RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 CCDC74AQ96AQ1 378 aa6.3□□□□□ -1.4
ECHDC1-222ENST00000531967 TARS2Q9BW92 718 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-222ENST00000531967 WASHC2AQ641Q2 1341 aa6.3□□□□□ -1.4
ECHDC1-222ENST00000531967 RFPL3O75679 317 aa6.3□□□□□ -1.4
ECHDC1-222ENST00000531967 IGHDP01880 384 aa6.3□□□□□ -1.4
ECHDC1-222ENST00000531967 EIF6P56537 245 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-222ENST00000531967 MZT2BQ6NZ67 158 aa6.3□□□□□ -1.4
ECHDC1-222ENST00000531967 ZBTB33Q86T24 672 aa6.3□□□□□ -1.4
ECHDC1-222ENST00000531967 ARMC2Q8NEN0 867 aa6.3□□□□□ -1.4
ECHDC1-222ENST00000531967 ATRIPQ8WXE1 791 aa6.3□□□□□ -1.4
ECHDC1-222ENST00000531967 TRIM56Q9BRZ2 755 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-222ENST00000531967 CXorf56Q9H5V9 222 aa6.3□□□□□ -1.4
ECHDC1-222ENST00000531967 PHTF1Q9UMS5 762 aa6.3□□□□□ -1.4
ECHDC1-222ENST00000531967 SUPT16HQ9Y5B9 1047 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-222ENST00000531967 PABPN1LA6NDY0 278 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 C9IYK1 514 aa6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 MICAL2O94851 1124 aa6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 NCAM1P13591 858 aa6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 SLC5A1P13866 664 aa6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 MMP14P50281 582 aa6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 GTF2A2P52657 109 aa6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 GRIN2CQ14957 1233 aa6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 GJC2Q5T442 439 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 SWT1Q5T5J6 900 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 NBPF14Q5TI25 921 aa6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 PRPF40BQ6NWY9 871 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 NXPE4Q6UWF7 544 aa6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 RSRC2Q7L4I2 434 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 EEPD1Q7L9B9 569 aa6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 LMNTD2Q8IXW0 634 aa6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 NKAPQ8N5F7 415 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 CCDC47Q96A33 483 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 NELL2Q99435 816 aa6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 CENPOQ9BU64 300 aa6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 TRIM8Q9BZR9 551 aa6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 TNKS2Q9H2K2 1166 aa6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 SH3GLB2Q9NR46 395 aa6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 PCDHB11Q9Y5F2 797 aa6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 GABRDO14764 452 aa6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 PPP1R12BO60237 982 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 GREM1O60565 184 aa6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 HMMRO75330 724 aa6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 FAM153BP0C7A2 387 aa6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 GIPRP48546 466 aa6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 ELF2Q15723 593 aa6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 PTPRNQ16849 979 aa6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 EIF2AK1Q9BQI3 630 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 IP6K2Q9UHH9 426 aa6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 ODF2LQ9ULJ1 636 aa6.29□□□□□ -1.4
ECHDC1-222ENST00000531967 RXRGP48443 463 aa6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 EPHA4P54764 986 aa6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 RNF219Q5W0B1 726 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 SH3RF1Q7Z6J0 888 aa6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 PNMA8AQ86V59 439 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 ETFBKMTQ8IXQ9 262 aa6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 ST13P5Q8NFI4 369 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 PARD3BQ8TEW8 1205 aa6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 RPGRQ92834 1020 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 MYO19Q96H55 970 aa6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 FMNL2Q96PY5 1086 aa6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 CD248Q9HCU0 757 aa6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 NLRC4Q9NPP4 1024 aa6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 LUC7LQ9NQ29 371 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 TRHDEQ9UKU6 1024 aa6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 DMTF1Q9Y222 760 aa6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 PCDHGB3Q9Y5G1 929 aa6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 POTECB2RU33 542 aa6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 CFHP08603 1231 aa6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 U2AF1L5P0DN76 240 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 ZAP70P43403 619 aa6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 CRKP46108 304 aa6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 CCT5P48643 541 aa6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 TDO2P48775 406 aa6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 U2AF1Q01081 240 aaKnown RBP eCLIP6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 STRN3Q13033 797 aa6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 TBX2Q13207 712 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 XRRA1Q6P2D8 792 aa6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 C1orf122Q6ZSJ8 110 aa6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 TRIM22Q8IYM9 498 aa6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 RHOVQ96L33 236 aa6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 KLHL11Q9NVR0 708 aa6.28□□□□□ -1.4
ECHDC1-222ENST00000531967 TNKSO95271 1327 aa6.27□□□□□ -1.4
ECHDC1-222ENST00000531967 DNAJC25-GNG10A0A024R161 153 aa6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 ABHD14A-ACY1A0A1B0GW23 586 aa6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 A6NHS1 94 aa6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 GPR39O43194 453 aa6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 GJA9P57773 515 aa6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 GBX1Q14549 363 aa6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 GRM3Q14832 879 aa6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 MINDY4Q4G0A6 757 aa6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 RC3H1Q5TC82 1133 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 IL17REQ8NFR9 667 aa6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 NKD1Q969G9 470 aa6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 GGNBP2Q9H3C7 697 aa6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 ZSWIM6Q9HCJ5 1215 aa6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 VAMP4O75379 141 aa6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 GARTP22102 1010 aa6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 OAS2P29728 719 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 FLT3P36888 993 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms