RNA–Protein interactions for RNA: ENST00000519542.1

GABRA1-205, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 3

Gene GABRA1, Length 572 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-205ENST00000519542 SF3B2Q13435 895 aaKnown RBP5.68□□□□□ -1.5
GABRA1-205ENST00000519542 RNF43Q68DV7 783 aa5.68□□□□□ -1.5
GABRA1-205ENST00000519542 ANKRD34AQ69YU3 496 aa5.68□□□□□ -1.5
GABRA1-205ENST00000519542 GJD3Q8N144 294 aa5.68□□□□□ -1.5
GABRA1-205ENST00000519542 BSNDQ8WZ55 320 aa5.68□□□□□ -1.5
GABRA1-205ENST00000519542 RNF208Q9H0X6 261 aa5.68□□□□□ -1.5
GABRA1-205ENST00000519542 PCMTD2Q9NV79 361 aa5.68□□□□□ -1.5
GABRA1-205ENST00000519542 MYO5CQ9NQX4 1742 aa5.68□□□□□ -1.5
GABRA1-205ENST00000519542 PRR19A6NJB7 356 aa5.67□□□□□ -1.5
GABRA1-205ENST00000519542 FAM177BA6PVY3 158 aa5.67□□□□□ -1.5
GABRA1-205ENST00000519542 PHACTR2O75167 634 aa5.67□□□□□ -1.5
GABRA1-205ENST00000519542 NLRP12P59046 1061 aa5.67□□□□□ -1.5
GABRA1-205ENST00000519542 C19orf57Q0VDD7 668 aa5.67□□□□□ -1.5
GABRA1-205ENST00000519542 CLEC10AQ8IUN9 316 aa5.67□□□□□ -1.5
GABRA1-205ENST00000519542 FAM83CQ9BQN1 747 aa5.67□□□□□ -1.5
GABRA1-205ENST00000519542 RUSC1Q9BVN2 902 aa5.67□□□□□ -1.5
GABRA1-205ENST00000519542 LATS2Q9NRM7 1088 aa5.67□□□□□ -1.5
GABRA1-205ENST00000519542 CCDC87Q9NVE4 849 aa5.67□□□□□ -1.5
GABRA1-205ENST00000519542 KIAA1522Q9P206 1035 aaPredicted RBP5.67□□□□□ -1.5
GABRA1-205ENST00000519542 CDC42BPBQ9Y5S2 1711 aa5.67□□□□□ -1.5
GABRA1-205ENST00000519542 PREX2Q70Z35 1606 aa5.66□□□□□ -1.5
GABRA1-205ENST00000519542 MADDQ8WXG6 1647 aa5.66□□□□□ -1.5
GABRA1-205ENST00000519542 COBLO75128 1261 aa5.66□□□□□ -1.5
GABRA1-205ENST00000519542 EDN3P14138 238 aa5.66□□□□□ -1.5
GABRA1-205ENST00000519542 SPINK2P20155 84 aa5.66□□□□□ -1.5
GABRA1-205ENST00000519542 USP5P45974 858 aa5.66□□□□□ -1.5
GABRA1-205ENST00000519542 FKBP4Q02790 459 aaKnown RBP eCLIP5.66□□□□□ -1.5
GABRA1-205ENST00000519542 EHHADHQ08426 723 aa5.66□□□□□ -1.5
GABRA1-205ENST00000519542 ECM1Q16610 540 aa5.66□□□□□ -1.5
GABRA1-205ENST00000519542 TXNDC2Q86VQ3 553 aa5.66□□□□□ -1.5
GABRA1-205ENST00000519542 SLC7A3Q8WY07 619 aa5.66□□□□□ -1.5
GABRA1-205ENST00000519542 DBNDD2Q9BQY9 259 aa5.66□□□□□ -1.5
GABRA1-205ENST00000519542 TMPRSS13Q9BYE2 586 aa5.66□□□□□ -1.5
GABRA1-205ENST00000519542 SOX17Q9H6I2 414 aaPredicted RBP5.66□□□□□ -1.5
GABRA1-205ENST00000519542 HIF3AQ9Y2N7 669 aa5.66□□□□□ -1.5
GABRA1-205ENST00000519542 KDM5CP41229 1560 aa5.66□□□□□ -1.5
GABRA1-205ENST00000519542 HECW2Q9P2P5 1572 aa5.66□□□□□ -1.5
GABRA1-205ENST00000519542 CDC42BPAQ5VT25 1732 aa5.65□□□□□ -1.5
GABRA1-205ENST00000519542 LOC100289279A0A1B0GTE1 492 aa5.65□□□□□ -1.5
GABRA1-205ENST00000519542 EIF5BO60841 1220 aaKnown RBP5.65□□□□□ -1.5
GABRA1-205ENST00000519542 ADAMTS4O75173 837 aa5.65□□□□□ -1.5
GABRA1-205ENST00000519542 TIAF1O95411 115 aa5.65□□□□□ -1.5
GABRA1-205ENST00000519542 DLGAP3O95886 979 aa5.65□□□□□ -1.5
GABRA1-205ENST00000519542 ESRRAP11474 423 aaPredicted RBP5.65□□□□□ -1.5
GABRA1-205ENST00000519542 BMP3P12645 472 aa5.65□□□□□ -1.5
GABRA1-205ENST00000519542 DNAJC14Q6Y2X3 702 aaPredicted RBP5.65□□□□□ -1.5
GABRA1-205ENST00000519542 TTC16Q8NEE8 873 aa5.65□□□□□ -1.5
GABRA1-205ENST00000519542 NRSN2Q9GZP1 204 aa5.65□□□□□ -1.5
GABRA1-205ENST00000519542 SUGCTQ9HAC7 445 aa5.65□□□□□ -1.5
GABRA1-205ENST00000519542 ZFYVE28Q9HCC9 887 aa5.65□□□□□ -1.5
GABRA1-205ENST00000519542 ABCA6Q8N139 1617 aa5.64□□□□□ -1.51
GABRA1-205ENST00000519542 ITSN2Q9NZM3 1697 aa5.64□□□□□ -1.51
GABRA1-205ENST00000519542 ARL4DP49703 201 aa5.64□□□□□ -1.51
GABRA1-205ENST00000519542 ZNF211Q13398 564 aaPredicted RBP5.64□□□□□ -1.51
GABRA1-205ENST00000519542 IKBKEQ14164 716 aa5.64□□□□□ -1.51
GABRA1-205ENST00000519542 MCTP1Q6DN14 999 aa5.64□□□□□ -1.51
GABRA1-205ENST00000519542 BEND4Q6ZU67 534 aa5.64□□□□□ -1.51
GABRA1-205ENST00000519542 SMG8Q8ND04 991 aaKnown RBP5.64□□□□□ -1.51
GABRA1-205ENST00000519542 BCL2L13Q9BXK5 485 aa5.64□□□□□ -1.51
GABRA1-205ENST00000519542 FMN1Q68DA7 1419 aa5.64□□□□□ -1.51
GABRA1-205ENST00000519542 POGZQ7Z3K3 1410 aa5.64□□□□□ -1.51
GABRA1-205ENST00000519542 FANCAO15360 1455 aa5.64□□□□□ -1.51
GABRA1-205ENST00000519542 FYCO1Q9BQS8 1478 aa5.64□□□□□ -1.51
GABRA1-205ENST00000519542 ABCC1P33527 1531 aa5.64□□□□□ -1.51
GABRA1-205ENST00000519542 TCF3P15923 654 aa5.63□□□□□ -1.51
GABRA1-205ENST00000519542 ZNF16P17020 682 aaPredicted RBP5.63□□□□□ -1.51
GABRA1-205ENST00000519542 DTX1Q86Y01 620 aa5.63□□□□□ -1.51
GABRA1-205ENST00000519542 SHKBP1Q8TBC3 707 aa5.63□□□□□ -1.51
GABRA1-205ENST00000519542 ANO2Q9NQ90 1003 aa5.63□□□□□ -1.51
GABRA1-205ENST00000519542 EGFL7Q9UHF1 273 aa5.63□□□□□ -1.51
GABRA1-205ENST00000519542 CASKIN1Q8WXD9 1431 aa5.63□□□□□ -1.51
GABRA1-205ENST00000519542 YEATS2Q9ULM3 1422 aa5.63□□□□□ -1.51
GABRA1-205ENST00000519542 DIP2CQ9Y2E4 1556 aa5.63□□□□□ -1.51
GABRA1-205ENST00000519542 RIMS1Q86UR5 1692 aaKnown RBP5.63□□□□□ -1.51
GABRA1-205ENST00000519542 METTL12A8MUP2 240 aa5.62□□□□□ -1.51
GABRA1-205ENST00000519542 SART1O43290 800 aaKnown RBP5.62□□□□□ -1.51
GABRA1-205ENST00000519542 ICMTO60725 284 aa5.62□□□□□ -1.51
GABRA1-205ENST00000519542 ABL1P00519 1130 aa5.62□□□□□ -1.51
GABRA1-205ENST00000519542 MAP4P27816 1152 aaKnown RBP5.62□□□□□ -1.51
GABRA1-205ENST00000519542 AAMPQ13685 434 aa5.62□□□□□ -1.51
GABRA1-205ENST00000519542 SGO2Q562F6 1265 aa5.62□□□□□ -1.51
GABRA1-205ENST00000519542 FDX2Q6P4F2 183 aa5.62□□□□□ -1.51
GABRA1-205ENST00000519542 INTS5Q6P9B9 1019 aaKnown RBP5.62□□□□□ -1.51
GABRA1-205ENST00000519542 KRTAP1-3Q8IUG1 177 aa5.62□□□□□ -1.51
GABRA1-205ENST00000519542 CCNJLQ8IV13 435 aa5.62□□□□□ -1.51
GABRA1-205ENST00000519542 GALNT12Q8IXK2 581 aa5.62□□□□□ -1.51
GABRA1-205ENST00000519542 FAM9AQ8IZU1 332 aaPredicted RBP5.62□□□□□ -1.51
GABRA1-205ENST00000519542 TCF12Q99081 682 aa5.62□□□□□ -1.51
GABRA1-205ENST00000519542 OAS3Q9Y6K5 1087 aaKnown RBP5.62□□□□□ -1.51
GABRA1-205ENST00000519542 PHLDB1Q86UU1 1377 aa5.62□□□□□ -1.51
GABRA1-205ENST00000519542 TROQ12816 1431 aaPredicted RBP5.62□□□□□ -1.51
GABRA1-205ENST00000519542 AKNAQ7Z591 1439 aa5.62□□□□□ -1.51
GABRA1-205ENST00000519542 ZFYVE16Q7Z3T8 1539 aa5.62□□□□□ -1.51
GABRA1-205ENST00000519542 ARHGEF12Q9NZN5 1544 aa5.62□□□□□ -1.51
GABRA1-205ENST00000519542 REREQ9P2R6 1566 aa5.62□□□□□ -1.51
GABRA1-205ENST00000519542 FER1L4A9Z1Z3 1794 aa5.62□□□□□ -1.51
GABRA1-205ENST00000519542 A0A1W2PP55 124 aa5.61□□□□□ -1.51
GABRA1-205ENST00000519542 PLCH2O75038 1416 aa5.61□□□□□ -1.51
GABRA1-205ENST00000519542 DENND4BO75064 1496 aaPredicted RBP5.61□□□□□ -1.51
GABRA1-205ENST00000519542 POLR3DP05423 398 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms