RNA–Protein interactions for RNA: ENST00000526457.3

LRRK1-205, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 11,632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-205ENST00000526457 FBXO41Q8TF61 875 aa8.61□□□□□ -1.03
LRRK1-205ENST00000526457 TMX3Q96JJ7 454 aa8.61□□□□□ -1.03
LRRK1-205ENST00000526457 MPHOSPH8Q99549 860 aa8.61□□□□□ -1.03
LRRK1-205ENST00000526457 HAUS8Q9BT25 410 aa8.61□□□□□ -1.03
LRRK1-205ENST00000526457 ANLNQ9NQW6 1124 aa8.61□□□□□ -1.03
LRRK1-205ENST00000526457 HDAC9Q9UKV0 1011 aa8.61□□□□□ -1.03
LRRK1-205ENST00000526457 PBRM1Q86U86 1689 aa8.6□□□□□ -1.03
LRRK1-205ENST00000526457 DNM1Q05193 864 aaKnown RBP8.6□□□□□ -1.03
LRRK1-205ENST00000526457 ITIH3Q06033 890 aa8.6□□□□□ -1.03
LRRK1-205ENST00000526457 CATIPQ7Z7H3 387 aa8.6□□□□□ -1.03
LRRK1-205ENST00000526457 CFAP61Q8NHU2 1237 aa8.6□□□□□ -1.03
LRRK1-205ENST00000526457 MRRFQ96E11 262 aaKnown RBP8.6□□□□□ -1.03
LRRK1-205ENST00000526457 RBSNQ9H1K0 784 aa8.6□□□□□ -1.03
LRRK1-205ENST00000526457 PTPRCP08575 1304 aa8.6□□□□□ -1.03
LRRK1-205ENST00000526457 TBCAO75347 108 aaKnown RBP8.6□□□□□ -1.03
LRRK1-205ENST00000526457 CEP70Q8NHQ1 597 aa8.6□□□□□ -1.03
LRRK1-205ENST00000526457 LRP2BPQ9P2M1 347 aa8.6□□□□□ -1.03
LRRK1-205ENST00000526457 IFT88Q13099 833 aa8.6□□□□□ -1.03
LRRK1-205ENST00000526457 TAF11Q15544 211 aa8.6□□□□□ -1.03
LRRK1-205ENST00000526457 RGS16O15492 202 aaPredicted RBP8.6□□□□□ -1.03
LRRK1-205ENST00000526457 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.6□□□□□ -1.03
LRRK1-205ENST00000526457 PPP1R12AO14974 1030 aaPredicted RBP8.6□□□□□ -1.03
LRRK1-205ENST00000526457 NUCB1Q02818 461 aa8.6□□□□□ -1.03
LRRK1-205ENST00000526457 C20orf194Q5TEA3 1177 aa8.6□□□□□ -1.03
LRRK1-205ENST00000526457 C16orf87Q6PH81 154 aa8.6□□□□□ -1.03
LRRK1-205ENST00000526457 MMS22LQ6ZRQ5 1243 aa8.6□□□□□ -1.03
LRRK1-205ENST00000526457 HELBQ8NG08 1087 aaPredicted RBP8.6□□□□□ -1.03
LRRK1-205ENST00000526457 BCAS4Q8TDM0 211 aa8.6□□□□□ -1.03
LRRK1-205ENST00000526457 NAPBQ9H115 298 aa8.6□□□□□ -1.03
LRRK1-205ENST00000526457 CSRNP2Q9H175 543 aa8.6□□□□□ -1.03
LRRK1-205ENST00000526457 GOLGA8KD6RF30 607 aa8.6□□□□□ -1.03
LRRK1-205ENST00000526457 SLFN5Q08AF3 891 aa8.6□□□□□ -1.03
LRRK1-205ENST00000526457 ATG3Q9NT62 314 aa8.6□□□□□ -1.03
LRRK1-205ENST00000526457 IL16Q14005 1332 aa8.6□□□□□ -1.03
LRRK1-205ENST00000526457 TROVE2P10155 538 aaKnown RBP eCLIP8.6□□□□□ -1.03
LRRK1-205ENST00000526457 DYNC1I2Q13409 638 aaKnown RBP8.59□□□□□ -1.03
LRRK1-205ENST00000526457 USP37Q86T82 979 aa8.59□□□□□ -1.03
LRRK1-205ENST00000526457 A0A087WUV0 522 aaPredicted RBP8.59□□□□□ -1.03
LRRK1-205ENST00000526457 KRT10P13645 584 aa8.59□□□□□ -1.03
LRRK1-205ENST00000526457 RAPGEF4Q8WZA2 1011 aa8.59□□□□□ -1.03
LRRK1-205ENST00000526457 PAIP2BQ9ULR5 123 aaKnown RBP8.59□□□□□ -1.03
LRRK1-205ENST00000526457 ANKRD12Q6UB98 2062 aa8.59□□□□□ -1.03
LRRK1-205ENST00000526457 CEP126Q9P2H0 1117 aa8.59□□□□□ -1.03
LRRK1-205ENST00000526457 TTF2Q9UNY4 1162 aaKnown RBP8.59□□□□□ -1.03
LRRK1-205ENST00000526457 ASIC1P78348 528 aa8.59□□□□□ -1.03
LRRK1-205ENST00000526457 RILPL1Q5EBL4 403 aa8.59□□□□□ -1.03
LRRK1-205ENST00000526457 UIMC1Q96RL1 719 aa8.59□□□□□ -1.03
LRRK1-205ENST00000526457 CCDC68Q9H2F9 335 aa8.59□□□□□ -1.03
LRRK1-205ENST00000526457 hCG_2014768A0A024R1R8 64 aa8.59□□□□□ -1.03
LRRK1-205ENST00000526457 TTC19Q6DKK2 380 aaPredicted RBP8.59□□□□□ -1.03
LRRK1-205ENST00000526457 GGNBP2Q9H3C7 697 aa8.59□□□□□ -1.03
LRRK1-205ENST00000526457 SPG7Q9UQ90 795 aa8.59□□□□□ -1.03
LRRK1-205ENST00000526457 HNRNPCP07910 306 aaKnown RBP eCLIP8.59□□□□□ -1.03
LRRK1-205ENST00000526457 STX2P32856 288 aa8.59□□□□□ -1.03
LRRK1-205ENST00000526457 ZNF75DP51815 510 aa8.59□□□□□ -1.03
LRRK1-205ENST00000526457 TRIM60Q495X7 471 aa8.59□□□□□ -1.03
LRRK1-205ENST00000526457 CCDC93Q567U6 631 aa8.59□□□□□ -1.03
LRRK1-205ENST00000526457 IQCA1Q86XH1 822 aa8.59□□□□□ -1.03
LRRK1-205ENST00000526457 TEX2Q8IWB9 1127 aa8.59□□□□□ -1.03
LRRK1-205ENST00000526457 TCP11Q8WWU5 503 aa8.59□□□□□ -1.03
LRRK1-205ENST00000526457 TRIM31Q9BZY9 425 aa8.59□□□□□ -1.03
LRRK1-205ENST00000526457 MYH9P35579 1960 aaKnown RBP8.59□□□□□ -1.03
LRRK1-205ENST00000526457 DNMT1P26358 1616 aaKnown RBP8.59□□□□□ -1.03
LRRK1-205ENST00000526457 MINDY4BA8MYZ0 360 aa8.59□□□□□ -1.03
LRRK1-205ENST00000526457 IFIT3O14879 490 aaKnown RBP8.59□□□□□ -1.03
LRRK1-205ENST00000526457 CCDC159P0C7I6 412 aa8.59□□□□□ -1.03
LRRK1-205ENST00000526457 AMOTQ4VCS5 1084 aa8.59□□□□□ -1.03
LRRK1-205ENST00000526457 GDAP1L1Q96MZ0 367 aa8.59□□□□□ -1.03
LRRK1-205ENST00000526457 EVI5O60447 810 aa8.59□□□□□ -1.04
LRRK1-205ENST00000526457 ZRANB2O95218 330 aaKnown RBP eCLIP8.59□□□□□ -1.04
LRRK1-205ENST00000526457 F13A1P00488 732 aa8.59□□□□□ -1.04
LRRK1-205ENST00000526457 PDE11AQ9HCR9 933 aa8.58□□□□□ -1.04
LRRK1-205ENST00000526457 MICU3Q86XE3 530 aa8.58□□□□□ -1.04
LRRK1-205ENST00000526457 NOX5Q96PH1 765 aa8.58□□□□□ -1.04
LRRK1-205ENST00000526457 CTTNBP2NLQ9P2B4 639 aa8.58□□□□□ -1.04
LRRK1-205ENST00000526457 SKIP12755 728 aa8.58□□□□□ -1.04
LRRK1-205ENST00000526457 CCT6AP40227 531 aaKnown RBP8.58□□□□□ -1.04
LRRK1-205ENST00000526457 IGSF22Q8N9C0 903 aa8.58□□□□□ -1.04
LRRK1-205ENST00000526457 ARMC2Q8NEN0 867 aa8.58□□□□□ -1.04
LRRK1-205ENST00000526457 MAK16Q9BXY0 300 aaKnown RBP8.58□□□□□ -1.04
LRRK1-205ENST00000526457 BOLA2Q9H3K6 86 aa8.58□□□□□ -1.04
LRRK1-205ENST00000526457 ZNF711Q9Y462 761 aa8.58□□□□□ -1.04
LRRK1-205ENST00000526457 MRC2Q9UBG0 1479 aa8.58□□□□□ -1.04
LRRK1-205ENST00000526457 WDR46O15213 610 aaKnown RBP8.58□□□□□ -1.04
LRRK1-205ENST00000526457 MARCKSP29966 332 aaPredicted RBP8.58□□□□□ -1.04
LRRK1-205ENST00000526457 ST13P4Q8IZP2 240 aaPredicted RBP8.58□□□□□ -1.04
LRRK1-205ENST00000526457 SNX21Q969T3 373 aa8.58□□□□□ -1.04
LRRK1-205ENST00000526457 ZNF287Q9HBT7 754 aa8.58□□□□□ -1.04
LRRK1-205ENST00000526457 CUL5Q93034 780 aa8.58□□□□□ -1.04
LRRK1-205ENST00000526457 CYP26C1Q6V0L0 522 aa8.58□□□□□ -1.04
LRRK1-205ENST00000526457 NUTM2AQ8IVF1 878 aaPredicted RBP8.58□□□□□ -1.04
LRRK1-205ENST00000526457 KIAA2013Q8IYS2 634 aa8.58□□□□□ -1.04
LRRK1-205ENST00000526457 PIP4K2CQ8TBX8 421 aa8.58□□□□□ -1.04
LRRK1-205ENST00000526457 NLRP7Q8WX94 980 aa8.58□□□□□ -1.04
LRRK1-205ENST00000526457 BMP15O95972 392 aa8.58□□□□□ -1.04
LRRK1-205ENST00000526457 CNGA1P29973 690 aa8.58□□□□□ -1.04
LRRK1-205ENST00000526457 ZNF280CQ8ND82 737 aa8.58□□□□□ -1.04
LRRK1-205ENST00000526457 SDCCAG3Q96C92 435 aa8.58□□□□□ -1.04
LRRK1-205ENST00000526457 SCHIP1Q9P0W5 487 aaPredicted RBP8.58□□□□□ -1.04
LRRK1-205ENST00000526457 CCDC125Q86Z20 511 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms