RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	CCAR2	Q8N163	923 aa	Known RBP	27.1	■■□□□ 1.93
GSDMD-208	ENST00000528475	CCDC150	Q8NCX0	1101 aa		27.1	■■□□□ 1.93
GSDMD-208	ENST00000528475	HPSE	Q9Y251	543 aa		27.1	■■□□□ 1.93
GSDMD-208	ENST00000528475	IKBKB	O14920	756 aa		27.1	■■□□□ 1.93
GSDMD-208	ENST00000528475	WDHD1	O75717	1129 aa	Predicted RBP	27.1	■■□□□ 1.93
GSDMD-208	ENST00000528475	JMY	Q8N9B5	988 aa		27.1	■■□□□ 1.93
GSDMD-208	ENST00000528475	ARAP2	Q8WZ64	1704 aa		27.1	■■□□□ 1.93
GSDMD-208	ENST00000528475	ZNF532	Q9HCE3	1301 aa		27.09	■■□□□ 1.93
GSDMD-208	ENST00000528475	TCRBV5S4A2T	A0A5A2	114 aa		27.09	■■□□□ 1.93
GSDMD-208	ENST00000528475	KIF2A	O00139	706 aa	Predicted RBP	27.09	■■□□□ 1.93
GSDMD-208	ENST00000528475	KCNJ6	P48051	423 aa		27.09	■■□□□ 1.93
GSDMD-208	ENST00000528475	NCAPH	Q15003	741 aa		27.09	■■□□□ 1.93
GSDMD-208	ENST00000528475	SGMS1	Q86VZ5	419 aa		27.09	■■□□□ 1.93
GSDMD-208	ENST00000528475	VPS37D	Q86XT2	251 aa		27.09	■■□□□ 1.93
GSDMD-208	ENST00000528475	TUBE1	Q9UJT0	475 aa		27.09	■■□□□ 1.93
GSDMD-208	ENST00000528475	TBC1D2B	Q9UPU7	963 aa		27.09	■■□□□ 1.93
GSDMD-208	ENST00000528475	NHSL1	Q5SYE7	1610 aa		27.09	■■□□□ 1.93
GSDMD-208	ENST00000528475	MROH7-TTC4	A0A0A0MT08	1334 aa		27.09	■■□□□ 1.93
GSDMD-208	ENST00000528475	IRS4	O14654	1257 aa	Predicted RBP	27.09	■■□□□ 1.93
GSDMD-208	ENST00000528475	PDE6A	P16499	860 aa		27.09	■■□□□ 1.93
GSDMD-208	ENST00000528475	KRT40	Q6A162	431 aa		27.09	■■□□□ 1.93
GSDMD-208	ENST00000528475	PDE8A	O60658	829 aa		27.08	■■□□□ 1.93
GSDMD-208	ENST00000528475	PTPA	Q15257	358 aa		27.08	■■□□□ 1.93
GSDMD-208	ENST00000528475	CCDC102B	Q68D86	513 aa		27.08	■■□□□ 1.93
GSDMD-208	ENST00000528475	IGDCC4	Q8TDY8	1250 aa		27.08	■■□□□ 1.93
GSDMD-208	ENST00000528475	FBXW7	Q969H0	707 aa		27.08	■■□□□ 1.93
GSDMD-208	ENST00000528475	XPO4	Q9C0E2	1151 aa	Known RBP	27.08	■■□□□ 1.93
GSDMD-208	ENST00000528475	DENND2A	Q9ULE3	1009 aa		27.08	■■□□□ 1.93
GSDMD-208	ENST00000528475	ITGB4	P16144	1822 aa		27.08	■■□□□ 1.93
GSDMD-208	ENST00000528475	GPT	P24298	496 aa		27.07	■■□□□ 1.92
GSDMD-208	ENST00000528475	NTRK3	Q16288	839 aa		27.07	■■□□□ 1.92
GSDMD-208	ENST00000528475	ECM29	Q5VYK3	1845 aa		27.07	■■□□□ 1.92
GSDMD-208	ENST00000528475	IDH1	O75874	414 aa	Known RBP	27.07	■■□□□ 1.92
GSDMD-208	ENST00000528475	U2AF2	P26368	475 aa	Known RBP eCLIP	27.07	■■□□□ 1.92
GSDMD-208	ENST00000528475	CDC27	P30260	824 aa		27.07	■■□□□ 1.92
GSDMD-208	ENST00000528475	NKX2-3	Q8TAU0	364 aa		27.07	■■□□□ 1.92
GSDMD-208	ENST00000528475	STRBP	Q96SI9	672 aa	Known RBP	27.07	■■□□□ 1.92
GSDMD-208	ENST00000528475	STK36	Q9NRP7	1315 aa		27.06	■■□□□ 1.92
GSDMD-208	ENST00000528475	SYK	P43405	635 aa		27.06	■■□□□ 1.92
GSDMD-208	ENST00000528475	FEZ1	Q99689	392 aa		27.06	■■□□□ 1.92
GSDMD-208	ENST00000528475	IFNK	Q9P0W0	207 aa		27.06	■■□□□ 1.92
GSDMD-208	ENST00000528475	MYO5A	Q9Y4I1	1855 aa	Known RBP	27.06	■■□□□ 1.92
GSDMD-208	ENST00000528475	ZBTB43	O43298	467 aa		27.05	■■□□□ 1.92
GSDMD-208	ENST00000528475	CYP19A1	P11511	503 aa	Predicted RBP	27.05	■■□□□ 1.92
GSDMD-208	ENST00000528475	FGFR2	P21802	821 aa		27.05	■■□□□ 1.92
GSDMD-208	ENST00000528475	LIFR	P42702	1097 aa		27.05	■■□□□ 1.92
GSDMD-208	ENST00000528475	PHKA1	P46020	1223 aa		27.05	■■□□□ 1.92
GSDMD-208	ENST00000528475	AIFM3	Q96NN9	605 aa		27.05	■■□□□ 1.92
GSDMD-208	ENST00000528475	MAP3K14	Q99558	947 aa		27.05	■■□□□ 1.92
GSDMD-208	ENST00000528475	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	27.05	■■□□□ 1.92
GSDMD-208	ENST00000528475		B4E1Z4	1266 aa		27.05	■■□□□ 1.92
GSDMD-208	ENST00000528475	APP	P05067	770 aa		27.05	■■□□□ 1.92
GSDMD-208	ENST00000528475	LPIN2	Q92539	896 aa		27.05	■■□□□ 1.92
GSDMD-208	ENST00000528475	LY9	Q9HBG7	655 aa		27.05	■■□□□ 1.92
GSDMD-208	ENST00000528475	CGN	Q9P2M7	1197 aa	Known RBP	27.05	■■□□□ 1.92
GSDMD-208	ENST00000528475	NID2	Q14112	1375 aa		27.05	■■□□□ 1.92
GSDMD-208	ENST00000528475	SMC2	O95347	1197 aa		27.04	■■□□□ 1.92
GSDMD-208	ENST00000528475	MARCKS	P29966	332 aa	Predicted RBP	27.04	■■□□□ 1.92
GSDMD-208	ENST00000528475	PUM3	Q15397	648 aa	Known RBP	27.04	■■□□□ 1.92
GSDMD-208	ENST00000528475	WWC3	Q9ULE0	1092 aa		27.04	■■□□□ 1.92
GSDMD-208	ENST00000528475	TIAM2	Q8IVF5	1701 aa		27.04	■■□□□ 1.92
GSDMD-208	ENST00000528475	MROH5	Q6ZUA9	1318 aa		27.04	■■□□□ 1.92
GSDMD-208	ENST00000528475	ERVV-1	B6SEH8	477 aa		27.04	■■□□□ 1.92
GSDMD-208	ENST00000528475	IARS	P41252	1262 aa	Known RBP	27.04	■■□□□ 1.92
GSDMD-208	ENST00000528475	RESP18	Q5W5W9	173 aa		27.04	■■□□□ 1.92
GSDMD-208	ENST00000528475	SHC4	Q6S5L8	630 aa		27.04	■■□□□ 1.92
GSDMD-208	ENST00000528475	FAM217B	Q9NTX9	383 aa	Predicted RBP	27.04	■■□□□ 1.92
GSDMD-208	ENST00000528475	TRMT112	Q9UI30	125 aa	Known RBP	27.04	■■□□□ 1.92
GSDMD-208	ENST00000528475	DOCK2	Q92608	1830 aa		27.03	■■□□□ 1.92
GSDMD-208	ENST00000528475	PSD	A5PKW4	1024 aa	Predicted RBP	27.03	■■□□□ 1.92
GSDMD-208	ENST00000528475	PATL2	C9JE40	543 aa	Known RBP	27.03	■■□□□ 1.92
GSDMD-208	ENST00000528475	BIN1	O00499	593 aa		27.03	■■□□□ 1.92
GSDMD-208	ENST00000528475	ZNF592	Q92610	1267 aa		27.03	■■□□□ 1.92
GSDMD-208	ENST00000528475	AIDA	Q96BJ3	306 aa		27.03	■■□□□ 1.92
GSDMD-208	ENST00000528475	NUP98	P52948	1817 aa		27.03	■■□□□ 1.92
GSDMD-208	ENST00000528475	CUTA	O60888	179 aa		27.02	■■□□□ 1.92
GSDMD-208	ENST00000528475	ARMCX5	Q6P1M9	558 aa		27.02	■■□□□ 1.92
GSDMD-208	ENST00000528475	TMC6	Q7Z403	805 aa		27.02	■■□□□ 1.92
GSDMD-208	ENST00000528475	AK7	Q96M32	723 aa		27.02	■■□□□ 1.92
GSDMD-208	ENST00000528475	SENP2	Q9HC62	589 aa		27.02	■■□□□ 1.92
GSDMD-208	ENST00000528475	BCL9	O00512	1426 aa		27.02	■■□□□ 1.92
GSDMD-208	ENST00000528475	GOLGA8A	A7E2F4	631 aa		27.02	■■□□□ 1.92
GSDMD-208	ENST00000528475	MYO1B	O43795	1136 aa		27.02	■■□□□ 1.92
GSDMD-208	ENST00000528475	TRIM29	Q14134	588 aa		27.02	■■□□□ 1.92
GSDMD-208	ENST00000528475	MICU3	Q86XE3	530 aa		27.02	■■□□□ 1.92
GSDMD-208	ENST00000528475	ELOA2	Q8IYF1	753 aa	Predicted RBP	27.02	■■□□□ 1.92
GSDMD-208	ENST00000528475	KIF18A	Q8NI77	898 aa		27.02	■■□□□ 1.92
GSDMD-208	ENST00000528475	PHKB	Q93100	1093 aa		27.02	■■□□□ 1.92
GSDMD-208	ENST00000528475	RANBP6	O60518	1105 aa	Known RBP	27.01	■■□□□ 1.91
GSDMD-208	ENST00000528475	CBX1	P83916	185 aa		27.01	■■□□□ 1.91
GSDMD-208	ENST00000528475	TMEM67	Q5HYA8	995 aa		27.01	■■□□□ 1.91
GSDMD-208	ENST00000528475	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	27.01	■■□□□ 1.91
GSDMD-208	ENST00000528475	TUBB4A	P04350	444 aa		27.01	■■□□□ 1.91
GSDMD-208	ENST00000528475	SFPQ	P23246	707 aa	Known RBP eCLIP	27.01	■■□□□ 1.91
GSDMD-208	ENST00000528475	FANCC	Q00597	558 aa		27.01	■■□□□ 1.91
GSDMD-208	ENST00000528475	GNL2	Q13823	731 aa	Known RBP	27.01	■■□□□ 1.91
GSDMD-208	ENST00000528475	SLC4A9	Q96Q91	983 aa		27.01	■■□□□ 1.91
GSDMD-208	ENST00000528475	HSD3B7	Q9H2F3	369 aa		27.01	■■□□□ 1.91
GSDMD-208	ENST00000528475	CNNM2	Q9H8M5	875 aa		27.01	■■□□□ 1.91
GSDMD-208	ENST00000528475	TRMT1	Q9NXH9	659 aa	Known RBP	27.01	■■□□□ 1.91

Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms