RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 ATP2B2Q01814 1243 aa8.08□□□□□ -1.12
SKP1-207ENST00000520417 MAP7Q14244 749 aa8.08□□□□□ -1.12
SKP1-207ENST00000520417 SHISA5Q8N114 240 aa8.08□□□□□ -1.12
SKP1-207ENST00000520417 WDR89Q96FK6 387 aaPredicted RBP8.08□□□□□ -1.12
SKP1-207ENST00000520417 TRAIPQ9BWF2 469 aa8.08□□□□□ -1.12
SKP1-207ENST00000520417 CBX8Q9HC52 389 aa8.08□□□□□ -1.12
SKP1-207ENST00000520417 PIM2Q9P1W9 311 aa8.08□□□□□ -1.12
SKP1-207ENST00000520417 WWC3Q9ULE0 1092 aa8.08□□□□□ -1.12
SKP1-207ENST00000520417 GSTP1P09211 210 aaKnown RBP8.07□□□□□ -1.12
SKP1-207ENST00000520417 SLFN14P0C7P3 912 aa8.07□□□□□ -1.12
SKP1-207ENST00000520417 XRCC5P13010 732 aaKnown RBP8.07□□□□□ -1.12
SKP1-207ENST00000520417 HNRNPUQ00839 825 aaKnown RBP eCLIP8.07□□□□□ -1.12
SKP1-207ENST00000520417 ASB16Q96NS5 453 aa8.07□□□□□ -1.12
SKP1-207ENST00000520417 PIDD1Q9HB75 910 aa8.07□□□□□ -1.12
SKP1-207ENST00000520417 PRKAG2Q9UGJ0 569 aa8.07□□□□□ -1.12
SKP1-207ENST00000520417 PPP1R9AQ9ULJ8 1098 aa8.07□□□□□ -1.12
SKP1-207ENST00000520417 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.06□□□□□ -1.12
SKP1-207ENST00000520417 HOXA10P31260 410 aaPredicted RBP8.06□□□□□ -1.12
SKP1-207ENST00000520417 ADMP35318 185 aa8.06□□□□□ -1.12
SKP1-207ENST00000520417 TPTE2Q6XPS3 522 aa8.06□□□□□ -1.12
SKP1-207ENST00000520417 SULF2Q8IWU5 870 aa8.06□□□□□ -1.12
SKP1-207ENST00000520417 SEMA6CQ9H3T2 930 aa8.06□□□□□ -1.12
SKP1-207ENST00000520417 FAM170BA6NMN3 283 aa8.05□□□□□ -1.12
SKP1-207ENST00000520417 PATL2C9JE40 543 aaKnown RBP8.05□□□□□ -1.12
SKP1-207ENST00000520417 RNGTTO60942 597 aaKnown RBP8.05□□□□□ -1.12
SKP1-207ENST00000520417 FBXO24O75426 580 aa8.05□□□□□ -1.12
SKP1-207ENST00000520417 GSTT1P30711 240 aa8.05□□□□□ -1.12
SKP1-207ENST00000520417 MAP1SQ66K74 1059 aaPredicted RBP8.05□□□□□ -1.12
SKP1-207ENST00000520417 ALG1LQ6GMV1 187 aa8.05□□□□□ -1.12
SKP1-207ENST00000520417 ZAR1Q86SH2 424 aa8.05□□□□□ -1.12
SKP1-207ENST00000520417 EZH1Q92800 747 aaPredicted RBP8.05□□□□□ -1.12
SKP1-207ENST00000520417 ACSBG1Q96GR2 724 aa8.05□□□□□ -1.12
SKP1-207ENST00000520417 LRRC4CQ9HCJ2 640 aa8.05□□□□□ -1.12
SKP1-207ENST00000520417 CYP26A1O43174 497 aa8.04□□□□□ -1.12
SKP1-207ENST00000520417 ZNF862O60290 1169 aa8.04□□□□□ -1.12
SKP1-207ENST00000520417 ID3Q02535 119 aa8.04□□□□□ -1.12
SKP1-207ENST00000520417 FMR1Q06787 632 aaKnown RBP eCLIP8.04□□□□□ -1.12
SKP1-207ENST00000520417 DUSP27Q5VZP5 1158 aa8.04□□□□□ -1.12
SKP1-207ENST00000520417 FBF1Q8TES7 1133 aa8.04□□□□□ -1.12
SKP1-207ENST00000520417 METTL22Q9BUU2 404 aaPredicted RBP8.04□□□□□ -1.12
SKP1-207ENST00000520417 ACSS3Q9H6R3 686 aa8.04□□□□□ -1.12
SKP1-207ENST00000520417 KIAA1324LA8MWY0 1029 aaPredicted RBP8.03□□□□□ -1.12
SKP1-207ENST00000520417 TMPRSS2O15393 492 aa8.03□□□□□ -1.12
SKP1-207ENST00000520417 PDIA4P13667 645 aaKnown RBP8.03□□□□□ -1.12
SKP1-207ENST00000520417 STK35Q8TDR2 534 aa8.03□□□□□ -1.12
SKP1-207ENST00000520417 OSBPL7Q9BZF2 842 aa8.03□□□□□ -1.12
SKP1-207ENST00000520417 ATXN3LQ9H3M9 355 aa8.03□□□□□ -1.12
SKP1-207ENST00000520417 SSU72Q9NP77 194 aaKnown RBP8.03□□□□□ -1.12
SKP1-207ENST00000520417 SPG7Q9UQ90 795 aa8.03□□□□□ -1.12
SKP1-207ENST00000520417 DYNC1LI2O43237 492 aaPredicted RBP8.02□□□□□ -1.13
SKP1-207ENST00000520417 LDHBP07195 334 aaKnown RBP8.02□□□□□ -1.13
SKP1-207ENST00000520417 P4HBP07237 508 aaKnown RBP8.02□□□□□ -1.13
SKP1-207ENST00000520417 NME2P22392 152 aa8.02□□□□□ -1.13
SKP1-207ENST00000520417 ARNTP27540 789 aa8.02□□□□□ -1.13
SKP1-207ENST00000520417 GP2P55259 537 aaKnown RBP8.02□□□□□ -1.13
SKP1-207ENST00000520417 FANCD2OSQ96PS1 177 aa8.02□□□□□ -1.13
SKP1-207ENST00000520417 EMILIN2Q9BXX0 1053 aa8.02□□□□□ -1.13
SKP1-207ENST00000520417 CRIM1Q9NZV1 1036 aa8.02□□□□□ -1.13
SKP1-207ENST00000520417 WNT11O96014 354 aa8.01□□□□□ -1.13
SKP1-207ENST00000520417 HCLS1P14317 486 aaPredicted RBP8.01□□□□□ -1.13
SKP1-207ENST00000520417 FOSL1P15407 271 aa8.01□□□□□ -1.13
SKP1-207ENST00000520417 SPINK2P20155 84 aa8.01□□□□□ -1.13
SKP1-207ENST00000520417 ZNF765Q7L2R6 523 aa8.01□□□□□ -1.13
SKP1-207ENST00000520417 PICK1Q9NRD5 415 aa8.01□□□□□ -1.13
SKP1-207ENST00000520417 KRT82Q9NSB4 513 aa8.01□□□□□ -1.13
SKP1-207ENST00000520417 ANGEL1Q9UNK9 670 aaKnown RBP8.01□□□□□ -1.13
SKP1-207ENST00000520417 SAMM50Q9Y512 469 aa8.01□□□□□ -1.13
SKP1-207ENST00000520417 ADAMTS4O75173 837 aa8□□□□□ -1.13
SKP1-207ENST00000520417 CYP27A1Q02318 531 aa8□□□□□ -1.13
SKP1-207ENST00000520417 TTLL4Q14679 1199 aa8□□□□□ -1.13
SKP1-207ENST00000520417 KIF4BQ2VIQ3 1234 aa8□□□□□ -1.13
SKP1-207ENST00000520417 PDZD3Q86UT5 571 aa8□□□□□ -1.13
SKP1-207ENST00000520417 DTX1Q86Y01 620 aa8□□□□□ -1.13
SKP1-207ENST00000520417 SMYD4Q8IYR2 804 aaPredicted RBP8□□□□□ -1.13
SKP1-207ENST00000520417 C3orf58Q8NDZ4 430 aa8□□□□□ -1.13
SKP1-207ENST00000520417 CEP44Q9C0F1 390 aa8□□□□□ -1.13
SKP1-207ENST00000520417 SRCIN1Q9C0H9 1055 aa8□□□□□ -1.13
SKP1-207ENST00000520417 CSADQ9Y600 493 aa8□□□□□ -1.13
SKP1-207ENST00000520417 CDK5R2Q13319 367 aa7.99□□□□□ -1.13
SKP1-207ENST00000520417 MPRIPQ6WCQ1 1025 aa7.99□□□□□ -1.13
SKP1-207ENST00000520417 GPBAR1Q8TDU6 330 aa7.99□□□□□ -1.13
SKP1-207ENST00000520417 NECAB3Q96P71 396 aaPredicted RBP7.99□□□□□ -1.13
SKP1-207ENST00000520417 GSX1Q9H4S2 264 aaPredicted RBP7.99□□□□□ -1.13
SKP1-207ENST00000520417 DISC1Q9NRI5 854 aa7.99□□□□□ -1.13
SKP1-207ENST00000520417 C1GALT1Q9NS00 363 aa7.99□□□□□ -1.13
SKP1-207ENST00000520417 OAS3Q9Y6K5 1087 aaKnown RBP7.99□□□□□ -1.13
SKP1-207ENST00000520417 GIPC1O14908 333 aa7.98□□□□□ -1.13
SKP1-207ENST00000520417 PAGE1O75459 146 aa7.98□□□□□ -1.13
SKP1-207ENST00000520417 USP17L7P0C7H9 530 aa7.98□□□□□ -1.13
SKP1-207ENST00000520417 IRAK1P51617 712 aa7.98□□□□□ -1.13
SKP1-207ENST00000520417 CPSF6Q16630 551 aaKnown RBP eCLIP7.98□□□□□ -1.13
SKP1-207ENST00000520417 GRIN3AQ8TCU5 1115 aa7.98□□□□□ -1.13
SKP1-207ENST00000520417 GATA6Q92908 595 aa7.98□□□□□ -1.13
SKP1-207ENST00000520417 C12orf49Q9H741 205 aa7.98□□□□□ -1.13
SKP1-207ENST00000520417 TTF2Q9UNY4 1162 aaKnown RBP7.98□□□□□ -1.13
SKP1-207ENST00000520417 SYNGAP1Q96PV0 1343 aa7.98□□□□□ -1.13
SKP1-207ENST00000520417 ENC1O14682 589 aa7.97□□□□□ -1.13
SKP1-207ENST00000520417 FAM87AP0C7U9 286 aa7.97□□□□□ -1.13
SKP1-207ENST00000520417 PSMG3-AS1Q96PY0 264 aa7.97□□□□□ -1.13
SKP1-207ENST00000520417 FAM8A1Q9UBU6 413 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms