q9UNK9 670 aaKnown RBP8.37□□□□□ -1.07
RNPC3-209ENST00000533834 MYH7BA7E2Y1 1941 aa8.37□□□□□ -1.07
RNPC3-209ENST00000533834 DYNC1I1O14576 645 aa8.36□□□□□ -1.07
RNPC3-209ENST00000533834 CAVIN2O95810 425 aa8.36□□□□□ -1.07
RNPC3-209ENST00000533834 PTGS1P23219 599 aa8.36□□□□□ -1.07
RNPC3-209ENST00000533834 KIAA2012Q0VF49 1180 aa8.36□□□□□ -1.07
RNPC3-209ENST00000533834 TTC39AQ5SRH9 613 aa8.36□□□□□ -1.07
RNPC3-209ENST00000533834 KIF6Q6ZMV9 814 aa8.36□□□□□ -1.07
RNPC3-209ENST00000533834 BRAPQ7Z569 592 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms