RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 RHBDL3P58872 404 aa20.19■□□□□ 0.82
SMCO4-204ENST00000527149 CDC42EP5Q6NZY7 148 aa20.19■□□□□ 0.82
SMCO4-204ENST00000527149 SLF2Q8IX21 1173 aa20.19■□□□□ 0.82
SMCO4-204ENST00000527149 GLIS2Q9BZE0 524 aaPredicted RBP20.19■□□□□ 0.82
SMCO4-204ENST00000527149 CYP7A1P22680 504 aa20.18■□□□□ 0.82
SMCO4-204ENST00000527149 ADD2P35612 726 aa20.18■□□□□ 0.82
SMCO4-204ENST00000527149 BTDP43251 543 aa20.18■□□□□ 0.82
SMCO4-204ENST00000527149 FSTL1Q12841 308 aa20.18■□□□□ 0.82
SMCO4-204ENST00000527149 SLFNL1Q499Z3 407 aa20.18■□□□□ 0.82
SMCO4-204ENST00000527149 SLC9C2Q5TAH2 1124 aa20.18■□□□□ 0.82
SMCO4-204ENST00000527149 CNTROBQ8N137 903 aa20.18■□□□□ 0.82
SMCO4-204ENST00000527149 PASKQ96RG2 1323 aa20.18■□□□□ 0.82
SMCO4-204ENST00000527149 TRPM7Q96QT4 1865 aa20.18■□□□□ 0.82
SMCO4-204ENST00000527149 ADM5C9JUS6 153 aa20.17■□□□□ 0.82
SMCO4-204ENST00000527149 LDHCP07864 332 aa20.17■□□□□ 0.82
SMCO4-204ENST00000527149 GSPT1P15170 499 aaKnown RBP20.17■□□□□ 0.82
SMCO4-204ENST00000527149 PPP4CP60510 307 aa20.17■□□□□ 0.82
SMCO4-204ENST00000527149 DLK2Q6UY11 383 aa20.17■□□□□ 0.82
SMCO4-204ENST00000527149 KRT26Q7Z3Y9 468 aa20.17■□□□□ 0.82
SMCO4-204ENST00000527149 APOBEC3FQ8IUX4 373 aaKnown RBP20.17■□□□□ 0.82
SMCO4-204ENST00000527149 SCAF8Q9UPN6 1271 aaKnown RBP20.17■□□□□ 0.82
SMCO4-204ENST00000527149 ZNF532Q9HCE3 1301 aa20.17■□□□□ 0.82
SMCO4-204ENST00000527149 CNTNAP1P78357 1384 aa20.17■□□□□ 0.82
SMCO4-204ENST00000527149 TRAF5O00463 557 aa20.16■□□□□ 0.82
SMCO4-204ENST00000527149 MYO1BO43795 1136 aa20.16■□□□□ 0.82
SMCO4-204ENST00000527149 CACNB3P54284 484 aa20.16■□□□□ 0.82
SMCO4-204ENST00000527149 TTC22Q5TAA0 569 aa20.16■□□□□ 0.82
SMCO4-204ENST00000527149 DCPSQ96C86 337 aaKnown RBP20.16■□□□□ 0.82
SMCO4-204ENST00000527149 DDX60LQ5H9U9 1706 aaKnown RBP20.16■□□□□ 0.82
SMCO4-204ENST00000527149 WDHD1O75717 1129 aaPredicted RBP20.15■□□□□ 0.82
SMCO4-204ENST00000527149 FMR1Q06787 632 aaKnown RBP eCLIP20.15■□□□□ 0.82
SMCO4-204ENST00000527149 NFIAQ12857 509 aa20.15■□□□□ 0.82
SMCO4-204ENST00000527149 UBE3CQ15386 1083 aa20.15■□□□□ 0.82
SMCO4-204ENST00000527149 FKBP1CQ5VVH2 108 aa20.15■□□□□ 0.82
SMCO4-204ENST00000527149 CDC37L1Q7L3B6 337 aa20.15■□□□□ 0.82
SMCO4-204ENST00000527149 EVI5LQ96CN4 794 aa20.15■□□□□ 0.82
SMCO4-204ENST00000527149 RIOK1Q9BRS2 568 aaKnown RBP20.15■□□□□ 0.82
SMCO4-204ENST00000527149 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.15■□□□□ 0.82
SMCO4-204ENST00000527149 VEZTQ9HBM0 779 aa20.15■□□□□ 0.82
SMCO4-204ENST00000527149 AATFQ9NY61 560 aaKnown RBP eCLIP20.15■□□□□ 0.82
SMCO4-204ENST00000527149 SSC5DA1L4H1 1573 aa20.15■□□□□ 0.82
SMCO4-204ENST00000527149 RPAP1Q9BWH6 1393 aaPredicted RBP20.14■□□□□ 0.81
SMCO4-204ENST00000527149 USP48Q86UV5 1035 aa20.14■□□□□ 0.81
SMCO4-204ENST00000527149 SULF1Q8IWU6 871 aa20.14■□□□□ 0.81
SMCO4-204ENST00000527149 MIGA1Q8NAN2 632 aa20.14■□□□□ 0.81
SMCO4-204ENST00000527149 USP40Q9NVE5 1235 aa20.14■□□□□ 0.81
SMCO4-204ENST00000527149 FAM198AQ9UFP1 575 aa20.14■□□□□ 0.81
SMCO4-204ENST00000527149 DYNLL1P63167 89 aaKnown RBP20.13■□□□□ 0.81
SMCO4-204ENST00000527149 CDAN1Q8IWY9 1227 aa20.13■□□□□ 0.81
SMCO4-204ENST00000527149 SH3RF3Q8TEJ3 882 aaPredicted RBP20.13■□□□□ 0.81
SMCO4-204ENST00000527149 FSD1Q9BTV5 496 aa20.13■□□□□ 0.81
SMCO4-204ENST00000527149 IDI2Q9BXS1 227 aa20.13■□□□□ 0.81
SMCO4-204ENST00000527149 DEFB129Q9H1M3 183 aa20.13■□□□□ 0.81
SMCO4-204ENST00000527149 DDX4Q9NQI0 724 aaKnown RBP20.13■□□□□ 0.81
SMCO4-204ENST00000527149 TCP10L2B9ZVM9 353 aa20.12■□□□□ 0.81
SMCO4-204ENST00000527149 RNF113AO15541 343 aaKnown RBP20.12■□□□□ 0.81
SMCO4-204ENST00000527149 RASA3Q14644 834 aa20.12■□□□□ 0.81
SMCO4-204ENST00000527149 TEPSINQ96N21 525 aa20.12■□□□□ 0.81
SMCO4-204ENST00000527149 CEP350Q5VT06 3117 aa20.11■□□□□ 0.81
SMCO4-204ENST00000527149 ZFYP08048 801 aaPredicted RBP20.11■□□□□ 0.81
SMCO4-204ENST00000527149 TNFAIP1Q13829 316 aa20.11■□□□□ 0.81
SMCO4-204ENST00000527149 ZSCAN25Q6NSZ9 544 aa20.11■□□□□ 0.81
SMCO4-204ENST00000527149 FAM83AQ86UY5 434 aa20.11■□□□□ 0.81
SMCO4-204ENST00000527149 CDCA5Q96FF9 252 aa20.11■□□□□ 0.81
SMCO4-204ENST00000527149 TMOD2Q9NZR1 351 aa20.11■□□□□ 0.81
SMCO4-204ENST00000527149 PPP2R3BQ9Y5P8 575 aa20.11■□□□□ 0.81
SMCO4-204ENST00000527149 NAV1Q8NEY1 1877 aa20.11■□□□□ 0.81
SMCO4-204ENST00000527149 SIPA1L1O43166 1804 aa20.11■□□□□ 0.81
SMCO4-204ENST00000527149 COL2A1P02458 1487 aaPredicted RBP20.11■□□□□ 0.81
SMCO4-204ENST00000527149 PAPPA2Q9BXP8 1791 aa20.11■□□□□ 0.81
SMCO4-204ENST00000527149 NPM3O75607 178 aaKnown RBP20.1■□□□□ 0.81
SMCO4-204ENST00000527149 BAG3O95817 575 aa20.1■□□□□ 0.81
SMCO4-204ENST00000527149 PLCG2P16885 1265 aa20.1■□□□□ 0.81
SMCO4-204ENST00000527149 RGS3P49796 1198 aa20.1■□□□□ 0.81
SMCO4-204ENST00000527149 C1QTNF8P60827 252 aa20.1■□□□□ 0.81
SMCO4-204ENST00000527149 ZMYM1Q5SVZ6 1142 aa20.1■□□□□ 0.81
SMCO4-204ENST00000527149 TICAM2Q86XR7 235 aa20.1■□□□□ 0.81
SMCO4-204ENST00000527149 TEX11Q8IYF3 940 aa20.1■□□□□ 0.81
SMCO4-204ENST00000527149 LCORLQ8N3X6 602 aa20.1■□□□□ 0.81
SMCO4-204ENST00000527149 APPBP2Q92624 585 aa20.1■□□□□ 0.81
SMCO4-204ENST00000527149 OSBP2Q969R2 916 aa20.1■□□□□ 0.81
SMCO4-204ENST00000527149 PUS7LQ9H0K6 701 aaKnown RBP20.1■□□□□ 0.81
SMCO4-204ENST00000527149 TRIM6-TRIM34B2RNG4 842 aa20.09■□□□□ 0.81
SMCO4-204ENST00000527149 MBD4O95243 580 aa20.09■□□□□ 0.81
SMCO4-204ENST00000527149 SDSP20132 328 aa20.09■□□□□ 0.81
SMCO4-204ENST00000527149 PRAMEF18Q5VWM3 479 aa20.09■□□□□ 0.81
SMCO4-204ENST00000527149 CERS3Q8IU89 383 aa20.09■□□□□ 0.81
SMCO4-204ENST00000527149 ZFPM1Q8IX07 1006 aa20.09■□□□□ 0.81
SMCO4-204ENST00000527149 NOL10Q9BSC4 688 aaKnown RBP20.09■□□□□ 0.81
SMCO4-204ENST00000527149 TMEM39BQ9GZU3 492 aa20.09■□□□□ 0.81
SMCO4-204ENST00000527149 ATRNL1Q5VV63 1379 aa20.08■□□□□ 0.81
SMCO4-204ENST00000527149 MAGEB6P1A0A0J9YX57 407 aa20.08■□□□□ 0.81
SMCO4-204ENST00000527149 ENTPD3O75355 529 aa20.08■□□□□ 0.81
SMCO4-204ENST00000527149 SH3BP5LQ7L8J4 393 aa20.08■□□□□ 0.81
SMCO4-204ENST00000527149 FAM151AQ8WW52 585 aa20.08■□□□□ 0.81
SMCO4-204ENST00000527149 FLT1P17948 1338 aa20.07■□□□□ 0.8
SMCO4-204ENST00000527149 M0R2C6 588 aa20.07■□□□□ 0.8
SMCO4-204ENST00000527149 TNNI2P48788 182 aa20.07■□□□□ 0.8
SMCO4-204ENST00000527149 TCP10Q12799 353 aa20.07■□□□□ 0.8
SMCO4-204ENST00000527149 LRRFIP1Q32MZ4 808 aaKnown RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms