RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 GSG1L2A8MUP6 293 aa11.73□□□□□ -0.53
VPS13B-212ENST00000524330 ZSCAN22P10073 491 aaPredicted RBP11.73□□□□□ -0.53
VPS13B-212ENST00000524330 LAMA4Q16363 1823 aa11.73□□□□□ -0.53
VPS13B-212ENST00000524330 LARP1BQ659C4 914 aaKnown RBP11.73□□□□□ -0.53
VPS13B-212ENST00000524330 MB21D2Q8IYB1 491 aaPredicted RBP11.73□□□□□ -0.53
VPS13B-212ENST00000524330 MIGA1Q8NAN2 632 aa11.73□□□□□ -0.53
VPS13B-212ENST00000524330 STAG1Q8WVM7 1258 aa11.73□□□□□ -0.53
VPS13B-212ENST00000524330 ESR2Q92731 530 aa11.73□□□□□ -0.53
VPS13B-212ENST00000524330 ZNF287Q9HBT7 754 aa11.73□□□□□ -0.53
VPS13B-212ENST00000524330 TOMM22Q9NS69 142 aa11.73□□□□□ -0.53
VPS13B-212ENST00000524330 ARPP21Q9UBL0 812 aaPredicted RBP11.73□□□□□ -0.53
VPS13B-212ENST00000524330 ANGEL1Q9UNK9 670 aaKnown RBP11.73□□□□□ -0.53
VPS13B-212ENST00000524330 LRRC37AA6NMS7 1700 aa11.72□□□□□ -0.53
VPS13B-212ENST00000524330 IRS2Q9Y4H2 1338 aa11.72□□□□□ -0.53
VPS13B-212ENST00000524330 H3BQV1 296 aa11.72□□□□□ -0.53
VPS13B-212ENST00000524330 CPLX1O14810 134 aa11.72□□□□□ -0.53
VPS13B-212ENST00000524330 USP5P45974 858 aa11.72□□□□□ -0.53
VPS13B-212ENST00000524330 EVCP57679 992 aa11.72□□□□□ -0.53
VPS13B-212ENST00000524330 PDE4BQ07343 736 aa11.72□□□□□ -0.53
VPS13B-212ENST00000524330 PPARAQ07869 468 aa11.72□□□□□ -0.53
VPS13B-212ENST00000524330 STK3Q13188 491 aa11.72□□□□□ -0.53
VPS13B-212ENST00000524330 CCDC178Q5BJE1 867 aa11.72□□□□□ -0.53
VPS13B-212ENST00000524330 IFFO2Q5TF58 517 aa11.72□□□□□ -0.53
VPS13B-212ENST00000524330 MSL1Q68DK7 614 aa11.72□□□□□ -0.53
VPS13B-212ENST00000524330 NFXL1Q6ZNB6 911 aa11.72□□□□□ -0.53
VPS13B-212ENST00000524330 TCEANC2Q96MN5 208 aa11.72□□□□□ -0.53
VPS13B-212ENST00000524330 RIOK1Q9BRS2 568 aaKnown RBP11.72□□□□□ -0.53
VPS13B-212ENST00000524330 ANAPC4Q9UJX5 808 aa11.72□□□□□ -0.53
VPS13B-212ENST00000524330 MYO5AQ9Y4I1 1855 aaKnown RBP11.72□□□□□ -0.53
VPS13B-212ENST00000524330 COL4A1P02462 1669 aa11.71□□□□□ -0.53
VPS13B-212ENST00000524330 COL1A1P02452 1464 aaPredicted RBP11.71□□□□□ -0.53
VPS13B-212ENST00000524330 FAM205AQ6ZU69 1335 aa11.71□□□□□ -0.53
VPS13B-212ENST00000524330 CCDC69A6NI79 296 aa11.71□□□□□ -0.53
VPS13B-212ENST00000524330 MINDY4BA8MYZ0 360 aa11.71□□□□□ -0.53
VPS13B-212ENST00000524330 FOXP2O15409 715 aa11.71□□□□□ -0.53
VPS13B-212ENST00000524330 TRAK2O60296 914 aa11.71□□□□□ -0.53
VPS13B-212ENST00000524330 SYT1P21579 422 aa11.71□□□□□ -0.53
VPS13B-212ENST00000524330 KLRK1P26718 216 aa11.71□□□□□ -0.53
VPS13B-212ENST00000524330 APOBRQ0VD83 1088 aa11.71□□□□□ -0.53
VPS13B-212ENST00000524330 MCTP1Q6DN14 999 aa11.71□□□□□ -0.53
VPS13B-212ENST00000524330 NECAB1Q8N987 351 aa11.71□□□□□ -0.53
VPS13B-212ENST00000524330 RGS22Q8NE09 1264 aa11.71□□□□□ -0.53
VPS13B-212ENST00000524330 LARP6Q9BRS8 491 aaKnown RBP11.71□□□□□ -0.53
VPS13B-212ENST00000524330 UBAC1Q9BSL1 405 aa11.71□□□□□ -0.53
VPS13B-212ENST00000524330 TAF6LQ9Y6J9 622 aa11.71□□□□□ -0.53
VPS13B-212ENST00000524330 ANKRD31Q8N7Z5 1873 aa11.7□□□□□ -0.54
VPS13B-212ENST00000524330 KIAA1551Q9HCM1 1747 aa11.7□□□□□ -0.54
VPS13B-212ENST00000524330 KLF18A0A0U1RQI7 1052 aa11.7□□□□□ -0.54
VPS13B-212ENST00000524330 CCDC196A0A1B0GTZ2 297 aa11.7□□□□□ -0.54
VPS13B-212ENST00000524330 VPS37CA5D8V6 355 aaPredicted RBP11.7□□□□□ -0.54
VPS13B-212ENST00000524330 IFIT3O14879 490 aaKnown RBP11.7□□□□□ -0.54
VPS13B-212ENST00000524330 LARGE1O95461 756 aa11.7□□□□□ -0.54
VPS13B-212ENST00000524330 MBD3O95983 291 aa11.7□□□□□ -0.54
VPS13B-212ENST00000524330 LIFRP42702 1097 aa11.7□□□□□ -0.54
VPS13B-212ENST00000524330 RCAN1P53805 252 aa11.7□□□□□ -0.54
VPS13B-212ENST00000524330 PPP4CP60510 307 aa11.7□□□□□ -0.54
VPS13B-212ENST00000524330 PPP2R5BQ15173 497 aa11.7□□□□□ -0.54
VPS13B-212ENST00000524330 SBK1Q52WX2 424 aa11.7□□□□□ -0.54
VPS13B-212ENST00000524330 TMEM67Q5HYA8 995 aa11.7□□□□□ -0.54
VPS13B-212ENST00000524330 SOGA3Q5TF21 947 aa11.7□□□□□ -0.54
VPS13B-212ENST00000524330 PODNQ7Z5L7 613 aa11.7□□□□□ -0.54
VPS13B-212ENST00000524330 TXNRD3Q86VQ6 643 aa11.7□□□□□ -0.54
VPS13B-212ENST00000524330 IQCA1Q86XH1 822 aa11.7□□□□□ -0.54
VPS13B-212ENST00000524330 SYAP1Q96A49 352 aaPredicted RBP11.7□□□□□ -0.54
VPS13B-212ENST00000524330 LRRC2Q9BYS8 371 aa11.7□□□□□ -0.54
VPS13B-212ENST00000524330 AATFQ9NY61 560 aaKnown RBP eCLIP11.7□□□□□ -0.54
VPS13B-212ENST00000524330 POLLQ9UGP5 575 aa11.7□□□□□ -0.54
VPS13B-212ENST00000524330 TIAM2Q8IVF5 1701 aa11.69□□□□□ -0.54
VPS13B-212ENST00000524330 MROH7-TTC4A0A0A0MT08 1334 aa11.69□□□□□ -0.54
VPS13B-212ENST00000524330 GOLGA8BA8MQT2 603 aa11.69□□□□□ -0.54
VPS13B-212ENST00000524330 B4E1Z4 1266 aa11.69□□□□□ -0.54
VPS13B-212ENST00000524330 SH2B2O14492 632 aaPredicted RBP11.69□□□□□ -0.54
VPS13B-212ENST00000524330 PRKAB2O43741 272 aa11.69□□□□□ -0.54
VPS13B-212ENST00000524330 F13A1P00488 732 aa11.69□□□□□ -0.54
VPS13B-212ENST00000524330 POLD1P28340 1107 aa11.69□□□□□ -0.54
VPS13B-212ENST00000524330 PRDX5P30044 214 aa11.69□□□□□ -0.54
VPS13B-212ENST00000524330 PDIA3P30101 505 aaKnown RBP11.69□□□□□ -0.54
VPS13B-212ENST00000524330 GSE1Q14687 1217 aa11.69□□□□□ -0.54
VPS13B-212ENST00000524330 WTAPQ15007 396 aa11.69□□□□□ -0.54
VPS13B-212ENST00000524330 RRP12Q5JTH9 1297 aaKnown RBP11.69□□□□□ -0.54
VPS13B-212ENST00000524330 MFSD14BQ5SR56 506 aa11.69□□□□□ -0.54
VPS13B-212ENST00000524330 TBC1D10CQ8IV04 446 aa11.69□□□□□ -0.54
VPS13B-212ENST00000524330 WASF1Q92558 559 aa11.69□□□□□ -0.54
VPS13B-212ENST00000524330 FAM163AQ96GL9 167 aaPredicted RBP11.69□□□□□ -0.54
VPS13B-212ENST00000524330 ZSCAN16Q9H4T2 348 aaPredicted RBP11.69□□□□□ -0.54
VPS13B-212ENST00000524330 ANO8Q9HCE9 1232 aaPredicted RBP11.69□□□□□ -0.54
VPS13B-212ENST00000524330 EPB41L4AQ9HCS5 686 aaPredicted RBP11.69□□□□□ -0.54
VPS13B-212ENST00000524330 SLC12A7Q9Y666 1083 aa11.69□□□□□ -0.54
VPS13B-212ENST00000524330 CACNA1SQ13698 1873 aa11.69□□□□□ -0.54
VPS13B-212ENST00000524330 WTIPA6NIX2 430 aaPredicted RBP11.68□□□□□ -0.54
VPS13B-212ENST00000524330 RIMBP2O15034 1052 aa11.68□□□□□ -0.54
VPS13B-212ENST00000524330 ZBTB43O43298 467 aa11.68□□□□□ -0.54
VPS13B-212ENST00000524330 KDM4AO75164 1064 aa11.68□□□□□ -0.54
VPS13B-212ENST00000524330 CALM1P0DP23 149 aa11.68□□□□□ -0.54
VPS13B-212ENST00000524330 CALM2P0DP24 149 aa11.68□□□□□ -0.54
VPS13B-212ENST00000524330 CALM3P0DP25 149 aa11.68□□□□□ -0.54
VPS13B-212ENST00000524330 METAP2P50579 478 aaKnown RBP eCLIP11.68□□□□□ -0.54
VPS13B-212ENST00000524330 FKBP1AP62942 108 aaKnown RBP11.68□□□□□ -0.54
VPS13B-212ENST00000524330 DYNLL1P63167 89 aaKnown RBP11.68□□□□□ -0.54
VPS13B-212ENST00000524330 CTDSPL2Q05D32 466 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms