RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 CYP8B1Q9UNU6 501 aa10.3□□□□□ -0.76
PTPN12-213ENST00000519553 ZNF862O60290 1169 aa10.29□□□□□ -0.76
PTPN12-213ENST00000519553 RLBP1P12271 317 aa10.29□□□□□ -0.76
PTPN12-213ENST00000519553 TFE3P19532 575 aaPredicted RBP10.29□□□□□ -0.76
PTPN12-213ENST00000519553 PDE3AQ14432 1141 aa10.29□□□□□ -0.76
PTPN12-213ENST00000519553 EXOSC6Q5RKV6 272 aaKnown RBP10.29□□□□□ -0.76
PTPN12-213ENST00000519553 HS2ST1Q7LGA3 356 aa10.29□□□□□ -0.76
PTPN12-213ENST00000519553 METTL16Q86W50 562 aaKnown RBP10.29□□□□□ -0.76
PTPN12-213ENST00000519553 KCNB2Q92953 911 aa10.29□□□□□ -0.76
PTPN12-213ENST00000519553 GAL3ST3Q96A11 431 aa10.29□□□□□ -0.76
PTPN12-213ENST00000519553 RSRP1Q9BUV0 290 aa10.29□□□□□ -0.76
PTPN12-213ENST00000519553 WDR18Q9BV38 432 aa10.29□□□□□ -0.76
PTPN12-213ENST00000519553 SUGCTQ9HAC7 445 aa10.29□□□□□ -0.76
PTPN12-213ENST00000519553 TLR6Q9Y2C9 796 aa10.29□□□□□ -0.76
PTPN12-213ENST00000519553 HDLBPQ00341 1268 aaKnown RBP10.28□□□□□ -0.76
PTPN12-213ENST00000519553 LRRC14Q15048 493 aa10.28□□□□□ -0.76
PTPN12-213ENST00000519553 MEGF10Q96KG7 1140 aa10.28□□□□□ -0.76
PTPN12-213ENST00000519553 RHOVQ96L33 236 aa10.28□□□□□ -0.76
PTPN12-213ENST00000519553 KBTBD4Q9NVX7 518 aa10.28□□□□□ -0.76
PTPN12-213ENST00000519553 E9PSI1 815 aa10.27□□□□□ -0.77
PTPN12-213ENST00000519553 TRIM37O94972 964 aa10.27□□□□□ -0.77
PTPN12-213ENST00000519553 TIAF1O95411 115 aa10.27□□□□□ -0.77
PTPN12-213ENST00000519553 LIG1P18858 919 aa10.27□□□□□ -0.77
PTPN12-213ENST00000519553 KIF4BQ2VIQ3 1234 aa10.27□□□□□ -0.77
PTPN12-213ENST00000519553 HP1BP3Q5SSJ5 553 aaPredicted RBP10.27□□□□□ -0.77
PTPN12-213ENST00000519553 SMG8Q8ND04 991 aaKnown RBP10.27□□□□□ -0.77
PTPN12-213ENST00000519553 GPBAR1Q8TDU6 330 aa10.27□□□□□ -0.77
PTPN12-213ENST00000519553 SSBP4Q9BWG4 385 aaPredicted RBP10.27□□□□□ -0.77
PTPN12-213ENST00000519553 IGSF5Q9NSI5 407 aa10.27□□□□□ -0.77
PTPN12-213ENST00000519553 GGT7Q9UJ14 662 aa10.27□□□□□ -0.77
PTPN12-213ENST00000519553 PCDHB5Q9Y5E4 795 aa10.27□□□□□ -0.77
PTPN12-213ENST00000519553 PCDHGC5Q9Y5F6 944 aa10.27□□□□□ -0.77
PTPN12-213ENST00000519553 AOC2O75106 756 aa10.26□□□□□ -0.77
PTPN12-213ENST00000519553 PTPN11Q06124 597 aaPredicted RBP10.26□□□□□ -0.77
PTPN12-213ENST00000519553 NUTM2GQ5VZR2 741 aa10.26□□□□□ -0.77
PTPN12-213ENST00000519553 ANKRD34AQ69YU3 496 aa10.26□□□□□ -0.77
PTPN12-213ENST00000519553 SCARA3Q6AZY7 606 aa10.26□□□□□ -0.77
PTPN12-213ENST00000519553 DZIP1LQ8IYY4 767 aaKnown RBP10.26□□□□□ -0.77
PTPN12-213ENST00000519553 RNF34Q969K3 372 aa10.26□□□□□ -0.77
PTPN12-213ENST00000519553 TMEM74Q96NL1 305 aa10.26□□□□□ -0.77
PTPN12-213ENST00000519553 UBL7Q96S82 380 aaPredicted RBP10.26□□□□□ -0.77
PTPN12-213ENST00000519553 GLB1P16278 677 aa10.25□□□□□ -0.77
PTPN12-213ENST00000519553 CYP4F12Q9HCS2 524 aa10.25□□□□□ -0.77
PTPN12-213ENST00000519553 SYNGAP1Q96PV0 1343 aa10.25□□□□□ -0.77
PTPN12-213ENST00000519553 PROCP04070 461 aa10.24□□□□□ -0.77
PTPN12-213ENST00000519553 ADH5P11766 374 aa10.24□□□□□ -0.77
PTPN12-213ENST00000519553 TCF3P15923 654 aa10.24□□□□□ -0.77
PTPN12-213ENST00000519553 GBP2P32456 591 aaPredicted RBP10.24□□□□□ -0.77
PTPN12-213ENST00000519553 PREPP48147 710 aa10.24□□□□□ -0.77
PTPN12-213ENST00000519553 PWP1Q13610 501 aa10.24□□□□□ -0.77
PTPN12-213ENST00000519553 SEPT6Q14141 434 aa10.24□□□□□ -0.77
PTPN12-213ENST00000519553 FDX2Q6P4F2 183 aa10.24□□□□□ -0.77
PTPN12-213ENST00000519553 GATA4P43694 442 aa10.23□□□□□ -0.77
PTPN12-213ENST00000519553 LMNB2Q03252 620 aa10.23□□□□□ -0.77
PTPN12-213ENST00000519553 ZNF394Q53GI3 561 aa10.23□□□□□ -0.77
PTPN12-213ENST00000519553 RELL1Q8IUW5 271 aa10.23□□□□□ -0.77
PTPN12-213ENST00000519553 TRIM42Q8IWZ5 723 aa10.23□□□□□ -0.77
PTPN12-213ENST00000519553 FAM46AQ96IP4 442 aaKnown RBP10.23□□□□□ -0.77
PTPN12-213ENST00000519553 CEP41Q9BYV8 373 aa10.23□□□□□ -0.77
PTPN12-213ENST00000519553 TMPRSS2O15393 492 aa10.22□□□□□ -0.77
PTPN12-213ENST00000519553 PF4P02776 101 aa10.22□□□□□ -0.77
PTPN12-213ENST00000519553 DRD2P14416 443 aa10.22□□□□□ -0.77
PTPN12-213ENST00000519553 GARTP22102 1010 aa10.22□□□□□ -0.77
PTPN12-213ENST00000519553 SOX4Q06945 474 aaPredicted RBP10.22□□□□□ -0.77
PTPN12-213ENST00000519553 CAMK2GQ13555 558 aaPredicted RBP10.22□□□□□ -0.77
PTPN12-213ENST00000519553 AKAP4Q5JQC9 854 aa10.22□□□□□ -0.77
PTPN12-213ENST00000519553 C9orf131Q5VYM1 1079 aa10.22□□□□□ -0.77
PTPN12-213ENST00000519553 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.22□□□□□ -0.77
PTPN12-213ENST00000519553 ACSBG1Q96GR2 724 aa10.22□□□□□ -0.77
PTPN12-213ENST00000519553 KCNQ5Q9NR82 932 aa10.22□□□□□ -0.77
PTPN12-213ENST00000519553 PPP1R9AQ9ULJ8 1098 aa10.22□□□□□ -0.77
PTPN12-213ENST00000519553 PCDHGB7Q9Y5F8 929 aa10.22□□□□□ -0.77
PTPN12-213ENST00000519553 MINDY4BA8MYZ0 360 aa10.21□□□□□ -0.77
PTPN12-213ENST00000519553 NT5DC4Q86YG4 428 aa10.21□□□□□ -0.77
PTPN12-213ENST00000519553 C12orf50Q8NA57 414 aaPredicted RBP10.21□□□□□ -0.77
PTPN12-213ENST00000519553 C2CD4AQ8NCU7 369 aaPredicted RBP10.21□□□□□ -0.77
PTPN12-213ENST00000519553 MIR1-1HGQ9H1L0 117 aa10.21□□□□□ -0.77
PTPN12-213ENST00000519553 RAD18Q9NS91 495 aa10.21□□□□□ -0.77
PTPN12-213ENST00000519553 RACK1P63244 317 aaKnown RBP10.2□□□□□ -0.78
PTPN12-213ENST00000519553 FAM160A1Q05DH4 1040 aa10.2□□□□□ -0.78
PTPN12-213ENST00000519553 RAD51AP2Q09MP3 1159 aa10.2□□□□□ -0.78
PTPN12-213ENST00000519553 ZC3H12AQ5D1E8 599 aaKnown RBP10.2□□□□□ -0.78
PTPN12-213ENST00000519553 USP48Q86UV5 1035 aa10.2□□□□□ -0.78
PTPN12-213ENST00000519553 ARMC10Q8N2F6 343 aa10.2□□□□□ -0.78
PTPN12-213ENST00000519553 SPOCK3Q9BQ16 436 aa10.2□□□□□ -0.78
PTPN12-213ENST00000519553 GSX1Q9H4S2 264 aaPredicted RBP10.2□□□□□ -0.78
PTPN12-213ENST00000519553 CRIM1Q9NZV1 1036 aa10.2□□□□□ -0.78
PTPN12-213ENST00000519553 ADAMTS1Q9UHI8 967 aa10.2□□□□□ -0.78
PTPN12-213ENST00000519553 PCDHA4Q9UN74 947 aa10.2□□□□□ -0.78
PTPN12-213ENST00000519553 AP4E1Q9UPM8 1137 aa10.2□□□□□ -0.78
PTPN12-213ENST00000519553 CDK8P49336 464 aa10.19□□□□□ -0.78
PTPN12-213ENST00000519553 HNRNPUQ00839 825 aaKnown RBP eCLIP10.19□□□□□ -0.78
PTPN12-213ENST00000519553 ID3Q02535 119 aa10.19□□□□□ -0.78
PTPN12-213ENST00000519553 UVSSAQ2YD98 709 aa10.19□□□□□ -0.78
PTPN12-213ENST00000519553 FBXL19Q6PCT2 694 aa10.19□□□□□ -0.78
PTPN12-213ENST00000519553 BNC2Q6ZN30 1099 aaPredicted RBP10.19□□□□□ -0.78
PTPN12-213ENST00000519553 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.19□□□□□ -0.78
PTPN12-213ENST00000519553 CCDC84Q86UT8 332 aaPredicted RBP10.19□□□□□ -0.78
PTPN12-213ENST00000519553 DDX41Q9UJV9 622 aaKnown RBP10.19□□□□□ -0.78
PTPN12-213ENST00000519553 ACTL7BQ9Y614 415 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms